Basic Statistics
Measure | Value |
---|---|
Filename | 002005_Nocton-Soy_GAGTGG_L002_R1_003.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 4000000 |
Filtered Sequences | 0 |
Sequence length | 101 |
%GC | 63 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per base GC content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Kmer Content
Sequence | Count | Obs/Exp Overall | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AAAAA | 242600 | 3.2272403 | 4.0903068 | 1 |
TTTTT | 237305 | 3.1647596 | 3.555242 | 10-14 |
GATCG | 1279825 | 3.0948837 | 4.4237604 | 1 |
CGATC | 1263625 | 3.0720305 | 3.4585814 | 6 |
ATCGA | 710320 | 3.0381374 | 3.737135 | 2 |
TCGAT | 707080 | 3.0258029 | 3.4464524 | 5 |