##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002003_Wally_GTTTCG_L003_R1_003.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 60 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.7561555 34.0 31.0 34.0 31.0 34.0 2 32.98521125 34.0 31.0 34.0 31.0 34.0 3 33.025221 34.0 31.0 34.0 31.0 34.0 4 36.4327755 37.0 37.0 37.0 35.0 37.0 5 36.369674 37.0 37.0 37.0 35.0 37.0 6 36.33556775 37.0 37.0 37.0 35.0 37.0 7 36.3312155 37.0 37.0 37.0 35.0 37.0 8 36.32127425 37.0 37.0 37.0 35.0 37.0 9 38.1117665 39.0 39.0 39.0 37.0 39.0 10-14 38.36131685 39.4 38.6 39.4 36.2 39.4 15-19 39.5395601 41.0 40.0 41.0 37.0 41.0 20-24 39.054645199999996 40.8 38.8 41.0 35.6 41.0 25-29 34.19191105 38.8 27.6 41.0 23.0 41.0 30-34 35.98629265 38.8 35.0 40.6 27.4 41.0 35-39 36.12093375 38.0 35.0 40.0 29.6 41.0 40-44 35.383567299999996 36.4 34.6 40.0 29.4 41.0 45-49 34.89988025 35.0 34.8 39.0 29.8 41.0 50-54 34.2050118 35.0 34.4 37.0 29.0 40.4 55-59 33.7701263 35.0 34.0 35.2 29.2 39.2 60-64 33.36074205 35.0 33.8 35.0 29.0 37.6 65-69 32.94082145 35.0 33.0 35.0 28.4 36.2 70-74 32.357507899999995 35.0 33.0 35.0 26.0 35.0 75-79 31.956935650000002 34.6 32.6 35.0 26.2 35.0 80-84 31.946919200000004 35.0 33.0 35.0 25.6 35.0 85-89 31.613347400000002 35.0 33.0 35.0 25.2 35.0 90-94 31.41470645 35.0 33.0 35.0 24.0 35.0 95-99 30.913324 35.0 32.6 35.0 22.4 35.0 100-101 29.584391 34.0 30.5 35.0 10.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 93.0 3 15.0 4 57.0 5 150.0 6 436.0 7 1521.0 8 4038.0 9 5600.0 10 5789.0 11 6226.0 12 5824.0 13 6196.0 14 6593.0 15 6938.0 16 7732.0 17 8548.0 18 9268.0 19 9975.0 20 10873.0 21 12280.0 22 14809.0 23 18078.0 24 22403.0 25 28635.0 26 35646.0 27 44720.0 28 56259.0 29 71695.0 30 93092.0 31 129018.0 32 191083.0 33 295648.0 34 464015.0 35 739318.0 36 1014439.0 37 517458.0 38 139255.0 39 16191.0 40 86.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 32.14979294730831 21.665106646386402 17.722505392570103 28.462595013735182 2 30.28767343493866 22.347097628067292 22.19169712301565 25.173531813978396 3 27.649225 21.547025 22.800349999999998 28.0034 4 30.132554720291566 20.52276875637667 20.91612534509953 28.428551178232237 5 30.7485 20.37865 19.755275 29.117575000000002 6 29.265524999999997 20.0758 19.13625 31.522425 7 31.609650000000002 19.385375 19.542625 29.462349999999997 8 29.194575 19.659850000000002 20.091775000000002 31.0538 9 29.7184 18.943550000000002 20.521325 30.816725 10-14 30.290634999999998 19.61434 19.777785 30.31724 15-19 30.195975000000004 19.627435 19.77747 30.399120000000003 20-24 30.378934354535776 19.65065860267541 19.805205990432555 30.16520105235626 25-29 33.33877410305479 18.929892122756986 18.813037609702064 28.91829616448616 30-34 31.19931344174352 19.626496817683197 19.468656866373117 29.70553287420017 35-39 30.537553355181036 19.727205773427443 19.737223389026877 29.99801748236465 40-44 30.59672708083055 19.671006031482754 19.569577958212133 30.162688929474562 45-49 30.5334 19.744435 19.636575 30.08559 50-54 30.45409545409545 19.83725983725984 19.704009704009703 30.004635004635006 55-59 30.410622164248867 19.697167878867152 19.657982863193148 30.234227093690833 60-64 30.327902755233378 19.635154576297126 19.69470096644101 30.34224170202848 65-69 30.283828969128656 19.800180276664612 19.775713943554287 30.140276810652438 70-74 30.501070000000002 19.75291 19.632060000000003 30.113960000000002 75-79 30.406585000000003 19.6816 19.675395 30.236420000000003 80-84 30.33622902718667 19.80130884735491 19.757892939962446 30.104569185495976 85-89 30.474995616792988 19.71831556430052 19.662286526816775 30.144402292089712 90-94 30.383657352324256 19.62396800680415 19.66497838364495 30.327396257226646 95-99 30.370301628584755 19.69187931656561 19.744470115945763 30.19334893890387 100-101 30.787175 19.60575 19.4559375 30.151137500000004 >>END_MODULE >>Per base GC content pass #Base %GC 1 60.61238796104349 2 55.461205248917054 3 55.652625 4 58.5611058985238 5 59.866074999999995 6 60.78795 7 61.072 8 60.248374999999996 9 60.535125 10-14 60.607875 15-19 60.595095 20-24 60.54413540689204 25-29 62.257070267540946 30-34 60.904846315943686 35-39 60.535570837545684 40-44 60.75941601030511 45-49 60.61899 50-54 60.45873045873046 55-59 60.644849257939704 60-64 60.67014445726186 65-69 60.4241057797811 70-74 60.615030000000004 75-79 60.643005 80-84 60.440798212682644 85-89 60.619397908882696 90-94 60.7110536095509 95-99 60.56365056748862 100-101 60.9383125 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 39.0 1 32.0 2 26.0 3 25.0 4 28.5 5 40.0 6 37.0 7 41.0 8 54.0 9 58.5 10 81.5 11 111.0 12 131.5 13 161.0 14 213.5 15 268.0 16 345.0 17 431.0 18 534.0 19 667.0 20 799.5 21 1002.5 22 1257.5 23 1578.5 24 1930.0 25 2416.0 26 3029.0 27 3655.5 28 4457.0 29 5453.0 30 6626.5 31 7965.0 32 9464.5 33 11279.5 34 13338.0 35 15432.0 36 17507.5 37 19687.0 38 21934.5 39 24011.0 40 26091.0 41 28150.5 42 30030.0 43 31805.0 44 33701.5 45 36101.5 46 38782.0 47 41621.5 48 45136.5 49 49776.5 50 55075.0 51 61194.0 52 68436.0 53 76537.5 54 85233.0 55 94557.5 56 104358.5 57 114557.5 58 125499.5 59 136868.5 60 148469.5 61 159312.5 62 169382.0 63 179060.0 64 186344.0 65 190031.5 66 190873.5 67 187462.0 68 179021.5 69 167267.0 70 152289.0 71 134543.5 72 115918.0 73 96942.0 74 78424.0 75 61205.5 76 46158.5 77 33732.0 78 23416.0 79 15480.5 80 9848.0 81 5987.0 82 3519.5 83 2052.0 84 1172.5 85 722.0 86 500.5 87 367.5 88 251.5 89 173.5 90 136.0 91 100.5 92 70.5 93 52.0 94 34.5 95 19.0 96 10.5 97 4.0 98 2.0 99 1.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0013 2 3.25E-4 3 0.0 4 0.001675 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-14 0.0 15-19 0.0 20-24 0.001545 25-29 1.668325 30-34 0.06966 35-39 0.02611 40-44 0.00303 45-49 0.0 50-54 9.999999999999999E-5 55-59 3.9999999999999996E-5 60-64 0.027525 65-69 0.025885 70-74 0.0 75-79 0.0 80-84 0.00209 85-89 0.01613 90-94 0.037495 95-99 0.00152 100-101 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.3729067733066622 #Duplication Level Relative count 1 100.0 2 0.33968209368602736 3 0.0050174607634568295 4 5.01746076345683E-4 5 0.001505238229037049 6 5.01746076345683E-4 7 5.01746076345683E-4 8 5.01746076345683E-4 9 0.0 10++ 0.001003492152691366 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position TTTTT 428930 3.745831 4.5124445 90-94 AAAAA 424685 3.6777997 4.1100373 70-74 >>END_MODULE