##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002003_Wally_GTTTCG_L002_R2_005.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 124585 Filtered Sequences 0 Sequence length 101 %GC 60 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.129662479431715 33.0 31.0 34.0 30.0 34.0 2 32.30404944415459 34.0 31.0 34.0 30.0 34.0 3 32.34842075691295 34.0 31.0 34.0 30.0 34.0 4 35.72995946542521 37.0 35.0 37.0 35.0 37.0 5 35.81070754906289 37.0 35.0 37.0 35.0 37.0 6 35.778103302965846 37.0 36.0 37.0 35.0 37.0 7 35.69724284624955 37.0 35.0 37.0 35.0 37.0 8 35.701697636152026 37.0 35.0 37.0 33.0 37.0 9 37.442637556688204 39.0 38.0 39.0 35.0 39.0 10-14 37.59953445438857 39.2 37.4 39.4 34.4 39.4 15-19 38.654712846650874 40.0 38.0 41.0 34.4 41.0 20-24 38.379230244411445 40.0 38.0 41.0 33.6 41.0 25-29 37.99181763454669 40.0 37.8 41.0 33.0 41.0 30-34 37.27741381386202 39.6 36.2 41.0 31.8 41.0 35-39 36.256833487177424 38.4 35.0 40.2 30.6 41.0 40-44 35.35657583176145 36.6 35.0 40.0 29.4 41.0 45-49 34.62038768712124 35.0 34.0 38.8 28.8 41.0 50-54 33.334277802303646 34.8 32.6 36.2 26.2 39.8 55-59 33.45653810651363 35.0 33.6 35.2 27.0 39.2 60-64 33.07174539471043 35.0 33.0 35.0 27.0 37.6 65-69 32.72036440984067 35.0 33.0 35.0 26.4 36.2 70-74 32.36377894610106 35.0 33.0 35.0 26.0 35.0 75-79 32.04377413011197 35.0 33.0 35.0 25.8 35.0 80-84 31.71459003892925 35.0 33.0 35.0 24.6 35.0 85-89 31.379594654252116 35.0 32.6 35.0 24.0 35.0 90-94 30.913084239675726 35.0 31.8 35.0 22.4 35.0 95-99 30.32009150379259 34.6 31.0 35.0 16.8 35.0 100-101 28.847959224625757 33.5 29.0 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 303.0 3 71.0 4 85.0 5 111.0 6 159.0 7 188.0 8 216.0 9 214.0 10 240.0 11 251.0 12 235.0 13 226.0 14 238.0 15 265.0 16 261.0 17 311.0 18 309.0 19 338.0 20 410.0 21 464.0 22 568.0 23 746.0 24 891.0 25 985.0 26 1232.0 27 1568.0 28 1844.0 29 2169.0 30 2714.0 31 3426.0 32 4403.0 33 5985.0 34 9087.0 35 20710.0 36 37500.0 37 19350.0 38 5738.0 39 765.0 40 9.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 32.7614582413436 22.437199444448904 17.767198400783553 27.034143913423947 2 30.46060975805545 23.207892497631928 21.253231011286463 25.078266733026155 3 28.920982282627023 21.55386257997704 21.23676415101913 28.28839098637681 4 31.028780154939188 20.438325372295587 19.92534018383976 28.607554288925463 5 30.925393741872302 20.25061409282836 19.760945301587814 29.063046863711527 6 29.825082481757686 19.586908880736594 18.569834554839332 32.01817408266639 7 31.82102778981843 19.331663696639858 19.22570598339996 29.62160253014176 8 29.294705070160227 19.68018495328003 19.88247760331375 31.142632373245995 9 30.217958495564563 18.695460201501223 19.965479869947416 31.12110143298679 10-14 30.345228386301315 19.604522132247645 19.63839638332167 30.41185309812937 15-19 30.24349364495554 19.622534279673328 19.760600169210985 30.373371906160145 20-24 30.285989485090504 19.627402977886582 19.691937231608943 30.394670305413975 25-29 30.21374964883413 19.784083156078182 19.701087610868083 30.301079584219607 30-34 30.366611496481898 19.620144448493466 19.687247660618283 30.325996394406353 35-39 30.165365542771738 19.806460830632357 19.778206937294016 30.24996668930189 40-44 30.36208211261388 19.706224665890755 19.596741180719988 30.334952040775377 45-49 30.210538989444956 19.699803347112415 19.66817835212907 30.42147931131356 50-54 30.226752819360275 19.696432154753783 19.63687442308464 30.4399406028013 55-59 30.29080547417426 19.819079343420153 19.558534333988842 30.331580848416746 60-64 30.304129710639323 19.71521451218044 19.55885539992776 30.421800377252477 65-69 30.17104787895814 19.793554601276238 19.733996869607097 30.301400650158527 70-74 30.336075771561582 19.831921980976844 19.63382429666493 30.198177950796644 75-79 30.372677288598144 19.74282618292732 19.575711361720913 30.308785166753623 80-84 30.206846731147408 19.89806156439379 19.769795721796363 30.125295982662436 85-89 30.295300397319096 19.839467030541396 19.719227836416906 30.1460047357226 90-94 30.246498374603686 19.698198017417827 19.691776698639483 30.363526909339004 95-99 30.174900670225146 19.752779227033752 19.768511458040695 30.303808644700403 100-101 30.456314965686076 19.817795079664485 19.76321387004856 29.962676084600876 >>END_MODULE >>Per base GC content pass #Base %GC 1 59.79560215476754 2 55.5388764910816 3 57.20937326900383 4 59.63633444386465 5 59.988440605583826 6 61.843256564424074 7 61.44263031996019 8 60.43733744340622 9 61.33905992855135 10-14 60.757081484430685 15-19 60.61686555111569 20-24 60.68065979050448 25-29 60.51482923305373 30-34 60.69260789088825 35-39 60.415332232073624 40-44 60.697034153389254 45-49 60.63201830075852 50-54 60.66669342216158 55-59 60.622386322591005 60-64 60.7259300878918 65-69 60.47244852911666 70-74 60.53425372235823 75-79 60.68146245535176 80-84 60.332142713809844 85-89 60.4413051330417 90-94 60.61002528394269 95-99 60.47870931492555 100-101 60.418991050286955 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 6.0 1 3.5 2 1.0 3 1.5 4 1.5 5 1.0 6 1.0 7 1.5 8 1.5 9 1.5 10 3.5 11 5.0 12 9.0 13 11.0 14 5.5 15 7.0 16 16.0 17 19.5 18 20.0 19 24.0 20 28.5 21 31.0 22 38.5 23 55.0 24 75.5 25 90.0 26 109.5 27 138.5 28 153.0 29 171.0 30 211.0 31 246.5 32 287.5 33 370.5 34 428.5 35 506.0 36 585.5 37 623.0 38 692.0 39 790.0 40 841.0 41 871.5 42 895.5 43 979.5 44 1053.0 45 1071.5 46 1152.0 47 1236.5 48 1342.0 49 1484.5 50 1665.0 51 1839.0 52 2088.5 53 2374.5 54 2610.5 55 2881.0 56 3207.5 57 3569.5 58 3900.0 59 4218.0 60 4582.0 61 4984.0 62 5345.0 63 5689.5 64 5843.5 65 5852.5 66 5878.0 67 5878.0 68 5760.5 69 5317.0 70 4762.5 71 4281.0 72 3657.0 73 3030.0 74 2458.0 75 1874.0 76 1424.5 77 1062.5 78 742.5 79 462.0 80 279.0 81 154.5 82 80.5 83 49.0 84 23.5 85 14.5 86 12.5 87 8.0 88 7.0 89 5.5 90 3.0 91 2.5 92 2.5 93 1.5 94 1.0 95 2.5 96 2.5 97 1.0 98 0.5 99 0.5 100 0.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.019263956335032306 2 0.008829313320223141 3 0.014447967251274231 4 0.016053296945860256 5 0.008829313320223141 6 0.009631978167516153 7 0.00561865393105109 8 0.010434643014809166 9 0.016053296945860256 10-14 0.005297587992133884 15-19 0.0054581209615924865 20-24 0.0 25-29 0.0 30-34 6.421318778344102E-4 35-39 3.210659389172051E-4 40-44 0.0 45-49 0.0 50-54 0.0 55-59 0.0 60-64 0.0 65-69 0.0 70-74 0.0 75-79 0.0 80-84 0.0 85-89 0.0 90-94 0.0 95-99 0.0 100-101 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 124585.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.08989846289681744 #Duplication Level Relative count 1 100.0 2 0.044989676476022915 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10++ 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position AAAAA 14050 3.790204 6.019276 9 TTTTT 13520 3.7796066 4.7461133 8 >>END_MODULE