Basic Statistics
Measure | Value |
---|---|
Filename | 002005_Nocton-Soy_GAGTGG_L002_R1_001.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 4000000 |
Filtered Sequences | 0 |
Sequence length | 101 |
%GC | 63 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per base GC content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Kmer Content
Sequence | Count | Obs/Exp Overall | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AAAAA | 237145 | 3.157431 | 3.8371456 | 1 |
TTTTT | 236385 | 3.1332753 | 3.48126 | 10-14 |
GATCG | 1278515 | 3.0898926 | 4.3654857 | 1 |
CGATC | 1260755 | 3.0653129 | 3.5636644 | 1 |
ATCGA | 709750 | 3.0346587 | 3.7009974 | 2 |
TCGAT | 705670 | 3.0145175 | 3.3848882 | 5 |