##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002003_Wally_GTTTCG_L002_R1_003.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 60 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.714975 34.0 31.0 34.0 31.0 34.0 2 32.96042 34.0 31.0 34.0 31.0 34.0 3 32.93980875 34.0 31.0 34.0 31.0 34.0 4 36.39229925 37.0 37.0 37.0 35.0 37.0 5 36.339397 37.0 37.0 37.0 35.0 37.0 6 36.3203615 37.0 37.0 37.0 35.0 37.0 7 36.32596775 37.0 37.0 37.0 35.0 37.0 8 36.2815855 37.0 37.0 37.0 35.0 37.0 9 38.09736275 39.0 39.0 39.0 37.0 39.0 10-14 38.1686189 39.4 38.4 39.4 36.0 39.4 15-19 39.3389132 41.0 39.0 41.0 36.4 41.0 20-24 39.18441505 40.8 39.0 41.0 35.8 41.0 25-29 37.664529200000004 40.0 37.2 41.0 31.2 41.0 30-34 35.0556907 38.6 33.8 40.2 23.0 41.0 35-39 36.098233199999996 38.0 35.0 40.0 29.4 41.0 40-44 31.9657064 35.8 25.4 39.6 18.0 41.0 45-49 33.63471475 35.0 32.2 38.4 25.6 41.0 50-54 33.8329585 35.0 33.8 37.0 27.6 40.4 55-59 32.55264345 35.0 33.0 35.0 23.2 39.0 60-64 33.128449 35.0 33.0 35.0 27.4 37.2 65-69 32.37121915 35.0 33.0 35.0 25.8 35.8 70-74 31.82325965 35.0 32.6 35.0 23.8 35.0 75-79 31.710977550000003 34.4 32.4 35.0 25.2 35.0 80-84 32.055303800000004 35.0 33.0 35.0 26.4 35.0 85-89 31.7086059 35.0 33.0 35.0 25.6 35.0 90-94 31.437360050000002 35.0 33.0 35.0 24.0 35.0 95-99 30.66904725 35.0 32.2 35.0 18.8 35.0 100-101 28.777226 33.5 29.0 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 76.0 3 15.0 4 54.0 5 144.0 6 420.0 7 1324.0 8 3504.0 9 5876.0 10 6861.0 11 7546.0 12 7680.0 13 7253.0 14 7201.0 15 7551.0 16 7965.0 17 8292.0 18 9082.0 19 9856.0 20 10679.0 21 12234.0 22 14537.0 23 18578.0 24 23902.0 25 30450.0 26 38904.0 27 50557.0 28 65375.0 29 84432.0 30 110552.0 31 151847.0 32 226291.0 33 352675.0 34 527389.0 35 722724.0 36 895425.0 37 441407.0 38 117926.0 39 13334.0 40 82.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 32.100915605095544 21.688183153026277 17.751301291489295 28.459599950388885 2 30.254625 22.356675 22.1944 25.1943 3 27.93555 21.482950000000002 22.709625 27.871875000000003 4 30.168 20.54745 20.827725 28.456825000000002 5 30.724325000000004 20.406525000000002 19.74525 29.123900000000003 6 29.2437 20.030075 19.176625 31.549599999999998 7 31.604 19.367124999999998 19.487975 29.540899999999997 8 29.225025 19.687675 20.0329 31.054399999999998 9 29.721874999999997 18.967325 20.463725 30.847075 10-14 30.395891519794578 19.6175459808773 19.7165059858253 30.270056513502823 15-19 30.24634 19.618305 19.722585000000002 30.412770000000002 20-24 30.288812025329243 19.704797863482824 19.812874744020544 30.19351536716739 25-29 30.811388371190553 19.61502377606671 19.61580380286063 29.957784049882115 30-34 31.295155057691414 19.586182998843217 19.34363133356008 29.77503060990529 35-39 30.730326256422693 19.734269786764507 19.65965596828533 29.875747988527472 40-44 33.66124751553904 19.092298439189193 18.679575883937304 28.566878161334465 45-49 30.526395 19.68743 19.709004999999998 30.07717 50-54 30.594422945817207 19.850754888066167 19.670484752863565 29.88433741325306 55-59 30.70363114072623 19.860258972051795 19.56125391225078 29.874855974971194 60-64 30.39899305348928 19.706457289535628 19.669181865961498 30.22536779101359 65-69 30.415723147533825 19.90507169078562 19.690373374548475 29.98883178713208 70-74 30.615773603539793 19.806040234966137 19.560608001532813 30.017578159961257 75-79 30.419439999999998 19.684965 19.668385 30.22721 80-84 30.292472795911447 19.744829996915474 19.746090006806554 30.216607200366525 85-89 30.46787362641127 19.724517429706097 19.64795004478182 30.159658899100815 90-94 30.37505670993558 19.62858392790417 19.68416366547419 30.31219569668606 95-99 30.334754874627297 19.72292544838251 19.738610536219003 30.20370914077119 100-101 30.935000000000002 19.774449999999998 19.351725000000002 29.938825 >>END_MODULE >>Per base GC content pass #Base %GC 1 60.56051555548443 2 55.448925 3 55.807425 4 58.624825 5 59.848225 6 60.793299999999995 7 61.1449 8 60.279424999999996 9 60.56895 10-14 60.665948033297404 15-19 60.659110000000005 20-24 60.48232739249663 25-29 60.76917242107266 30-34 61.07018566759671 35-39 60.60607424495017 40-44 62.2281256768735 45-49 60.603565 50-54 60.47876035907027 55-59 60.57848711569742 60-64 60.62436084450288 65-69 60.404554934665896 70-74 60.633351763501054 75-79 60.64665 80-84 60.50907999627797 85-89 60.62753252551209 90-94 60.68725240662164 95-99 60.53846401539849 100-101 60.873825000000004 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 36.0 1 31.0 2 29.0 3 26.0 4 26.0 5 32.0 6 32.5 7 36.0 8 44.0 9 61.0 10 76.0 11 100.0 12 140.0 13 169.5 14 213.5 15 268.5 16 333.0 17 443.0 18 531.5 19 648.5 20 829.0 21 1011.5 22 1231.5 23 1506.5 24 1899.0 25 2422.5 26 2903.5 27 3514.5 28 4394.0 29 5382.0 30 6436.0 31 7717.0 32 9379.0 33 11141.5 34 13043.5 35 15022.0 36 17023.0 37 19382.0 38 21798.0 39 24061.5 40 26074.5 41 28008.0 42 29718.5 43 31451.0 44 33703.0 45 36143.0 46 38474.0 47 41174.0 48 44971.5 49 49465.0 50 54883.0 51 61212.5 52 68072.5 53 76074.5 54 84797.5 55 94127.0 56 104178.0 57 114759.0 58 126015.0 59 137867.0 60 149245.0 61 160500.5 62 170679.5 63 179583.0 64 187291.0 65 191058.5 66 191260.5 67 188356.0 68 180057.5 69 167384.5 70 152348.0 71 134910.5 72 116091.5 73 96538.5 74 77847.0 75 60814.0 76 45794.5 77 33260.0 78 23116.5 79 15203.0 80 9533.0 81 5826.5 82 3394.5 83 1916.0 84 1112.0 85 720.5 86 496.5 87 340.0 88 244.5 89 185.0 90 125.0 91 83.0 92 52.5 93 38.5 94 33.0 95 21.0 96 9.5 97 3.0 98 0.5 99 0.5 100 0.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0224 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-14 4.9999999999999996E-6 15-19 0.0 20-24 0.00174 25-29 0.003435 30-34 0.755165 35-39 0.018520000000000002 40-44 0.7153849999999999 45-49 0.0 50-54 7.500000000000001E-5 55-59 1.9999999999999998E-5 60-64 0.01455 65-69 0.01086 70-74 9.099999999999999E-4 75-79 0.0 80-84 7.849999999999999E-4 85-89 0.009645 90-94 0.01752 95-99 5.6E-4 100-101 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.30293184033592696 #Duplication Level Relative count 1 100.0 2 0.27326651256775253 3 0.002507032225392225 4 0.002507032225392225 5 0.0015042193352353352 6 5.01406445078445E-4 7 0.0 8 0.0 9 0.0 10++ 0.00100281289015689 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position TTTTT 418745 3.6756177 4.3667874 95-97 AAAAA 417105 3.5730066 4.001713 85-89 >>END_MODULE