##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002005_Nocton-Soy_GAGTGG_L002_R1_007.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 63 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.74940375 34.0 31.0 34.0 31.0 34.0 2 33.00162025 34.0 31.0 34.0 31.0 34.0 3 33.0515245 34.0 31.0 34.0 31.0 34.0 4 36.4522135 37.0 37.0 37.0 35.0 37.0 5 36.380739 37.0 37.0 37.0 35.0 37.0 6 36.3568165 37.0 37.0 37.0 35.0 37.0 7 36.357139 37.0 37.0 37.0 35.0 37.0 8 36.342054 37.0 37.0 37.0 35.0 37.0 9 38.137624 39.0 39.0 39.0 37.0 39.0 10-14 38.37610995 39.4 38.6 39.4 36.2 39.4 15-19 39.52426825 41.0 40.0 41.0 37.0 41.0 20-24 39.07867555 40.8 38.8 41.0 35.4 41.0 25-29 37.1642394 40.0 36.2 41.0 28.6 41.0 30-34 33.7283863 37.8 28.0 40.2 20.4 41.0 35-39 36.24275395 37.6 35.0 40.0 30.8 41.0 40-44 26.837960450000004 26.2 23.2 30.6 16.8 38.8 45-49 31.9501849 33.0 30.6 35.6 25.4 38.4 50-54 32.387746 35.0 32.0 35.4 22.0 38.6 55-59 29.787413400000002 34.0 26.6 35.0 16.0 36.0 60-64 32.3946785 35.0 33.0 35.0 26.0 35.4 65-69 32.4198225 35.0 33.0 35.0 26.6 35.0 70-74 31.3257028 35.0 31.8 35.0 21.2 35.0 75-79 31.10524075 34.4 31.8 35.0 22.2 35.0 80-84 31.2623853 35.0 32.0 35.0 23.2 35.0 85-89 30.415872049999997 34.6 31.0 35.0 19.0 35.0 90-94 30.658048 34.6 31.2 35.0 21.6 35.0 95-99 30.41345005 35.0 31.4 35.0 18.6 35.0 100-101 29.046924124999997 33.5 29.0 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 40.0 3 18.0 4 55.0 5 173.0 6 533.0 7 1745.0 8 4401.0 9 7104.0 10 8579.0 11 10201.0 12 10979.0 13 9314.0 14 8042.0 15 8194.0 16 8576.0 17 8808.0 18 9968.0 19 11040.0 20 12419.0 21 14301.0 22 17765.0 23 22383.0 24 28869.0 25 36752.0 26 46422.0 27 57723.0 28 72488.0 29 93812.0 30 124130.0 31 178479.0 32 298065.0 33 559329.0 34 883481.0 35 815222.0 36 459897.0 37 144455.0 38 24165.0 39 2067.0 40 6.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.758555429742046 18.77535720144521 16.795544934761473 28.67054243405127 2 32.4283 21.919674999999998 19.839875000000003 25.81215 3 29.714374999999997 19.699225000000002 20.307475 30.278925 4 31.99665 18.60825 18.9056 30.489500000000003 5 32.16145 18.82865 18.912925 30.096974999999997 6 31.291725 18.0279 17.53785 33.142525 7 33.3108 17.934175 17.9588 30.796225 8 30.618174999999997 18.538025 18.784200000000002 32.059599999999996 9 31.423875000000002 17.45335 18.4576 32.665175000000005 10-14 31.69419 18.338905 18.362975000000002 31.603930000000002 15-19 31.827855 18.038075 18.200084999999998 31.933985 20-24 32.038331541039334 18.08430896978521 18.180386328484364 31.696973160691094 25-29 32.129657578914724 18.089301574226884 18.045991247233918 31.735049599624475 30-34 32.63835230170292 17.98034151905109 17.843644362830634 31.53766181641535 35-39 31.998273487673924 18.1126215732426 18.09356812647408 31.7955368126094 40-44 39.09866408535445 16.584097342799595 16.1354001081478 28.181838463698156 45-49 32.13298 17.976085 17.985885 31.905050000000003 50-54 32.23627700417727 18.093156895916806 18.03128663296819 31.639279466937737 55-59 32.216459742916705 18.47573003045709 17.94502756410318 31.362782662523024 60-64 32.24810763431186 17.99355129460176 17.876519863388822 31.88182120769756 65-69 32.008473502453356 18.0556168106336 18.009602996088375 31.926306690824667 70-74 32.11562 18.20971 17.93225 31.74242 75-79 32.234365 18.08419 17.852915 31.82853 80-84 32.0450729307115 18.027627280119113 17.994572184259333 31.932727604910056 85-89 32.16545033821645 18.15301456573904 17.978695934022042 31.70283916202247 90-94 32.197431818304565 17.860567705217196 17.86786890407405 32.07413157240419 95-99 32.07933028726331 17.930129723142695 17.967999764799742 32.02254022479425 100-101 32.411525000000005 17.957862499999997 17.859975 31.7706375 >>END_MODULE >>Per base GC content warn #Base %GC 1 64.42909786379332 2 58.240449999999996 3 59.993300000000005 4 62.486149999999995 5 62.258424999999995 6 64.43425 7 64.107025 8 62.677775000000004 9 64.08905 10-14 63.298120000000004 15-19 63.76184000000001 20-24 63.73530470173042 25-29 63.86470717853919 30-34 64.17601411811827 35-39 63.793810300283326 40-44 67.28050254905261 45-49 64.03803 50-54 63.875556471115004 55-59 63.57924240543973 60-64 64.12992884200942 65-69 63.934780193278016 70-74 63.85804 75-79 64.062895 80-84 63.977800535621554 85-89 63.868289500238916 90-94 64.27156339070875 95-99 64.10187051205757 100-101 64.18216249999999 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2.0 1 2.5 2 3.0 3 3.5 4 2.5 5 4.0 6 5.5 7 6.5 8 9.0 9 11.5 10 12.5 11 14.0 12 17.5 13 21.5 14 31.5 15 50.5 16 64.0 17 81.5 18 118.5 19 141.0 20 170.5 21 225.5 22 311.0 23 406.0 24 528.5 25 717.5 26 899.0 27 1156.0 28 1526.0 29 1933.5 30 2340.0 31 2877.0 32 3544.5 33 4273.5 34 5046.5 35 5895.5 36 6805.5 37 7716.0 38 8699.5 39 9693.5 40 10741.0 41 11884.0 42 12922.0 43 14009.0 44 15497.5 45 17413.5 46 19561.5 47 22338.5 48 25886.5 49 29902.0 50 34947.5 51 41090.5 52 47804.5 53 55634.0 54 64738.0 55 74225.0 56 84764.5 57 96305.5 58 108644.5 59 122261.0 60 136662.0 61 151370.0 62 166061.5 63 180642.0 64 193677.0 65 204373.5 66 212243.5 67 215509.5 68 213995.5 69 207916.0 70 197035.5 71 181298.5 72 162010.5 73 140825.5 74 118632.0 75 96084.5 76 74680.5 77 56095.0 78 40366.0 79 27678.0 80 18187.0 81 11440.5 82 6794.5 83 3881.5 84 2285.0 85 1429.0 86 926.0 87 603.5 88 428.5 89 305.5 90 202.0 91 145.5 92 105.0 93 72.5 94 45.0 95 25.5 96 14.5 97 8.0 98 5.0 99 2.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0284 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-14 0.0 15-19 0.0 20-24 0.002455 25-29 7.549999999999999E-4 30-34 3.278895 35-39 0.018090000000000002 40-44 1.8380400000000001 45-49 0.0 50-54 4.25E-4 55-59 1.6501649999999999 60-64 0.01404 65-69 0.008289999999999999 70-74 0.0 75-79 0.0 80-84 2.9E-4 85-89 0.00782 90-94 0.01642 95-99 1.1E-4 100-101 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.029495723120146432 #Duplication Level Relative count 1 100.0 2 0.010001500225033755 3 5.000750112516877E-4 4 5.000750112516877E-4 5 0.0010001500225033755 6 0.0 7 0.0 8 0.0 9 5.000750112516877E-4 10++ 0.002500375056258439 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position AAAAA 231970 3.1508255 4.0003285 70-74 TTTTT 223305 3.1224983 3.8716412 95-97 GATCG 1233295 3.0006568 4.438575 1 >>END_MODULE