##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002005_Nocton-Soy_GAGTGG_L002_R1_006.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 63 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.7093845 34.0 31.0 34.0 31.0 34.0 2 32.95856125 34.0 31.0 34.0 31.0 34.0 3 32.90001475 34.0 31.0 34.0 31.0 34.0 4 36.3826805 37.0 37.0 37.0 35.0 37.0 5 36.33713325 37.0 37.0 37.0 35.0 37.0 6 36.325386 37.0 37.0 37.0 35.0 37.0 7 36.3259865 37.0 37.0 37.0 35.0 37.0 8 36.25785275 37.0 37.0 37.0 35.0 37.0 9 38.0962425 39.0 39.0 39.0 37.0 39.0 10-14 38.0483604 39.4 38.4 39.4 35.8 39.4 15-19 39.136542199999994 41.0 39.0 41.0 35.6 41.0 20-24 39.04309775 40.6 38.8 41.0 35.8 41.0 25-29 36.6751346 39.6 35.8 41.0 26.8 41.0 30-34 34.0604407 38.0 31.8 40.2 18.8 41.0 35-39 34.814624099999996 36.8 33.8 40.0 25.8 41.0 40-44 28.43888235 27.6 22.8 37.4 14.8 40.2 45-49 31.375165900000002 33.6 29.8 35.6 20.8 39.4 50-54 32.41936844999999 35.0 32.4 35.2 21.8 38.6 55-59 30.92989635 35.0 30.4 35.0 18.0 36.4 60-64 32.61744215 35.0 33.0 35.0 26.6 35.4 65-69 31.325816349999997 35.0 31.6 35.0 21.2 35.0 70-74 30.5565164 34.6 30.0 35.0 19.2 35.0 75-79 31.031644850000003 34.4 31.6 35.0 22.8 35.0 80-84 31.550354699999996 35.0 32.8 35.0 24.4 35.0 85-89 31.4291703 35.0 33.0 35.0 24.0 35.0 90-94 30.9710889 35.0 32.4 35.0 22.8 35.0 95-99 29.61395685 34.6 30.4 35.0 9.4 35.0 100-101 27.059109499999998 33.5 26.5 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 37.0 3 11.0 4 63.0 5 184.0 6 593.0 7 1841.0 8 5216.0 9 8888.0 10 10329.0 11 11176.0 12 11133.0 13 9673.0 14 9267.0 15 9788.0 16 9778.0 17 9780.0 18 10758.0 19 12007.0 20 13330.0 21 14931.0 22 18434.0 23 23827.0 24 31067.0 25 39986.0 26 51863.0 27 67707.0 28 88843.0 29 116069.0 30 151743.0 31 213885.0 32 327135.0 33 495231.0 34 650251.0 35 673603.0 36 634350.0 37 227822.0 38 36276.0 39 3110.0 40 15.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.64757340470459 18.763384923971756 16.86368524634761 28.725356424976038 2 32.36605 21.958775 19.837725 25.83745 3 30.200100000000003 19.622 20.19 29.9879 4 31.956275 18.662699999999997 18.928449999999998 30.452575 5 32.070775000000005 18.848625 18.986925 30.093674999999998 6 31.29925 18.032149999999998 17.572775 33.095825 7 33.324725 17.946375 17.9747 30.754199999999997 8 30.733874999999998 18.559875 18.777325 31.928925000000003 9 31.422175000000003 17.4997 18.43615 32.641975 10-14 31.8336 18.381785 18.30708 31.477535 15-19 31.85521 18.02769 18.162770000000002 31.95433 20-24 31.946015933814692 18.102567525708633 18.21151967751363 31.739896862963047 25-29 32.63115334620467 18.11478559180789 17.98601386992401 31.268047192063424 30-34 33.37860643208207 18.040191644944432 17.56055395781392 31.020647965159576 35-39 32.77235654857428 18.121980407561527 17.87667735687613 31.228985686988064 40-44 37.24433658888055 17.36438483963831 16.651348683801455 28.73992988767969 45-49 32.41742 18.072575 17.985415 31.524590000000003 50-54 32.45967232862318 18.300696045800454 17.987245685332535 31.252385940243833 55-59 32.34041308510327 18.456679614169904 17.94423948605987 31.25866781466695 60-64 32.1206537899853 17.927331342049953 17.912293950352804 32.039720917611945 65-69 32.139680494981995 18.335741551629344 17.95399373771565 31.570584215673016 70-74 32.357658624704214 18.299759655145035 17.904486670630746 31.438095049519998 75-79 32.24356 17.960665000000002 17.890045 31.90573 80-84 31.996951955041336 17.976065146960917 18.011965676493727 32.01501722150402 85-89 32.11060405407047 18.000137116927085 17.944425239295793 31.94483358970665 90-94 32.216988025161356 17.83870471176758 17.84855696497789 32.09575029809317 95-99 32.06829840592119 17.97286707983154 18.011502535729925 31.947331978517347 100-101 32.6588125 18.2979625 17.755499999999998 31.287725 >>END_MODULE >>Per base GC content warn #Base %GC 1 64.37292982968063 2 58.2035 3 60.187999999999995 4 62.40885 5 62.16445 6 64.395075 7 64.078925 8 62.6628 9 64.06415 10-14 63.31113499999999 15-19 63.80954 20-24 63.685912796777735 25-29 63.8992005382681 30-34 64.39925439724165 35-39 64.00134223556235 40-44 65.98426647656024 45-49 63.94201 50-54 63.71205826886701 55-59 63.59908089977022 60-64 64.16037470759724 65-69 63.710264710655004 70-74 63.79575367422422 75-79 64.14929000000001 80-84 64.01196917654536 85-89 64.05543764377713 90-94 64.31273832325452 95-99 64.01563038443854 100-101 63.9465375 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 4.0 1 2.0 2 2.0 3 2.5 4 2.0 5 1.5 6 5.5 7 7.5 8 6.0 9 12.0 10 15.0 11 13.5 12 23.0 13 28.5 14 29.5 15 40.5 16 59.5 17 87.5 18 115.0 19 145.0 20 187.5 21 243.5 22 306.0 23 393.0 24 532.5 25 702.0 26 901.0 27 1168.5 28 1469.0 29 1888.5 30 2349.5 31 2826.0 32 3432.0 33 4181.0 34 5037.5 35 5858.0 36 6640.0 37 7590.0 38 8644.0 39 9597.5 40 10575.0 41 11487.5 42 12514.0 43 13932.5 44 15541.0 45 17291.5 46 19374.0 47 22089.5 48 25381.5 49 29337.0 50 34345.0 51 40298.5 52 47010.0 53 54643.5 54 63552.5 55 73247.5 56 83422.0 57 94902.5 58 107565.0 59 120635.0 60 135125.0 61 150464.5 62 165457.5 63 179300.0 64 192113.0 65 203033.0 66 211108.5 67 215327.5 68 214365.0 69 208877.0 70 198373.0 71 183013.5 72 164086.5 73 142752.0 74 120246.5 75 97943.0 76 76863.0 77 57889.0 78 41964.0 79 29208.0 80 19312.0 81 12273.0 82 7426.0 83 4398.0 84 2648.5 85 1604.0 86 995.0 87 637.0 88 440.5 89 346.5 90 261.0 91 173.0 92 118.5 93 75.5 94 42.5 95 24.0 96 11.5 97 7.0 98 3.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.015775 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-14 0.0 15-19 0.0 20-24 0.0019749999999999998 25-29 0.00522 30-34 0.062065 35-39 0.01755 40-44 1.4937749999999999 45-49 0.0 50-54 1.15E-4 55-59 2.4999999999999998E-5 60-64 0.015905 65-69 0.012525000000000001 70-74 0.00202 75-79 0.0 80-84 0.001475 85-89 0.012344999999999998 90-94 0.02287 95-99 0.00118 100-101 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.05949048152295872 #Duplication Level Relative count 1 100.0 2 0.040517625166947624 3 5.002175946536743E-4 4 5.002175946536743E-4 5 0.0 6 5.002175946536743E-4 7 5.002175946536743E-4 8 0.0 9 0.0 10++ 0.0010004351893073487 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position TTTTT 230425 3.187342 4.0528326 90-94 AAAAA 239970 3.148285 3.8532398 70-74 >>END_MODULE