##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002003_Wally_GTTTCG_L002_R2_001.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 60 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.5085895 34.0 31.0 34.0 31.0 34.0 2 32.6754465 34.0 31.0 34.0 31.0 34.0 3 32.7139245 34.0 31.0 34.0 31.0 34.0 4 36.08683575 37.0 37.0 37.0 35.0 37.0 5 36.08733725 37.0 37.0 37.0 35.0 37.0 6 36.076142 37.0 37.0 37.0 35.0 37.0 7 36.0651055 37.0 37.0 37.0 35.0 37.0 8 36.04607825 37.0 37.0 37.0 35.0 37.0 9 37.80500275 39.0 39.0 39.0 35.0 39.0 10-14 38.09300234999999 39.4 38.8 39.4 35.4 39.4 15-19 39.2271726 41.0 39.6 41.0 36.0 41.0 20-24 39.01949525 41.0 39.0 41.0 35.6 41.0 25-29 38.6526201 40.4 38.4 41.0 35.0 41.0 30-34 37.99824220000001 40.0 37.4 41.0 33.6 41.0 35-39 37.0676744 39.0 35.2 41.0 32.6 41.0 40-44 36.1151826 37.0 35.0 40.0 31.6 41.0 45-49 35.251733650000006 35.2 35.0 39.2 31.0 41.0 50-54 33.99303625 34.8 33.8 37.0 29.2 39.8 55-59 34.1626841 35.0 35.0 35.4 31.0 39.4 60-64 33.7552187 35.0 34.8 35.0 30.6 38.0 65-69 33.3895028 35.0 34.0 35.0 30.0 36.2 70-74 33.073334 35.0 34.0 35.0 29.0 35.4 75-79 32.76416245 35.0 33.4 35.0 29.0 35.0 80-84 32.4488229 35.0 33.0 35.0 27.4 35.0 85-89 32.135073999999996 35.0 33.0 35.0 27.0 35.0 90-94 31.772988500000004 35.0 33.0 35.0 25.8 35.0 95-99 31.221487200000002 35.0 33.0 35.0 23.8 35.0 100-101 30.14241675 34.0 31.5 35.0 18.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 12178.0 3 2572.0 4 2854.0 5 2890.0 6 3353.0 7 3828.0 8 4274.0 9 4669.0 10 4878.0 11 5058.0 12 5030.0 13 4900.0 14 5070.0 15 5039.0 16 5491.0 17 6043.0 18 6997.0 19 7773.0 20 9026.0 21 10830.0 22 13047.0 23 15719.0 24 19072.0 25 23200.0 26 28226.0 27 34260.0 28 42440.0 29 52623.0 30 65909.0 31 84964.0 32 111335.0 33 156393.0 34 254589.0 35 605366.0 36 1324621.0 37 787618.0 38 231547.0 39 35937.0 40 381.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 32.67898452801657 22.592382707494384 17.78616705773772 26.942465706751324 2 30.339585450244062 23.247823911755557 21.390492969561056 25.02209766843932 3 28.929626166001277 21.3802350343087 21.450091827881874 28.24004697180815 4 30.936267119189264 20.520644674455625 19.89851790169851 28.644570304656604 5 30.68301483743715 20.38709231598919 19.608616339257594 29.321276507316067 6 29.614316382093865 19.681146319623487 18.473507525625568 32.23102977265709 7 31.84617429444863 19.23016560172833 19.38302912066306 29.540630983159982 8 29.178879426356026 19.666559425554848 19.96021646847925 31.194344679609877 9 30.091022210741087 18.6799664276905 19.904159216652786 31.32485214491563 10-14 30.309548840274488 19.57641322306689 19.70162153875236 30.412416397906263 15-19 30.268826112169663 19.5375679804314 19.690997948130565 30.502607959268367 20-24 30.193707802275966 19.589516464683072 19.785456840953806 30.431318892087155 25-29 30.272870605896358 19.702188749736226 19.710506465886436 30.31443417848098 30-34 30.282609808271317 19.603709989484237 19.671005067067693 30.442675135176756 35-39 30.202947471945365 19.676165496674123 19.740478867788582 30.38040816359193 40-44 30.32336247605405 19.68649945984397 19.6480819184806 30.342056145621388 45-49 30.332467505192344 19.598238741046377 19.636302176271407 30.432991577489872 50-54 30.214098525719386 19.678538902847887 19.712165189282135 30.39519738215059 55-59 30.31304103514071 19.705740396752063 19.678104611200357 30.30311395690688 60-64 30.334598200758922 19.620851772511063 19.632506779504066 30.412043247225952 65-69 30.217125 19.71578 19.723975 30.343120000000003 70-74 30.31272 19.743305 19.64788 30.296095 75-79 30.331395633725773 19.648634026778456 19.62788367402246 30.39208666547331 80-84 30.21472503837742 19.742111147284437 19.729490762993734 30.313673051344413 85-89 30.354125354125355 19.741619741619743 19.664299664299666 30.23995523995524 90-94 30.355505 19.6719 19.60774 30.364855000000002 95-99 30.26124589611777 19.743826844583776 19.70934020819288 30.285587051105573 100-101 30.460572304609094 19.79430115494966 19.585004655200176 30.160121885241065 >>END_MODULE >>Per base GC content pass #Base %GC 1 59.62145023476789 2 55.36168311868338 3 57.169673137809426 4 59.580837423845864 5 60.00429134475321 6 61.84534615475095 7 61.386805277608616 8 60.3732241059659 9 61.41587435565672 10-14 60.72196523818075 15-19 60.77143407143804 20-24 60.625026694363115 25-29 60.58730478437734 30-34 60.72528494344807 35-39 60.583355635537295 40-44 60.665418621675435 45-49 60.76545908268221 50-54 60.60929590786998 55-59 60.61615499204759 60-64 60.74664144798487 65-69 60.560245 70-74 60.60881500000001 75-79 60.723482299199084 80-84 60.52839808972183 85-89 60.59408059408059 90-94 60.72035999999999 95-99 60.54683294722335 100-101 60.62069418985017 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 86.0 1 59.0 2 37.0 3 44.5 4 43.5 5 45.0 6 51.5 7 62.0 8 74.0 9 85.5 10 105.0 11 136.0 12 179.5 13 223.0 14 274.5 15 342.0 16 428.0 17 519.5 18 639.0 19 804.5 20 954.5 21 1170.5 22 1465.0 23 1793.0 24 2182.0 25 2685.5 26 3295.5 27 3928.0 28 4775.5 29 5866.5 30 7071.5 31 8429.0 32 9953.5 33 11795.5 34 13736.0 35 15673.0 36 17797.5 37 20011.5 38 22283.0 39 24322.0 40 26274.0 41 28283.5 42 30048.0 43 31780.5 44 33715.0 45 35674.0 46 38092.0 47 41001.5 48 44486.0 49 48769.5 50 53778.5 51 59908.0 52 66727.5 53 74507.5 54 83326.5 55 92659.5 56 102794.5 57 113225.5 58 124184.0 59 135733.0 60 146984.5 61 158444.0 62 169421.5 63 178471.5 64 185795.5 65 189973.0 66 190378.5 67 187021.0 68 179300.0 69 168482.5 70 154010.0 71 136301.0 72 117336.5 73 98374.5 74 79994.0 75 62691.0 76 47351.5 77 34281.5 78 23858.5 79 15859.0 80 9969.0 81 6064.5 82 3524.5 83 2032.5 84 1297.5 85 855.5 86 633.5 87 490.5 88 385.0 89 341.5 90 299.5 91 251.5 92 228.5 93 203.5 94 177.5 95 160.5 96 124.0 97 92.0 98 80.0 99 57.5 100 35.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.20994999999999997 2 0.15915 3 0.15287499999999998 4 0.14495 5 0.14785 6 0.10464999999999999 7 0.12332499999999999 8 0.14712499999999998 9 0.126025 10-14 0.070535 15-19 0.05212 20-24 0.02571 25-29 0.032654999999999997 30-34 0.059555000000000004 35-39 0.028564999999999997 40-44 0.01963 45-49 0.009025 50-54 0.018695 55-59 0.020935 60-64 5.9999999999999995E-5 65-69 0.0 70-74 0.0 75-79 0.0017 80-84 0.003045 85-89 9.999999999999999E-5 90-94 0.0 95-99 0.004745 100-101 0.0043 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.612592625903769 #Duplication Level Relative count 1 100.0 2 0.5329123660806306 3 0.007541212727556094 4 0.0025137375758520313 5 0.0015082425455112188 6 0.0010054950303408125 7 0.0 8 5.027475151704062E-4 9 0.0010054950303408125 10++ 0.0025137375758520313 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position TTTTT 439445 3.8301125 4.0780144 95-97 AAAAA 444040 3.8018138 4.0702744 85-89 >>END_MODULE