##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002004_Nocton-Corn_CGTACG_L002_R2_004.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 61 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.63892275 34.0 31.0 34.0 31.0 34.0 2 32.83699625 34.0 31.0 34.0 31.0 34.0 3 32.8510335 34.0 33.0 34.0 31.0 34.0 4 36.21467225 37.0 37.0 37.0 35.0 37.0 5 36.21807 37.0 37.0 37.0 35.0 37.0 6 36.1875265 37.0 37.0 37.0 35.0 37.0 7 36.1761015 37.0 37.0 37.0 35.0 37.0 8 36.161815 37.0 37.0 37.0 35.0 37.0 9 37.93518975 39.0 39.0 39.0 37.0 39.0 10-14 38.2353842 39.4 39.2 39.4 37.0 39.4 15-19 39.41160004999999 41.0 40.0 41.0 37.0 41.0 20-24 39.227202899999995 41.0 39.6 41.0 36.2 41.0 25-29 38.8365522 40.6 38.6 41.0 35.0 41.0 30-34 38.16118795 40.0 37.4 41.0 34.2 41.0 35-39 37.1990913 39.0 35.2 41.0 33.0 41.0 40-44 36.196939300000004 37.0 35.0 40.0 32.2 41.0 45-49 35.28680105 35.0 35.0 39.0 31.2 41.0 50-54 34.052186600000006 34.8 33.8 36.2 29.8 39.8 55-59 34.23193155 35.0 35.0 35.2 31.0 39.2 60-64 33.836291 35.0 35.0 35.0 31.0 37.2 65-69 33.495885400000006 35.0 34.4 35.0 30.4 36.0 70-74 33.1982289 35.0 34.0 35.0 29.8 35.0 75-79 32.917745350000004 35.0 33.8 35.0 29.0 35.0 80-84 32.61199755 35.0 33.0 35.0 28.6 35.0 85-89 32.278282749999995 35.0 33.0 35.0 27.0 35.0 90-94 31.9175495 35.0 33.0 35.0 26.6 35.0 95-99 31.383862799999996 35.0 33.0 35.0 24.2 35.0 100-101 30.333034875 34.0 31.5 35.0 20.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 10365.0 3 1712.0 4 1926.0 5 2272.0 6 2612.0 7 3099.0 8 3759.0 9 3994.0 10 4323.0 11 4581.0 12 4578.0 13 4732.0 14 4625.0 15 4956.0 16 5278.0 17 5831.0 18 6546.0 19 7361.0 20 8409.0 21 10160.0 22 12046.0 23 14646.0 24 17806.0 25 21599.0 26 26048.0 27 31854.0 28 39228.0 29 48138.0 30 60754.0 31 77425.0 32 103064.0 33 148097.0 34 249520.0 35 634770.0 36 1403209.0 37 760042.0 38 208523.0 39 41804.0 40 308.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 30.630622958276575 22.965941260484456 19.00655706004852 27.396878721190443 2 30.772007740856548 23.511700159473662 22.07658741384792 23.639704685821865 3 29.36309497432446 21.735917135275564 20.987244474520867 27.9137434158791 4 31.227834404759104 20.46044353471865 19.380622606941877 28.931099453580366 5 30.76561196905735 19.79194807139232 19.38109195590795 30.061348003642372 6 30.230377752566657 18.98073353671492 18.298104021262862 32.49078468945556 7 32.10447758576237 18.889933168080535 19.10586593977485 29.899723306382242 8 29.670591537013973 19.285179124935166 19.759947278608998 31.284282059441864 9 30.397710975598454 18.228350825755733 19.555456911826116 31.8184812868197 10-14 30.59839486243806 19.21909479215414 19.383785020836044 30.79872532457176 15-19 30.68395430206244 19.10491018956843 19.28428376516213 30.926851743207003 20-24 30.669785704824342 19.124201948296275 19.298445603477788 30.9075667434016 25-29 30.73760043640258 19.222803035800524 19.24317683062625 30.79641969717064 30-34 30.79892950226802 19.094860352196015 19.136085719926147 30.970124425609814 35-39 30.736960759519583 19.146381301617016 19.20954380407132 30.907114134792085 40-44 30.824138065071327 19.175174068880754 19.154758204578567 30.845929661469352 45-49 30.865813058423853 19.063179121884723 19.097273282711793 30.97373453697963 50-54 30.757735867784703 19.145741826922645 19.186531043480514 30.909991261812138 55-59 30.809232611892917 19.199524190391095 19.164001596440112 30.827241601275873 60-64 30.843519520153162 19.11697741692819 19.08918702091505 30.9503160420036 65-69 30.749233772164956 19.168255922546916 19.20543106009492 30.877079245193208 70-74 30.800860000000004 19.239965 19.15147 30.807705000000002 75-79 30.83389257549769 19.136278397583673 19.124061748336025 30.90576727858261 80-84 30.736704779525333 19.195754796250387 19.210614289761224 30.856926134463063 85-89 30.809700037816473 19.231154053450382 19.171811742067355 30.787334166665794 90-94 30.88190720022144 19.12810292690717 19.10653265296469 30.883457219906692 95-99 30.76539158496587 19.19169283617641 19.18721199265762 30.8557035862001 100-101 30.93288002884665 19.289283679888214 19.117769145788106 30.660067145477033 >>END_MODULE >>Per base GC content warn #Base %GC 1 58.02750167946702 2 54.41171242667841 3 57.276838390203565 4 60.158933858339466 5 60.826959972699726 6 62.72116244202222 7 62.00420089214461 8 60.95487359645584 9 62.21619226241815 10-14 61.397120187009826 15-19 61.61080604526944 20-24 61.577352448225945 25-29 61.53402013357322 30-34 61.769053927877835 35-39 61.644074894311665 40-44 61.67006772654068 45-49 61.83954759540349 50-54 61.66772712959684 55-59 61.63647421316879 60-64 61.793835562156765 65-69 61.62631301735817 70-74 61.608565000000006 75-79 61.7396598540803 80-84 61.59363091398839 85-89 61.597034204482256 90-94 61.76536442012813 95-99 61.621095171165976 100-101 61.59294717432368 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 37.0 1 30.5 2 25.0 3 27.5 4 26.0 5 27.0 6 36.0 7 46.5 8 62.5 9 77.5 10 100.5 11 149.5 12 191.5 13 234.5 14 287.5 15 350.5 16 450.0 17 563.5 18 657.5 19 786.0 20 1011.0 21 1275.5 22 1537.5 23 1891.5 24 2370.0 25 2948.5 26 3688.5 27 4522.0 28 5457.0 29 6575.0 30 7827.5 31 9203.5 32 10649.5 33 12242.5 34 13625.5 35 14927.0 36 16416.5 37 17635.5 38 18838.0 39 20000.5 40 21190.0 41 22296.5 42 23153.0 43 24236.0 44 25515.5 45 27198.0 46 29364.5 47 32001.0 48 35500.5 49 39670.5 50 44760.5 51 51128.5 52 58303.0 53 66292.0 54 75200.0 55 84822.5 56 95287.0 57 106149.5 58 117779.5 59 129498.0 60 141113.5 61 153479.5 62 165749.5 63 177053.0 64 186978.0 65 194624.5 66 198988.5 67 199003.0 68 194915.0 69 187029.5 70 174209.0 71 157249.5 72 137698.0 73 116693.5 74 95112.0 75 74150.5 76 55315.5 77 39257.0 78 26004.0 79 16055.0 80 9360.0 81 5166.0 82 2739.0 83 1488.0 84 901.5 85 663.0 86 551.0 87 423.5 88 335.0 89 289.5 90 245.0 91 208.0 92 177.5 93 154.5 94 126.0 95 91.5 96 77.5 97 66.5 98 52.0 99 35.0 100 23.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.19155 2 0.14025 3 0.14327499999999999 4 0.14085 5 0.147525 6 0.22039999999999998 7 0.223575 8 0.23024999999999998 9 0.20202499999999998 10-14 0.154975 15-19 0.11628000000000001 20-24 0.082445 25-29 0.09225 30-34 0.13430499999999998 35-39 0.098955 40-44 0.053215 45-49 0.070865 50-54 0.05936999999999999 55-59 0.07768 60-64 0.001425 65-69 3.7E-4 70-74 0.0 75-79 0.0135 80-84 0.030239999999999996 85-89 0.003895 90-94 0.00127 95-99 0.018824999999999998 100-101 0.023049999999999998 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.4439384179013432 #Duplication Level Relative count 1 100.0 2 0.29493790253004554 3 0.006520735940290122 4 0.002507975361650047 5 0.001003190144660019 6 0.0015047852169900284 7 0.002006380289320038 8 5.015950723300095E-4 9 0.0015047852169900284 10++ 0.00852711622961016 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position AAAAA 381985 3.6942878 4.1392007 60-64 TTTTT 373675 3.6558115 4.117971 10-14 >>END_MODULE