##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002003_Wally_GTTTCG_L002_R2_003.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 60 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.464216 34.0 31.0 34.0 31.0 34.0 2 32.64421725 34.0 31.0 34.0 31.0 34.0 3 32.6778375 34.0 31.0 34.0 31.0 34.0 4 36.036727 37.0 37.0 37.0 35.0 37.0 5 36.03561275 37.0 37.0 37.0 35.0 37.0 6 36.03779475 37.0 37.0 37.0 35.0 37.0 7 36.0294035 37.0 37.0 37.0 35.0 37.0 8 36.0222235 37.0 37.0 37.0 35.0 37.0 9 37.7487875 39.0 38.0 39.0 35.0 39.0 10-14 37.99098725 39.4 38.4 39.4 35.2 39.4 15-19 39.008269150000004 41.0 39.0 41.0 35.8 41.0 20-24 38.62488385 40.6 38.6 41.0 34.6 41.0 25-29 38.483565600000006 40.0 38.0 41.0 34.8 41.0 30-34 37.856156150000004 40.0 37.2 41.0 33.4 41.0 35-39 36.84645715 38.8 35.2 40.8 32.0 41.0 40-44 35.971102849999994 37.0 35.0 40.0 31.0 41.0 45-49 35.101118150000005 35.2 35.0 39.2 30.6 41.0 50-54 33.84973715 34.8 33.4 36.8 28.6 39.8 55-59 34.010031 35.0 35.0 35.4 30.0 39.4 60-64 33.607466949999996 35.0 34.4 35.0 30.0 37.8 65-69 33.25275435 35.0 34.0 35.0 29.2 36.2 70-74 32.936882250000004 35.0 34.0 35.0 29.0 35.4 75-79 32.537502700000005 35.0 33.0 35.0 27.8 35.0 80-84 32.260154400000005 35.0 33.0 35.0 27.0 35.0 85-89 31.964919 35.0 33.0 35.0 26.6 35.0 90-94 31.408131100000002 35.0 33.0 35.0 23.4 35.0 95-99 30.9186597 35.0 32.4 35.0 22.2 35.0 100-101 29.567604875 34.0 30.5 35.0 7.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 14857.0 3 2815.0 4 3087.0 5 3320.0 6 3812.0 7 4355.0 8 4832.0 9 5462.0 10 5691.0 11 5609.0 12 5769.0 13 5510.0 14 5508.0 15 5652.0 16 5952.0 17 6651.0 18 7385.0 19 8588.0 20 9790.0 21 11683.0 22 14015.0 23 17107.0 24 20584.0 25 24871.0 26 30394.0 27 36474.0 28 44760.0 29 54707.0 30 68804.0 31 87799.0 32 116061.0 33 165488.0 34 276644.0 35 650228.0 36 1287331.0 37 731830.0 38 214705.0 39 31572.0 40 298.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 32.72723720702369 22.5628105588312 17.774553480300185 26.935398753844925 2 30.314560399663076 23.236125119060617 21.417590022845616 25.031724458430695 3 28.899153302680276 21.404014602925393 21.46682100001602 28.230011094378316 4 30.928019587324318 20.492311774926023 19.92757396568213 28.652094672067534 5 30.681466541554048 20.46102064258082 19.597483193416167 29.260029622448968 6 29.624241314697713 19.725517736754334 18.44261803077459 32.20762291777337 7 31.792166206995752 19.228453316822705 19.383077856370036 29.596302619811503 8 29.217740946747632 19.679930341312556 19.92248469335415 31.179844018585655 9 30.117206092634756 18.6996219755668 19.900161109579038 31.28301082221941 10-14 30.277976036457165 19.606285856941927 19.709526538932668 30.40621156766824 15-19 30.401061841726158 19.548797299676664 19.635683444312836 30.41445741428434 20-24 30.22595485143888 19.686076129659234 19.726604891977644 30.36136412692424 25-29 30.26648117701446 19.728807900586933 19.701602573783948 30.30310834861466 30-34 30.281890851439762 19.62430325842667 19.666209291674992 30.42759659845857 35-39 30.265333472962 19.710201504368847 19.722854101947128 30.301610920722023 40-44 30.32388803465645 19.698238327500064 19.656065966314422 30.321807671529065 45-49 30.33545025850889 19.609127655313475 19.623663858184266 30.431758227993367 50-54 30.221033429129392 19.697477241601707 19.71902235210192 30.362466977166985 55-59 30.302996963814266 19.716143913593555 19.68322810559923 30.29763101699295 60-64 30.324629097388726 19.627240888172267 19.65004589501377 30.398084119425235 65-69 30.206827655120744 19.723539792654847 19.738314803736102 30.331317748488313 70-74 30.324485000000003 19.728815 19.660574999999998 30.286125000000002 75-79 30.341384217373868 19.668446048043297 19.648720515453917 30.34144921912892 80-84 30.216126812157274 19.73672104713554 19.737671090267497 30.30948105043969 85-89 30.335895 19.761465 19.65662 30.24602 90-94 30.360833396916735 19.70409167450084 19.62035658239224 30.31471834619018 95-99 30.277186428596288 19.74135406828903 19.69908293542267 30.282376567692015 100-101 30.530779686383312 19.84603062511196 19.57340959921534 30.049780089289385 >>END_MODULE >>Per base GC content pass #Base %GC 1 59.66263596086861 2 55.34628485809377 3 57.12916439705859 4 59.58011425939185 5 59.94149616400301 6 61.83186423247108 7 61.388468826807255 8 60.397584965333294 9 61.40021691485417 10-14 60.684187604125405 15-19 60.8155192560105 20-24 60.58731897836312 25-29 60.56958952562912 30-34 60.70948744989833 35-39 60.56694439368402 40-44 60.645695706185506 45-49 60.767208486502255 50-54 60.58350040629637 55-59 60.60062798080721 60-64 60.722713216813965 65-69 60.53814540360906 70-74 60.61061 75-79 60.68283343650278 80-84 60.525607862596964 85-89 60.581914999999995 90-94 60.675551743106915 95-99 60.5595629962883 100-101 60.5805597756727 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 177.0 1 135.5 2 86.5 3 83.0 4 75.5 5 71.5 6 86.0 7 92.0 8 103.0 9 127.0 10 155.5 11 194.0 12 221.5 13 255.0 14 309.5 15 382.0 16 453.0 17 573.5 18 713.0 19 856.5 20 1022.5 21 1202.0 22 1495.0 23 1766.5 24 2119.0 25 2657.5 26 3265.0 27 3931.5 28 4794.5 29 5859.5 30 7051.0 31 8381.0 32 10036.5 33 11943.0 34 13845.5 35 15903.0 36 18091.5 37 20158.0 38 22175.5 39 24256.0 40 26157.0 41 27994.0 42 29954.0 43 31622.5 44 33523.5 45 35706.5 46 38035.0 47 40889.0 48 44291.0 49 48535.5 50 53669.0 51 59914.0 52 66919.0 53 74683.0 54 83377.0 55 92652.5 56 102561.5 57 113047.0 58 124327.5 59 135888.5 60 147070.0 61 158238.0 62 168736.5 63 178205.5 64 185731.5 65 190094.0 66 190645.0 67 187490.5 68 180390.5 69 168571.0 70 153543.0 71 136296.5 72 117327.5 73 98252.5 74 79745.0 75 62286.0 76 47048.5 77 34322.5 78 23919.5 79 15841.0 80 10059.5 81 6099.0 82 3490.5 83 2037.0 84 1311.5 85 874.5 86 642.0 87 527.0 88 424.5 89 343.5 90 293.5 91 267.5 92 230.5 93 199.5 94 159.0 95 125.0 96 111.5 97 97.5 98 77.5 99 57.5 100 40.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.184975 2 0.1559 3 0.1296 4 0.13949999999999999 5 0.1433 6 0.0409 7 0.064375 8 0.08425 9 0.09905 10-14 0.039405 15-19 0.0416 20-24 0.02162 25-29 0.01958 30-34 0.038259999999999995 35-39 0.02053 40-44 0.017455 45-49 0.008275000000000001 50-54 0.023719999999999998 55-59 0.017645 60-64 2.9999999999999997E-5 65-69 7.500000000000001E-5 70-74 0.0 75-79 0.0026999999999999997 80-84 0.00454 85-89 0.0 90-94 1.1E-4 95-99 0.00268 100-101 0.007712500000000001 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.5796753817861899 #Duplication Level Relative count 1 100.0 2 0.515199646145804 3 0.005026338011178575 4 0.0 5 0.0015079014033535726 6 0.001005267602235715 7 5.026338011178575E-4 8 0.001005267602235715 9 5.026338011178575E-4 10++ 0.00201053520447143 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position AAAAA 463345 3.9425542 4.3135056 60-64 TTTTT 452850 3.941258 4.281911 95-97 >>END_MODULE