Basic Statistics
Measure | Value |
---|---|
Filename | 002005_Nocton-Soy_GAGTGG_L002_R1_005.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 4000000 |
Filtered Sequences | 0 |
Sequence length | 101 |
%GC | 63 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per base GC content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Kmer Content
Sequence | Count | Obs/Exp Overall | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AAAAA | 255920 | 3.3700182 | 3.8918226 | 65-69 |
TTTTT | 250525 | 3.3395083 | 3.9432166 | 95-97 |
GATCG | 1274520 | 3.06869 | 4.482823 | 1 |
CGATC | 1247525 | 3.0438159 | 3.5449183 | 1 |
ATCGA | 710535 | 3.029983 | 3.9270196 | 2 |
TCGAT | 702930 | 3.0048826 | 3.4971468 | 3 |