##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002004_Nocton-Corn_CGTACG_L002_R2_010.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 310019 Filtered Sequences 0 Sequence length 101 %GC 61 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.159790206406704 33.0 31.0 34.0 30.0 34.0 2 32.32435753937662 34.0 31.0 34.0 30.0 34.0 3 32.37321906076724 34.0 31.0 34.0 30.0 34.0 4 35.764749902425336 37.0 35.0 37.0 35.0 37.0 5 35.835177843938595 37.0 35.0 37.0 35.0 37.0 6 35.81326305807063 37.0 36.0 37.0 35.0 37.0 7 35.7340808144017 37.0 35.0 37.0 35.0 37.0 8 35.752453881858855 37.0 35.0 37.0 35.0 37.0 9 37.48425419087217 39.0 38.0 39.0 35.0 39.0 10-14 37.638560862398755 39.2 37.6 39.4 34.6 39.4 15-19 38.68634890119638 40.0 38.0 41.0 34.4 41.0 20-24 38.41900206116399 40.0 38.0 41.0 33.6 41.0 25-29 38.01369657988704 40.0 37.8 41.0 33.0 41.0 30-34 37.30400781887562 39.6 36.2 41.0 32.0 41.0 35-39 36.23296959218628 38.2 35.0 40.2 30.6 41.0 40-44 35.288333295701236 36.2 34.8 39.8 29.4 41.0 45-49 34.50895203197223 35.0 34.0 38.4 28.6 41.0 50-54 33.23435853931533 34.8 32.6 36.2 26.2 39.2 55-59 33.37377322035101 35.0 33.0 35.0 27.0 38.8 60-64 33.016257713236925 35.0 33.0 35.0 27.0 36.8 65-69 32.66940929426906 35.0 33.0 35.0 26.4 35.8 70-74 32.31536454217322 35.0 33.0 35.0 26.0 35.0 75-79 32.012817924062716 35.0 33.0 35.0 25.6 35.0 80-84 31.660949812753415 35.0 33.0 35.0 24.0 35.0 85-89 31.333622132837018 35.0 32.6 35.0 24.0 35.0 90-94 30.85019821365787 35.0 31.6 35.0 21.8 35.0 95-99 30.19807431157445 34.4 31.0 35.0 15.0 35.0 100-101 28.68770462455527 33.5 29.0 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 536.0 3 153.0 4 185.0 5 242.0 6 295.0 7 416.0 8 509.0 9 623.0 10 632.0 11 593.0 12 630.0 13 613.0 14 574.0 15 593.0 16 630.0 17 719.0 18 812.0 19 942.0 20 1093.0 21 1290.0 22 1506.0 23 1891.0 24 2303.0 25 2667.0 26 3168.0 27 3854.0 28 4632.0 29 5605.0 30 6695.0 31 8454.0 32 10914.0 33 15024.0 34 24043.0 35 53910.0 36 94180.0 37 44343.0 38 12586.0 39 2150.0 40 14.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 30.69701417902021 23.00259706741084 19.111835207200816 27.188553546368137 2 30.72635249563711 23.519924129277005 22.04863855277886 23.705084822307025 3 29.313921265634125 21.760183754383362 21.030134299420283 27.895760680562233 4 31.202818319073984 20.544113661879138 19.41143070987057 28.84163730917631 5 30.62431855278353 19.818259237037182 19.417616660537675 30.13980554964161 6 30.09345131144738 19.12090606159335 18.243489537130525 32.54215308982874 7 31.978619630714444 18.814918517180423 19.18975239029174 30.016709461813395 8 29.604743210505774 19.229615388337457 19.877677813942533 31.287963587214236 9 30.292931574023292 18.333709713843273 19.54511726941317 31.828241442720262 10-14 30.622190767491837 19.288036371073204 19.38197046108348 30.70780240035148 15-19 30.672874754600098 19.185223942127237 19.285867739856428 30.856033563416236 20-24 30.651927785071237 19.170631477425577 19.32771862369726 30.849722113805928 25-29 30.774952502911113 19.262819375586655 19.236756456862324 30.725471664639908 30-34 30.746805171077934 19.146071532943722 19.164328619822292 30.942794676156048 35-39 30.738021663258262 19.22662555077447 19.21694869330168 30.818404092665585 40-44 30.769727016731235 19.24436889351943 19.21133865988859 30.77456542986075 45-49 30.894687099822914 19.11211893464594 19.108183691967266 30.88501027356388 50-54 30.693409113634974 19.231789019382685 19.192114031720635 30.882687835261706 55-59 30.754695679942195 19.308171434654007 19.159212822439915 30.777920062963883 60-64 30.819465903702675 19.205597076308226 19.14798770397943 30.826949316009667 65-69 30.724374957663887 19.25985181553389 19.215789999967743 30.79998322683448 70-74 30.813788832297373 19.250433037975093 19.206242198058828 30.729535931668707 75-79 30.833400533515686 19.218434999145213 19.094636135204617 30.853528332134484 80-84 30.755921411268343 19.246626819646536 19.254045719778464 30.743406049306653 85-89 30.72572971334015 19.337266425606174 19.174631232279314 30.762372628774365 90-94 30.828110535160747 19.21146768423871 19.137794780319915 30.82262700028063 95-99 30.716568984481597 19.30952619033027 19.229014995855092 30.74488982933304 100-101 30.912137643176706 19.299623571458525 19.186243423790156 30.601995361574613 >>END_MODULE >>Per base GC content warn #Base %GC 1 57.885567725388356 2 54.43143731794413 3 57.209681946196355 4 60.04445562825029 5 60.76412410242514 6 62.635604401276126 7 61.99532909252784 8 60.89270679772001 9 62.121173016743555 10-14 61.32999316784331 15-19 61.52890831801634 20-24 61.50164989887716 25-29 61.500424167551024 30-34 61.68959984723399 35-39 61.55642575592385 40-44 61.54429244659199 45-49 61.77969737338679 50-54 61.576096948896684 55-59 61.53261574290608 60-64 61.64641521971234 65-69 61.524358184498375 70-74 61.543324763966076 75-79 61.686928865650174 80-84 61.499327460574996 85-89 61.488102342114516 90-94 61.65073753544138 95-99 61.46145881381464 100-101 61.51413300475133 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 19.0 1 11.5 2 3.5 3 2.5 4 2.0 5 2.5 6 5.0 7 5.5 8 3.5 9 3.5 10 5.0 11 8.0 12 6.5 13 5.0 14 14.5 15 17.5 16 20.0 17 31.0 18 37.5 19 51.5 20 72.0 21 83.5 22 105.5 23 144.5 24 177.0 25 218.0 26 282.5 27 358.0 28 424.0 29 495.5 30 607.0 31 719.0 32 815.5 33 949.0 34 1100.5 35 1210.5 36 1271.0 37 1344.0 38 1431.0 39 1535.5 40 1641.0 41 1713.5 42 1764.5 43 1861.5 44 2028.0 45 2141.0 46 2269.5 47 2449.0 48 2713.5 49 3084.0 50 3447.0 51 3937.5 52 4568.5 53 5217.0 54 5876.5 55 6582.5 56 7436.5 57 8260.5 58 9211.5 59 10170.5 60 11067.0 61 12077.5 62 13071.5 63 13875.0 64 14594.5 65 15205.0 66 15492.5 67 15437.0 68 15093.0 69 14367.0 70 13308.0 71 12133.5 72 10644.0 73 9052.0 74 7362.5 75 5674.0 76 4197.5 77 2916.0 78 1897.5 79 1160.5 80 660.5 81 340.5 82 181.0 83 102.0 84 47.5 85 22.0 86 12.5 87 10.5 88 9.5 89 8.5 90 9.0 91 7.0 92 5.5 93 3.5 94 2.5 95 2.0 96 1.5 97 1.0 98 0.5 99 1.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.017418287266264328 2 0.005806095755421441 3 0.01290243501204765 4 0.015160361139155988 5 0.005483534880120251 6 0.005806095755421441 7 0.004838413129517868 8 0.005806095755421441 9 0.015805482889758367 10-14 0.004644876604337154 15-19 0.00477390095445763 20-24 0.0 25-29 0.0 30-34 7.74146100722859E-4 35-39 3.2256087530119123E-4 40-44 0.0 45-49 0.0 50-54 0.0 55-59 0.0 60-64 0.0 65-69 0.0 70-74 0.0 75-79 0.0 80-84 0.0 85-89 0.0 90-94 0.0 95-99 0.0 100-101 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 310019.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.12092804781155625 #Duplication Level Relative count 1 100.0 2 0.05953661501823621 3 0.0 4 5.003076892288758E-4 5 5.003076892288758E-4 6 0.0 7 0.0 8 0.0 9 0.0 10++ 0.0010006153784577515 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position AAAAA 31025 3.82372 4.603358 2 TTTTT 30195 3.7729626 5.0917196 7 >>END_MODULE