##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002005_Nocton-Soy_GAGTGG_L002_R1_004.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 63 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.83564175 34.0 31.0 34.0 31.0 34.0 2 33.05802975 34.0 31.0 34.0 31.0 34.0 3 33.08706125 34.0 33.0 34.0 31.0 34.0 4 36.46488875 37.0 37.0 37.0 35.0 37.0 5 36.3984205 37.0 37.0 37.0 35.0 37.0 6 36.35458475 37.0 37.0 37.0 35.0 37.0 7 36.3510605 37.0 37.0 37.0 35.0 37.0 8 36.33618525 37.0 37.0 37.0 35.0 37.0 9 38.12996775 39.0 39.0 39.0 37.0 39.0 10-14 38.395673050000006 39.4 38.8 39.4 37.0 39.4 15-19 39.52867825 41.0 40.0 41.0 37.0 41.0 20-24 39.278053549999996 40.8 39.0 41.0 35.8 41.0 25-29 38.78350415 40.0 38.2 41.0 35.0 41.0 30-34 37.965547300000004 39.8 36.8 41.0 33.4 41.0 35-39 36.846569 38.2 35.0 40.4 32.4 41.0 40-44 35.913288550000004 36.2 35.0 39.8 31.8 41.0 45-49 35.22478995 35.0 35.0 38.0 31.8 40.8 50-54 34.41128155 35.0 34.8 35.8 31.0 39.4 55-59 33.82159145 35.0 34.0 35.0 30.6 37.4 60-64 33.38127195 35.0 33.8 35.0 30.0 35.6 65-69 33.03371995 35.0 33.0 35.0 29.0 35.0 70-74 32.76561335 35.0 33.0 35.0 29.0 35.0 75-79 32.10311505 34.4 32.6 35.0 26.8 35.0 80-84 32.4095801 35.0 33.0 35.0 27.0 35.0 85-89 32.080554649999996 35.0 33.0 35.0 27.0 35.0 90-94 31.67174635 35.0 33.0 35.0 25.6 35.0 95-99 31.110175650000002 35.0 32.8 35.0 23.8 35.0 100-101 29.842535125 34.0 30.5 35.0 17.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 32.0 3 13.0 4 52.0 5 125.0 6 343.0 7 1010.0 8 2237.0 9 3373.0 10 4197.0 11 4781.0 12 4941.0 13 5095.0 14 5602.0 15 5905.0 16 6700.0 17 7494.0 18 7947.0 19 8696.0 20 9375.0 21 10774.0 22 12565.0 23 15415.0 24 19524.0 25 24566.0 26 30664.0 27 38531.0 28 47391.0 29 58642.0 30 73301.0 31 93276.0 32 122212.0 33 171362.0 34 286319.0 35 736430.0 36 1454626.0 37 612542.0 38 103953.0 39 9967.0 40 22.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 35.644066360102336 18.76600231060802 16.817536219818276 28.772395109471365 2 32.450275 21.89895 19.810475 25.8403 3 29.758325000000003 19.66895 20.266375 30.30635 4 31.953274999999998 18.621175 18.89545 30.530099999999997 5 32.165025 18.823725 18.9195 30.09175 6 31.260624999999997 18.0108 17.539975 33.1886 7 33.355050000000006 17.921625 17.931525 30.791800000000002 8 30.7029 18.540425 18.764325 31.992350000000002 9 31.46955 17.4188 18.439474999999998 32.672174999999996 10-14 31.691871445652165 18.32251107088773 18.34561609745851 31.640001386001593 15-19 31.80847 18.04695 18.199535 31.945045 20-24 31.758364999999998 18.085205 18.231625 31.924805 25-29 31.883791145518682 18.170756696423883 18.15850605816563 31.786946099891804 30-34 31.996433336953555 17.979091378381497 18.030753364019695 31.993721920645253 35-39 31.89108512303495 18.05272462224356 18.124282681589392 31.931907573132097 40-44 32.00319565848055 18.082660912694703 18.059515489133453 31.854627939691298 45-49 32.073875 17.906605 17.955170000000003 32.064350000000005 50-54 31.919760000000004 18.00118 18.064555 32.014505 55-59 32.050585 18.047295 18.013840000000002 31.88828 60-64 32.11283788474531 17.882910702935515 17.92191365971776 32.08233775260141 65-69 31.964002408775627 17.983610722652692 18.053803324670543 31.998583543901137 70-74 32.069379999999995 18.03407 17.991445 31.905105 75-79 32.134765 17.890125 17.874914999999998 32.100195 80-84 31.96894344717236 17.978538926946346 18.017390869543476 32.03512675633782 85-89 32.099170341399166 17.99758973756526 17.973224051832496 31.930015869203075 90-94 32.16387023430664 17.839808963827256 17.88016258904297 32.11615821282312 95-99 32.04820935151325 17.931133012572403 17.9892654302689 32.031392205645446 100-101 32.31367220508308 17.994107411611175 17.899280989214837 31.792939394090915 >>END_MODULE >>Per base GC content warn #Base %GC 1 64.4164614695737 2 58.290575 3 60.064675 4 62.483374999999995 5 62.256775 6 64.449225 7 64.14685 8 62.69525 9 64.14172500000001 10-14 63.331872831653754 15-19 63.75351500000001 20-24 63.68317 25-29 63.67073724541049 30-34 63.9901552575988 35-39 63.82299269616705 40-44 63.85782359817185 45-49 64.138225 50-54 63.934265 55-59 63.938865 60-64 64.19517563734672 65-69 63.96258595267676 70-74 63.974485 75-79 64.23496 80-84 64.00407020351018 85-89 64.02918621060223 90-94 64.28002844712978 95-99 64.0796015571587 100-101 64.10661159917399 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 3.0 1 2.5 2 5.0 3 5.5 4 4.0 5 5.5 6 5.5 7 7.0 8 9.5 9 9.5 10 9.5 11 18.0 12 28.5 13 27.5 14 41.5 15 65.0 16 79.0 17 103.5 18 145.5 19 169.0 20 216.0 21 290.0 22 367.0 23 459.5 24 602.0 25 844.5 26 1102.5 27 1388.0 28 1730.5 29 2125.0 30 2628.0 31 3247.0 32 3926.5 33 4692.0 34 5556.5 35 6443.5 36 7215.5 37 7967.5 38 8892.0 39 9939.0 40 10956.0 41 11883.5 42 12999.5 43 14355.5 44 15703.0 45 17334.5 46 19725.0 47 22634.0 48 26013.0 49 30055.0 50 34926.5 51 41146.0 52 48072.0 53 55438.0 54 64067.5 55 73390.0 56 83424.0 57 94587.0 58 106449.0 59 119192.0 60 132865.0 61 147460.5 62 162055.0 63 176062.0 64 188874.0 65 199520.5 66 207405.5 67 211689.5 68 211818.0 69 207361.0 70 198154.0 71 183958.0 72 166106.0 73 145360.5 74 123287.0 75 101214.5 76 79797.5 77 60530.0 78 44096.0 79 30555.5 80 19953.5 81 12515.0 82 7375.5 83 4049.0 84 2162.5 85 1171.5 86 668.5 87 407.5 88 272.0 89 189.5 90 124.5 91 72.5 92 55.5 93 44.0 94 18.5 95 11.5 96 8.5 97 2.5 98 1.0 99 0.5 100 0.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0046749999999999995 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-14 1.15E-4 15-19 0.0 20-24 0.0 25-29 0.00521 30-34 0.052235 35-39 0.01825 40-44 0.00183 45-49 0.0 50-54 0.0 55-59 0.0 60-64 0.03322 65-69 0.0322 70-74 0.0 75-79 0.0 80-84 0.0050 85-89 0.023335 90-94 0.046155 95-99 0.01276 100-101 0.0015 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.20043586052462925 #Duplication Level Relative count 1 100.0 2 0.1607708989647556 3 0.0050084392200858445 4 0.001001687844017169 5 5.008439220085844E-4 6 0.0 7 0.0 8 0.0 9 5.008439220085844E-4 10++ 0.001001687844017169 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position AAAAA 235270 3.14276 3.7308886 1 TTTTT 234100 3.1118293 3.4585342 10-14 GATCG 1282505 3.1018164 4.571345 1 CGATC 1269515 3.0861123 3.5232618 1 ATCGA 715900 3.0648003 3.8484533 2 TCGAT 711560 3.0432336 3.492147 5 >>END_MODULE