Basic Statistics
Measure | Value |
---|---|
Filename | 002005_Nocton-Soy_GAGTGG_L002_R1_002.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 4000000 |
Filtered Sequences | 0 |
Sequence length | 101 |
%GC | 63 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per base GC content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Kmer Content
Sequence | Count | Obs/Exp Overall | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AAAAA | 239385 | 3.1952634 | 4.0653467 | 1 |
TTTTT | 237500 | 3.1523325 | 3.4430783 | 90-94 |
GATCG | 1280555 | 3.095388 | 4.4829407 | 1 |
CGATC | 1262975 | 3.0712602 | 3.4449396 | 1 |
ATCGA | 713015 | 3.0513034 | 3.8056803 | 2 |
TCGAT | 705675 | 3.0164993 | 3.347474 | 5 |