##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002003_Wally_GTTTCG_L003_R2_005.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 64685 Filtered Sequences 0 Sequence length 101 %GC 60 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.0050243487671 33.0 31.0 34.0 30.0 34.0 2 32.202535363685556 34.0 31.0 34.0 30.0 34.0 3 32.21703640720414 34.0 31.0 34.0 30.0 34.0 4 35.73383319162093 37.0 35.0 37.0 33.0 37.0 5 35.717693437427535 37.0 35.0 37.0 33.0 37.0 6 35.67638556079462 37.0 35.0 37.0 33.0 37.0 7 35.655669784339494 37.0 35.0 37.0 33.0 37.0 8 35.61062070031692 37.0 35.0 37.0 33.0 37.0 9 37.348396073278195 39.0 37.0 39.0 34.0 39.0 10-14 37.50301615521373 39.2 37.2 39.4 34.0 39.4 15-19 38.55216819973718 40.0 38.0 41.0 34.0 41.0 20-24 38.22600912112545 40.0 38.0 41.0 33.4 41.0 25-29 37.71033160701863 40.0 37.6 41.0 32.0 41.0 30-34 37.071855917136894 39.4 36.0 41.0 31.2 41.0 35-39 36.17942954317075 38.2 35.0 40.2 30.4 41.0 40-44 35.37791760068022 36.6 34.8 40.0 29.6 41.0 45-49 34.50830331607018 35.0 34.0 38.8 28.0 41.0 50-54 33.21572853057123 34.8 32.6 36.2 26.0 39.6 55-59 33.26482492076988 35.0 33.0 35.2 26.6 39.2 60-64 32.941983458297905 35.0 33.0 35.0 26.6 37.4 65-69 32.67013372497488 35.0 33.0 35.0 26.6 36.0 70-74 32.298211331838914 35.0 33.0 35.0 26.0 35.0 75-79 31.966894952461935 35.0 33.0 35.0 25.2 35.0 80-84 31.562767256705577 35.0 32.8 35.0 24.0 35.0 85-89 31.201171832727834 35.0 32.0 35.0 24.0 35.0 90-94 30.76335471902296 34.8 31.6 35.0 21.6 35.0 95-99 30.04471824998068 34.0 31.0 35.0 14.4 35.0 100-101 28.413465254695833 33.0 29.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 170.0 3 45.0 4 44.0 5 63.0 6 61.0 7 113.0 8 107.0 9 154.0 10 125.0 11 136.0 12 122.0 13 111.0 14 122.0 15 128.0 16 145.0 17 160.0 18 158.0 19 182.0 20 216.0 21 300.0 22 338.0 23 372.0 24 475.0 25 586.0 26 698.0 27 788.0 28 1021.0 29 1237.0 30 1465.0 31 1811.0 32 2388.0 33 3236.0 34 5106.0 35 10960.0 36 18718.0 37 9599.0 38 2859.0 39 362.0 40 4.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 32.63441109616366 22.53869586058666 17.68335111564689 27.143541927602787 2 30.46281835191514 23.301736535279655 21.490977129691196 24.74446798311401 3 28.97235279564572 21.55801583374567 21.254948045522017 28.214683325086593 4 31.07943036506734 20.334606404527392 19.940315123776536 28.645648106628734 5 30.73390949428735 20.446498971877368 19.60390222785671 29.21568930597857 6 29.49988405348999 19.799026049315916 18.73850197109067 31.962587926103424 7 31.83779520252401 19.31517654154874 19.281151889141494 29.565876366785755 8 29.20785187247668 19.737961545005955 20.177270406979442 30.87691617553792 9 30.317939197029474 18.76846909569119 19.616306954436453 31.297284752842884 10-14 30.28550575835921 19.621407983770208 19.674909387795495 30.418176870075087 15-19 30.263699085542168 19.630382142558936 19.78810060582445 30.31781816607445 20-24 30.157512940550767 19.743848213678334 19.882375495513323 30.21626335025757 25-29 30.1671624437999 19.8306730406496 19.6012343922968 30.4009301232537 30-34 30.33306531420089 19.747340425531913 19.531172686788718 30.388421573478475 35-39 30.18849838279767 19.583299834878385 19.866232938979213 30.361968843344734 40-44 30.277685878864517 19.59106186016455 19.656301499893328 30.474950761077597 45-49 30.333649740432804 19.67237951537151 19.649190069970288 30.344780674225397 50-54 30.094001236858382 19.870129870129873 19.807050092764378 30.22881880024737 55-59 30.438896189224707 19.753575017391977 19.60021643348535 30.20731235989797 60-64 30.317384246734175 19.669165958104664 19.530339336785964 30.4831104583752 65-69 30.180103578882278 19.78604004019479 19.753575017391977 30.28028136353096 70-74 30.278735410064154 19.723892710829404 19.728221380536446 30.269150498569992 75-79 30.21442374584525 19.7603772126459 19.707196413387955 30.318002628120894 80-84 30.181031150962355 19.882198345829792 19.76006802195254 30.17670248125531 85-89 30.45250057973255 19.76408750096622 19.66947514879802 30.11393677050321 90-94 30.198036639097165 19.78263894256783 19.637628507381926 30.381695910953084 95-99 30.345211409136585 19.790059519208473 19.73656952925717 30.128159542397775 100-101 30.508618690577414 19.843858699853133 19.604235912499036 30.04328669707042 >>END_MODULE >>Per base GC content warn #Base %GC 1 59.77795302376645 2 55.207286335029146 3 57.187036120732316 4 59.72507847169607 5 59.949598800265925 6 61.46247197959342 7 61.40367156930976 8 60.0847680480146 9 61.61522394987236 10-14 60.703682628434294 15-19 60.58151725161661 20-24 60.373776290808344 25-29 60.5680925670536 30-34 60.72148688767937 35-39 60.5504672261424 40-44 60.75263663994212 45-49 60.6784304146582 50-54 60.32282003710575 55-59 60.64620854912267 60-64 60.80049470510937 65-69 60.460384942413235 70-74 60.54788590863415 75-79 60.53242637396614 80-84 60.357733632217666 85-89 60.56643735023576 90-94 60.579732550050245 95-99 60.473370951534356 100-101 60.55190538764783 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3.0 1 1.5 2 1.5 3 2.0 4 1.0 5 0.5 6 0.5 7 1.0 8 1.0 9 2.0 10 2.0 11 1.0 12 3.5 13 4.0 14 3.0 15 5.0 16 5.0 17 6.0 18 10.5 19 13.0 20 11.5 21 15.0 22 24.0 23 27.0 24 30.0 25 39.5 26 55.5 27 65.5 28 66.5 29 92.0 30 116.0 31 146.5 32 168.0 33 176.0 34 219.0 35 259.5 36 293.5 37 331.5 38 364.5 39 394.0 40 430.5 41 448.0 42 495.0 43 528.0 44 542.5 45 589.0 46 609.0 47 661.5 48 729.0 49 798.5 50 872.5 51 984.0 52 1135.5 53 1278.5 54 1391.5 55 1489.0 56 1642.5 57 1812.0 58 2039.5 59 2238.0 60 2337.5 61 2497.0 62 2709.5 63 2849.0 64 2921.0 65 3062.5 66 3153.5 67 3055.5 68 2922.0 69 2715.0 70 2464.5 71 2241.0 72 1922.5 73 1612.5 74 1287.5 75 983.5 76 765.0 77 544.5 78 361.5 79 233.0 80 159.5 81 97.0 82 43.0 83 20.0 84 15.5 85 12.0 86 5.5 87 6.5 88 5.0 89 0.5 90 0.5 91 0.5 92 0.5 93 1.0 94 0.5 95 1.0 96 2.0 97 1.5 98 0.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.021643348535209092 2 0.024735255468810387 3 0.020097395068408443 4 0.01855144160160779 5 0.006183813867202597 6 0.0 7 0.040194790136816885 8 0.05874623173842468 9 0.07729767334003246 10-14 0.021334157841848958 15-19 0.019788204375048312 20-24 0.007111385947282987 25-29 0.008348148720723507 30-34 0.020097395068408443 35-39 0.008348148720723507 40-44 6.183813867202598E-4 45-49 6.183813867202598E-4 50-54 0.007729767334003247 55-59 0.0 60-64 0.0 65-69 0.0 70-74 0.0 75-79 0.0 80-84 0.0 85-89 0.0 90-94 0.0 95-99 0.0 100-101 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 64685.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.04174074360361753 #Duplication Level Relative count 1 100.0 2 0.01855918834482972 3 0.00154659902873581 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10++ 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position TTTTT 6760 3.6393306 5.066779 30-34 AAAAA 6880 3.5536668 4.608861 45-49 AATTT 4395 2.327229 5.139969 8 >>END_MODULE