##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002005_Nocton-Soy_GAGTGG_L002_R1_005.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 63 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.72328425 34.0 31.0 34.0 31.0 34.0 2 32.96246275 34.0 31.0 34.0 31.0 34.0 3 32.99267625 34.0 31.0 34.0 31.0 34.0 4 36.411974 37.0 37.0 37.0 35.0 37.0 5 36.349605 37.0 37.0 37.0 35.0 37.0 6 36.32074675 37.0 37.0 37.0 35.0 37.0 7 36.32600525 37.0 37.0 37.0 35.0 37.0 8 36.30317275 37.0 37.0 37.0 35.0 37.0 9 38.1072615 39.0 39.0 39.0 37.0 39.0 10-14 38.28451425 39.4 38.6 39.4 36.2 39.4 15-19 39.4641319 41.0 39.8 41.0 36.8 41.0 20-24 39.2013936 40.8 39.0 41.0 35.8 41.0 25-29 38.2425289 40.0 37.8 41.0 33.4 41.0 30-34 36.679239100000004 39.2 35.4 41.0 29.6 41.0 35-39 36.4495117 38.2 35.0 40.2 31.4 41.0 40-44 35.28794275 35.8 35.0 39.4 30.0 41.0 45-49 34.81127205 35.0 35.0 38.0 30.8 40.8 50-54 33.94017725 35.0 34.2 35.6 29.8 39.4 55-59 32.851544000000004 35.0 33.0 35.0 26.2 37.0 60-64 32.76012179999999 35.0 33.0 35.0 26.8 35.6 65-69 32.37270065 35.0 33.0 35.0 26.4 35.0 70-74 32.0712937 35.0 33.0 35.0 25.8 35.0 75-79 31.4414987 34.4 32.2 35.0 24.0 35.0 80-84 31.705889149999997 35.0 33.0 35.0 24.8 35.0 85-89 31.25883685 35.0 32.6 35.0 22.6 35.0 90-94 30.95641705 35.0 32.0 35.0 22.8 35.0 95-99 30.40837 35.0 31.6 35.0 16.4 35.0 100-101 28.91196275 34.0 29.0 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 31.0 3 16.0 4 48.0 5 144.0 6 477.0 7 1369.0 8 3425.0 9 5375.0 10 6466.0 11 7177.0 12 7458.0 13 7780.0 14 8349.0 15 8709.0 16 9509.0 17 10132.0 18 11202.0 19 11848.0 20 12718.0 21 14056.0 22 16213.0 23 19422.0 24 23977.0 25 29655.0 26 36755.0 27 45307.0 28 56241.0 29 69545.0 30 86747.0 31 112450.0 32 151042.0 33 223705.0 34 389893.0 35 821205.0 36 1215636.0 37 484604.0 38 83396.0 39 7897.0 40 21.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 35.67155833262895 18.772103649768653 16.834534784911575 28.721803232690817 2 32.438050000000004 21.921125 19.835625 25.8052 3 29.801925 19.686675 20.279075 30.232325 4 31.961925 18.6204 18.945600000000002 30.472074999999997 5 32.16615 18.818075 18.92785 30.087925 6 31.2839 18.034375 17.566825 33.114900000000006 7 33.2778 17.957975 18.00065 30.763575 8 30.622775 18.5385 18.758775 32.079950000000004 9 31.48125 17.461175 18.468675 32.588899999999995 10-14 31.743475871737935 18.337974168987085 18.36414918207459 31.554400777200385 15-19 31.80189 18.060615 18.2149 31.922594999999998 20-24 31.774200822670117 18.108187730709087 18.24389439990112 31.873717046719673 25-29 32.118569706180786 18.167808363872677 18.183993678677048 31.529628251269486 30-34 32.526919437893774 18.041606985335587 17.841818024024597 31.589655552746045 35-39 32.02573469032174 18.079256076852 18.097749734897565 31.797259497928692 40-44 32.283018484889304 18.110168304186587 17.97484252577585 31.631970685148257 45-49 32.147484999999996 17.92995 17.937805 31.98476 50-54 32.04157 18.062549999999998 18.05054 31.84534 55-59 32.29551 18.15474 17.954665 31.595085 60-64 32.17436148644324 17.940516747529315 17.900917185659786 31.98420458036766 65-69 32.07210074126019 18.055687997759403 18.01484440556547 31.85736685541493 70-74 32.189060000000005 18.106995 17.941745 31.7622 75-79 32.201570000000004 17.929485 17.870035 31.998910000000002 80-84 32.023184271871244 17.966030694695153 17.991295773016898 32.019489260416705 85-89 32.19235315080671 18.069640081886917 17.95037291989384 31.78763384741254 90-94 32.21353696819182 17.840029395492184 17.85752647414513 32.08890716217086 95-99 32.10392909885967 17.935586090813235 17.951196165741596 32.009288644585496 100-101 32.5046375 18.0928875 17.81115 31.591324999999998 >>END_MODULE >>Per base GC content warn #Base %GC 1 64.39336156531978 2 58.24325 3 60.03425 4 62.434 5 62.254075 6 64.3988 7 64.041375 8 62.702725 9 64.07015 10-14 63.29787664893832 15-19 63.724484999999994 20-24 63.647917869389794 25-29 63.64819795745027 30-34 64.11657499063982 35-39 63.82299418825043 40-44 63.914989170037565 45-49 64.132245 50-54 63.88691 55-59 63.890595 60-64 64.15856606681089 65-69 63.929467596675124 70-74 63.95126 75-79 64.20048 80-84 64.04267353228795 85-89 63.97998699821924 90-94 64.30244413036269 95-99 64.11321774344518 100-101 64.0959625 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 5.0 1 4.5 2 4.0 3 3.0 4 4.0 5 6.0 6 7.5 7 8.5 8 7.0 9 15.0 10 21.5 11 23.0 12 32.5 13 34.0 14 44.5 15 60.5 16 77.0 17 89.0 18 117.0 19 176.5 20 229.0 21 276.0 22 377.5 23 490.0 24 619.5 25 812.0 26 1077.0 27 1376.5 28 1704.5 29 2134.0 30 2639.5 31 3248.5 32 3928.0 33 4641.0 34 5341.0 35 6048.0 36 6952.5 37 8011.0 38 9041.5 39 10017.5 40 11099.5 41 12196.5 42 13179.5 43 14302.5 44 15851.5 45 17658.5 46 19740.0 47 22453.0 48 25848.5 49 29939.0 50 35087.5 51 41087.0 52 47675.5 53 55268.5 54 63964.0 55 73707.0 56 84037.0 57 94693.0 58 106699.0 59 120046.5 60 133545.0 61 147851.5 62 162632.5 63 176559.5 64 189576.0 65 200270.0 66 208412.5 67 212965.0 68 211997.5 69 206554.5 70 197024.0 71 182891.5 72 164962.0 73 143998.0 74 121499.0 75 99499.0 76 78736.0 77 59843.0 78 43300.0 79 30095.0 80 20261.0 81 12943.5 82 7838.5 83 4556.0 84 2715.0 85 1690.0 86 1101.0 87 756.5 88 508.0 89 372.5 90 272.0 91 198.5 92 133.0 93 84.0 94 50.0 95 32.0 96 21.5 97 12.0 98 5.5 99 2.0 100 0.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.030650000000000004 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-14 4.9999999999999996E-5 15-19 0.0 20-24 0.0012300000000000002 25-29 0.001945 30-34 0.042025 35-39 0.019780000000000002 40-44 0.00427 45-49 0.0 50-54 0.0 55-59 0.0 60-64 0.011519999999999999 65-69 0.008794999999999999 70-74 0.0 75-79 0.0 80-84 3.1E-4 85-89 0.006005 90-94 0.01188 95-99 4.7999999999999996E-4 100-101 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.15796287872350076 #Duplication Level Relative count 1 100.0 2 0.12266498440402342 3 0.008511447897422033 4 5.006734057307078E-4 5 0.0015020202171921234 6 0.0 7 0.0 8 0.0 9 0.0 10++ 0.0015020202171921234 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position AAAAA 255920 3.3700182 3.8918226 65-69 TTTTT 250525 3.3395083 3.9432166 95-97 GATCG 1274520 3.06869 4.482823 1 CGATC 1247525 3.0438159 3.5449183 1 ATCGA 710535 3.029983 3.9270196 2 TCGAT 702930 3.0048826 3.4971468 3 >>END_MODULE