Basic Statistics
Measure | Value |
---|---|
Filename | 002005_Nocton-Soy_GAGTGG_L002_R1_008.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 4000000 |
Filtered Sequences | 0 |
Sequence length | 101 |
%GC | 63 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per base GC content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Kmer Content
Sequence | Count | Obs/Exp Overall | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AAAAA | 249200 | 3.3086438 | 4.0146317 | 70-74 |
TTTTT | 243455 | 3.2438471 | 3.7062893 | 95-97 |
GATCG | 1277220 | 3.0832896 | 4.509067 | 1 |
CGATC | 1258900 | 3.0652897 | 3.517245 | 1 |
ATCGA | 708250 | 3.027375 | 3.6353555 | 2 |
TCGAT | 704930 | 3.015321 | 3.374526 | 3 |