##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002004_Nocton-Corn_CGTACG_L003_R2_005.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 61 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.515234 34.0 31.0 34.0 31.0 34.0 2 32.68806875 34.0 31.0 34.0 31.0 34.0 3 32.71449575 34.0 31.0 34.0 31.0 34.0 4 36.1220135 37.0 37.0 37.0 35.0 37.0 5 36.10937475 37.0 37.0 37.0 35.0 37.0 6 36.11001475 37.0 37.0 37.0 35.0 37.0 7 36.11040525 37.0 37.0 37.0 35.0 37.0 8 36.08392375 37.0 37.0 37.0 35.0 37.0 9 37.82933425 39.0 39.0 39.0 35.0 39.0 10-14 38.10134455 39.4 38.4 39.4 35.4 39.4 15-19 39.2515527 41.0 39.6 41.0 36.2 41.0 20-24 39.03370205 41.0 39.0 41.0 35.6 41.0 25-29 38.64459695000001 40.2 38.4 41.0 35.0 41.0 30-34 37.97528685 40.0 37.2 41.0 33.4 41.0 35-39 36.98237025 38.8 35.2 40.8 32.6 41.0 40-44 36.071483799999996 37.0 35.0 40.0 31.6 41.0 45-49 35.141542400000006 35.0 35.0 39.0 30.8 41.0 50-54 33.830571 34.8 33.2 36.2 28.8 39.8 55-59 33.99434724999999 35.0 34.8 35.2 30.4 39.2 60-64 33.652401350000005 35.0 34.4 35.0 30.0 37.2 65-69 33.303607750000005 35.0 34.0 35.0 29.6 36.0 70-74 33.00798404999999 35.0 33.8 35.0 29.0 35.0 75-79 32.739029599999995 35.0 33.0 35.0 29.0 35.0 80-84 32.41268635 35.0 33.0 35.0 27.0 35.0 85-89 32.09146955 35.0 33.0 35.0 27.0 35.0 90-94 31.697455100000003 35.0 33.0 35.0 25.2 35.0 95-99 31.13900615 35.0 33.0 35.0 23.6 35.0 100-101 29.971491125 34.0 30.5 35.0 17.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 10410.0 3 1761.0 4 1951.0 5 2255.0 6 2921.0 7 3549.0 8 4130.0 9 4665.0 10 4982.0 11 5081.0 12 5117.0 13 5104.0 14 5250.0 15 5329.0 16 5668.0 17 6491.0 18 7149.0 19 8177.0 20 9407.0 21 11273.0 22 13478.0 23 16123.0 24 20024.0 25 24213.0 26 29630.0 27 36024.0 28 43895.0 29 54726.0 30 67851.0 31 86560.0 32 114523.0 33 160861.0 34 266062.0 35 642275.0 36 1355778.0 37 721207.0 38 197249.0 39 38610.0 40 241.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 30.6423283306405 23.022520631976032 19.00588383188308 27.32926720550039 2 30.717037132011743 23.573285626351964 22.08054760188778 23.629129639748516 3 29.358347235417586 21.73515540368297 21.040184744551393 27.86631261634805 4 31.213525465412996 20.5211393613609 19.426568422201807 28.8387667510243 5 30.73107672616277 19.826006007615053 19.444752550807713 29.99816471541446 6 30.17443613915346 19.04165868883191 18.359156489452364 32.42474868256227 7 32.05920899814174 18.906415200884275 19.148534618095606 29.88584118287838 8 29.600247182019814 19.298976568286285 19.830823537777636 31.269952711916265 9 30.426948813371634 18.271530059557424 19.540659341209714 31.760861785861227 10-14 30.58689401535939 19.262734432818007 19.39162862456103 30.758742927261572 15-19 30.66664191021948 19.15043980812686 19.296971617550724 30.885946664102942 20-24 30.64351430573236 19.127854537391386 19.339545235228233 30.889085921648025 25-29 30.721164123897037 19.237839009615364 19.24721958496032 30.793777281527273 30-34 30.81274710975427 19.121440368349933 19.151158600670637 30.914653921225167 35-39 30.726575296846182 19.171356388831047 19.236695120043844 30.865373194278934 40-44 30.803994529513613 19.222098876225317 19.1657553274391 30.80815126682197 45-49 30.849565473927086 19.09507773210313 19.124889468983937 30.930467324985845 50-54 30.74772969649191 19.17655474785737 19.192984090403005 30.882731465247716 55-59 30.785545618462134 19.218218621557813 19.19579825774464 30.800437502235408 60-64 30.832392790208825 19.149914682367758 19.107959617337407 30.909732910086014 65-69 30.724839999999997 19.20982 19.22314 30.8422 70-74 30.791415 19.264095 19.20127 30.743219999999997 75-79 30.828870015545107 19.18337085600495 19.12964203051257 30.85811709793737 80-84 30.72894683252804 19.234951192570403 19.228274902711203 30.807827072190346 85-89 30.810682782317855 19.268305622099373 19.211944976769985 30.709066618812784 90-94 30.856396706264594 19.170776085842924 19.139740752213086 30.8330864556794 95-99 30.76160069991692 19.220987386513777 19.227343085005042 30.79006882856426 100-101 30.91352859745556 19.323374473876903 19.17225258009254 30.590844348575004 >>END_MODULE >>Per base GC content warn #Base %GC 1 57.971595536140896 2 54.34616677176026 3 57.22465985176564 4 60.052292216437294 5 60.72924144157723 6 62.599184821715724 7 61.94505018102012 8 60.87019989393608 9 62.18781059923286 10-14 61.34563694262096 15-19 61.55258857432242 20-24 61.532600227380385 25-29 61.51494140542432 30-34 61.727401030979436 35-39 61.591948491125116 40-44 61.61214579633558 45-49 61.780032798912934 50-54 61.630461161739625 55-59 61.58598312069754 60-64 61.742125700294835 65-69 61.56703999999999 70-74 61.534635 75-79 61.68698711348248 80-84 61.53677390471839 85-89 61.51974940113064 90-94 61.68948316194399 95-99 61.55166952848118 100-101 61.504372946030564 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 70.0 1 52.0 2 32.5 3 30.5 4 31.0 5 36.5 6 45.0 7 53.5 8 69.0 9 81.5 10 107.5 11 145.0 12 167.5 13 211.5 14 269.0 15 317.0 16 413.5 17 504.5 18 602.5 19 766.0 20 961.0 21 1185.0 22 1509.5 23 1950.5 24 2420.5 25 2941.5 26 3648.0 27 4481.5 28 5437.5 29 6644.0 30 7887.0 31 9190.5 32 10682.0 33 12300.0 34 13666.5 35 14986.5 36 16612.0 37 17924.5 38 19051.5 39 20205.5 40 21330.0 41 22428.5 42 23444.5 43 24511.5 44 25886.0 45 27537.5 46 29559.0 47 32229.5 48 35502.0 49 39993.5 50 45316.5 51 51102.0 52 58331.5 53 66883.5 54 75877.5 55 85126.0 56 95266.0 57 106225.5 58 117594.5 59 129907.5 60 142171.0 61 154216.5 62 166383.0 63 177464.5 64 187164.5 65 194174.0 66 197946.0 67 198570.0 68 194830.0 69 186482.5 70 173602.5 71 156969.0 72 137572.5 73 116181.5 74 94731.0 75 73791.0 76 54603.5 77 38384.5 78 25301.0 79 15779.5 80 9174.0 81 4961.5 82 2552.5 83 1393.0 84 882.5 85 602.5 86 448.5 87 353.0 88 294.0 89 255.0 90 209.0 91 173.0 92 142.5 93 116.0 94 96.0 95 76.5 96 72.0 97 68.0 98 50.0 99 29.0 100 18.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.1671 2 0.16835 3 0.16485 4 0.157225 5 0.151725 6 0.113875 7 0.12160000000000001 8 0.15455 9 0.167775 10-14 0.10411000000000001 15-19 0.09336499999999999 20-24 0.06174 25-29 0.059435 30-34 0.095 35-39 0.06692999999999999 40-44 0.041795 45-49 0.039369999999999995 50-54 0.056865 55-59 0.046225 60-64 1.55E-4 65-69 0.0 70-74 0.0 75-79 0.00712 80-84 0.01932 85-89 0.001145 90-94 0.001075 95-99 0.01099 100-101 0.0144875 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.3502233235743828 #Duplication Level Relative count 1 100.0 2 0.2561955709751977 3 0.006517695543400332 4 0.002506805978230897 5 5.013611956461794E-4 6 0.0010027223912923587 7 0.0 8 0.0010027223912923587 9 5.013611956461794E-4 10++ 0.004010889565169435 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position AAAAA 389865 3.744558 4.3209786 60-64 TTTTT 370610 3.6139076 4.083575 10-14 >>END_MODULE