##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002003_Wally_GTTTCG_L002_R1_001.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 60 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.76561825 34.0 31.0 34.0 31.0 34.0 2 33.0107635 34.0 31.0 34.0 31.0 34.0 3 33.03917175 34.0 31.0 34.0 31.0 34.0 4 36.42251 37.0 37.0 37.0 35.0 37.0 5 36.3584635 37.0 37.0 37.0 35.0 37.0 6 36.32184525 37.0 37.0 37.0 35.0 37.0 7 36.3150695 37.0 37.0 37.0 35.0 37.0 8 36.304396 37.0 37.0 37.0 35.0 37.0 9 38.08966875 39.0 39.0 39.0 37.0 39.0 10-14 38.3585425 39.4 38.6 39.4 35.8 39.4 15-19 39.50125575 41.0 39.8 41.0 37.0 41.0 20-24 39.2861037 40.8 39.0 41.0 36.0 41.0 25-29 38.84863094999999 40.0 38.4 41.0 35.0 41.0 30-34 38.1260254 40.0 37.2 41.0 33.6 41.0 35-39 37.1689502 38.8 35.2 40.6 32.6 41.0 40-44 36.36846985 37.2 35.0 40.0 32.0 41.0 45-49 35.7072206 35.2 35.0 39.4 32.0 41.0 50-54 34.8493395 35.0 35.0 37.6 31.0 40.6 55-59 34.1838868 35.0 34.2 35.4 30.8 39.4 60-64 33.6484684 35.0 34.0 35.0 30.0 37.6 65-69 33.19848315 35.0 33.0 35.0 29.0 36.2 70-74 32.870846549999996 35.0 33.0 35.0 29.0 35.2 75-79 32.11211085 34.4 32.4 35.0 26.8 35.0 80-84 32.399388699999996 35.0 33.0 35.0 27.2 35.0 85-89 32.04734575 35.0 33.0 35.0 27.0 35.0 90-94 31.629726299999998 35.0 33.0 35.0 25.0 35.0 95-99 31.07813245 35.0 32.8 35.0 23.8 35.0 100-101 29.878754 34.0 30.5 35.0 17.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 61.0 3 17.0 4 42.0 5 146.0 6 334.0 7 923.0 8 2254.0 9 3415.0 10 4335.0 11 4803.0 12 5190.0 13 5471.0 14 5805.0 15 6271.0 16 6893.0 17 7683.0 18 8533.0 19 8868.0 20 9852.0 21 10892.0 22 12577.0 23 15433.0 24 19172.0 25 23738.0 26 30172.0 27 37433.0 28 46582.0 29 57943.0 30 73146.0 31 92626.0 32 121683.0 33 168940.0 34 271925.0 35 640199.0 36 1315234.0 37 741186.0 38 214223.0 39 25814.0 40 186.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 32.10719320591507 21.680054479926035 17.767498462562685 28.44525385159622 2 30.28035 22.354325 22.178875 25.18645 3 27.674425000000003 21.5477 22.773075000000002 28.004800000000003 4 30.16355 20.484175 20.8616 28.490675 5 30.78575 20.368075 19.722224999999998 29.123949999999997 6 29.253425 20.0169 19.203924999999998 31.525750000000002 7 31.627475 19.3854 19.524475 29.46265 8 29.177500000000002 19.6774 20.079150000000002 31.065949999999997 9 29.717325 18.94765 20.490924999999997 30.8441 10-14 30.271047191170336 19.634580068179176 19.766905405608785 30.327467335041703 15-19 30.19337 19.643115 19.77396 30.389555 20-24 30.14336081175143 19.725670489884983 19.86218173896291 30.26878695940068 25-29 30.30241742338439 19.713527598938636 19.73436262810768 30.24969234956929 30-34 30.237052154655547 19.6452289049985 19.778257685647382 30.339461254698563 35-39 30.192694826284526 19.748764454287183 19.82835223001287 30.230188489415415 40-44 30.358037950053696 19.663164635816774 19.692499754624006 30.28629765950552 45-49 30.24769 19.635675 19.76749 30.349145 50-54 30.23829078882354 19.724373617540518 19.78500958165235 30.252326011983588 55-59 30.371575 19.66366 19.687569999999997 30.277195000000003 60-64 30.284038441208573 19.647776610607487 19.708000397257962 30.36018455092598 65-69 30.233726732784177 19.743326424525844 19.783899102905224 30.239047739784752 70-74 30.401280000000003 19.67914 19.65754 30.262040000000002 75-79 30.295075 19.65934 19.702865 30.34272 80-84 30.262338449516374 19.73839408385052 19.766255352931324 30.23301211370178 85-89 30.424153382208107 19.678482640087832 19.639432495231247 30.257931482472816 90-94 30.36968718053793 19.632260755117883 19.671704576728587 30.326347487615607 95-99 30.362551632400407 19.71805906677602 19.710583538256156 30.208805762567415 100-101 30.735175697611655 19.61517701762189 19.439225653998818 30.210421630767637 >>END_MODULE >>Per base GC content pass #Base %GC 1 60.55244705751128 2 55.466800000000006 3 55.679225 4 58.654225000000004 5 59.9097 6 60.779174999999995 7 61.09012499999999 8 60.243449999999996 9 60.561425 10-14 60.59851452621204 15-19 60.582924999999996 20-24 60.4121477711521 25-29 60.55210977295368 30-34 60.57651340935411 35-39 60.42288331569995 40-44 60.64433560955922 45-49 60.596835000000006 50-54 60.49061680080713 55-59 60.64877 60-64 60.64422299213456 65-69 60.472774472568936 70-74 60.66332 75-79 60.637795000000004 80-84 60.49535056321815 85-89 60.68208486468092 90-94 60.69603466815353 95-99 60.571357394967826 100-101 60.9455973283793 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 69.0 1 49.0 2 29.5 3 23.0 4 18.0 5 30.5 6 43.5 7 49.0 8 59.0 9 72.5 10 90.5 11 117.5 12 144.0 13 179.0 14 220.5 15 287.0 16 380.5 17 475.0 18 599.0 19 729.5 20 894.5 21 1125.0 22 1379.5 23 1679.5 24 2075.5 25 2595.5 26 3121.5 27 3834.0 28 4706.5 29 5754.0 30 6999.5 31 8315.0 32 9947.0 33 11918.5 34 13871.5 35 15849.0 36 18066.5 37 20236.0 38 22304.0 39 24538.0 40 26625.5 41 28201.0 42 30032.0 43 31937.0 44 33888.0 45 36160.0 46 38645.0 47 41729.0 48 45453.0 49 49617.5 50 54910.5 51 61274.0 52 68351.0 53 76260.5 54 84801.5 55 94045.0 56 103979.5 57 114616.5 58 125097.5 59 136167.5 60 147890.0 61 159175.5 62 169502.5 63 178235.5 64 185348.0 65 189213.5 66 189670.5 67 186659.5 68 178781.5 69 166873.5 70 152215.5 71 134957.0 72 116143.5 73 97155.0 74 78642.0 75 61446.5 76 46362.5 77 33710.0 78 23337.0 79 15490.5 80 9883.5 81 5954.5 82 3439.5 83 1960.5 84 1139.0 85 691.5 86 454.5 87 326.0 88 226.0 89 160.5 90 111.5 91 73.5 92 54.0 93 32.5 94 19.5 95 14.0 96 9.5 97 5.5 98 1.0 99 0.5 100 0.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.036575 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-14 2.55E-4 15-19 0.0 20-24 9.15E-4 25-29 1.4E-4 30-34 0.047945 35-39 0.009770000000000001 40-44 4.0500000000000003E-4 45-49 0.0 50-54 0.00159 55-59 0.0 60-64 0.014589999999999999 65-69 0.018925 70-74 0.0 75-79 0.0 80-84 0.004555 85-89 0.013175000000000001 90-94 0.022365 95-99 0.00707 100-101 7.750000000000001E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.5593294045316172 #Duplication Level Relative count 1 100.0 2 0.5142202249901981 3 0.0070372269304621446 4 0.0040212725316926545 5 0.0020106362658463273 6 0.0 7 0.0025132953323079086 8 0.0 9 5.026590664615818E-4 10++ 0.0015079771993847452 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position TTTTT 420730 3.5764482 3.8251214 85-89 AAAAA 411415 3.5280893 3.8581088 95-97 >>END_MODULE