Basic Statistics
Measure | Value |
---|---|
Filename | 002005_Nocton-Soy_GAGTGG_L002_R1_004.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 4000000 |
Filtered Sequences | 0 |
Sequence length | 101 |
%GC | 63 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per base GC content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Kmer Content
Sequence | Count | Obs/Exp Overall | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AAAAA | 235270 | 3.14276 | 3.7308886 | 1 |
TTTTT | 234100 | 3.1118293 | 3.4585342 | 10-14 |
GATCG | 1282505 | 3.1018164 | 4.571345 | 1 |
CGATC | 1269515 | 3.0861123 | 3.5232618 | 1 |
ATCGA | 715900 | 3.0648003 | 3.8484533 | 2 |
TCGAT | 711560 | 3.0432336 | 3.492147 | 5 |