##FastQC 0.10.1 >>Basic Statistics pass #Measure Value Filename 002002_Airport_GTGGCC_R2_filtered.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 105921087 Filtered Sequences 0 Sequence length 30-101 %GC 62 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.747549503528035 34.0 31.0 34.0 31.0 34.0 2 32.85277525522373 34.0 31.0 34.0 31.0 34.0 3 32.88842116017937 34.0 31.0 34.0 31.0 34.0 4 36.2669685593389 37.0 37.0 37.0 35.0 37.0 5 36.26195574258033 37.0 37.0 37.0 35.0 37.0 6 36.2527468869348 37.0 37.0 37.0 35.0 37.0 7 36.25496393366885 37.0 37.0 37.0 35.0 37.0 8 36.239189973569665 37.0 37.0 37.0 35.0 37.0 9 38.0069734650665 39.0 39.0 39.0 37.0 39.0 10-14 38.28336918407946 39.4 39.0 39.4 35.4 39.4 15-19 39.43693075015365 41.0 39.8 41.0 36.8 41.0 20-24 39.187311340564314 41.0 39.0 41.0 35.6 41.0 25-29 38.8567132246292 40.2 38.4 41.0 35.0 41.0 30-34 38.21302344449403 40.0 37.0 41.0 33.8 41.0 35-39 37.217852090549265 38.6 35.0 40.8 32.8 41.0 40-44 36.286302073470544 36.4 35.0 39.8 32.0 41.0 45-49 35.37691748208446 35.0 35.0 38.4 31.0 40.8 50-54 34.145296423656106 34.8 33.4 35.6 29.6 39.2 55-59 34.38241747141964 35.0 35.0 35.0 31.0 38.0 60-64 34.101173650397534 35.0 34.8 35.0 31.0 36.2 65-69 33.874869207697614 35.0 34.0 35.0 31.0 35.0 70-74 33.70244123876132 35.0 34.0 35.0 30.8 35.0 75-79 33.537647433529344 35.0 33.8 35.0 30.0 35.0 80-84 33.40440834324972 35.0 33.0 35.0 29.6 35.0 85-89 33.29525649195761 35.0 33.0 35.0 29.0 35.0 90-94 33.19435570525596 35.0 33.0 35.0 29.0 35.0 95-99 33.22869423061262 35.0 33.0 35.0 29.0 35.0 100-101 32.93867270387243 34.5 32.0 35.0 28.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 2.0 13 3.0 14 6.0 15 23.0 16 69.0 17 197.0 18 1332.0 19 6423.0 20 21531.0 21 54343.0 22 114312.0 23 211005.0 24 346796.0 25 520225.0 26 730917.0 27 978690.0 28 1266082.0 29 1602622.0 30 2018193.0 31 2572959.0 32 3391938.0 33 4784669.0 34 7834614.0 35 1.8648101E7 36 3.7856644E7 37 1.885698E7 38 3546746.0 39 552632.0 40 3033.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 34.41736582631559 19.02295810087372 17.570251143665093 28.989424929145603 2 32.0800996601293 22.694594953972793 19.518828615239144 25.70647677065876 3 29.780946137527547 20.383876663090177 20.16052957825124 29.67464762113104 4 31.71144168935851 18.959171826468246 18.7982355366267 30.531150947546543 5 31.646355098015167 19.145579686611313 19.153498821983757 30.054566393389763 6 30.957896306127513 18.442186539934465 17.82275630710553 32.777160846832494 7 32.81256777841919 18.266509752154334 18.30103569225898 30.619886777167494 8 30.354143517139338 18.973146693124455 19.104266636008635 31.56844315372757 9 31.00594786448263 17.988260486086464 18.84833579307501 32.157455856355895 10-14 31.162644683108542 18.851086353717168 18.820810446265448 31.16545851690884 15-19 31.249203890212378 18.625047585309886 18.72853298266233 31.397215541815406 20-24 31.178438041369738 18.697347704001572 18.776299653597007 31.34791460103168 25-29 31.277582268174637 18.791248553271757 18.714254998868125 31.216914179685485 30-34 31.349101988832935 18.634259002481517 18.61753098684426 31.399108021841286 35-39 31.249235790512074 18.72768070035533 18.71618580077095 31.306897708361642 40-44 31.34641682691409 18.747468657475178 18.651786549062617 31.25432796654811 45-49 31.39193390651457 18.612885515303752 18.583522509324762 31.41165806885692 50-54 31.25203823526894 18.708109913396882 18.70362862124915 31.336223230085025 55-59 31.33243528857761 18.752805285135498 18.668307564249744 31.24645186203715 60-64 31.37103454511106 18.62950251891823 18.596453439426575 31.403009496544136 65-69 31.221217666683238 18.73471871680692 18.729450000295262 31.314613616214583 70-74 31.303788862602943 18.7863892978375 18.68856448473159 31.22125735482797 75-79 31.33625531358507 18.674236800184488 18.631402401080326 31.358105485150112 80-84 31.1809953220257 18.779811044859905 18.76238522610416 31.276808407010236 85-89 31.24212284163757 18.835292575440608 18.74010345836879 31.18248112455303 90-94 31.251296660661293 18.734881184180434 18.69304461825514 31.320777536903133 95-99 31.03825045387486 18.854813145253367 18.860784399725134 31.246152001146644 100-101 31.43587050390726 18.7947187674327 18.614853293530466 31.154557435129576 >>END_MODULE >>Per base GC content pass #Base %GC 1 63.40679075546119 2 57.78657643078806 3 59.45559375865859 4 62.24259263690506 5 61.70092149140493 6 63.73505715296 7 63.43245455558668 8 61.922586670866906 9 63.16340372083853 10-14 62.32810320001738 15-19 62.64641943202779 20-24 62.52635264240142 25-29 62.494496447860115 30-34 62.74821001067422 35-39 62.55613349887372 40-44 62.600744793462205 45-49 62.80359197537149 50-54 62.588261465353966 55-59 62.57888715061476 60-64 62.774044041655195 65-69 62.53583128289782 70-74 62.52504621743091 75-79 62.69436079873518 80-84 62.45780372903593 85-89 62.4246039661906 90-94 62.57207419756443 95-99 62.28440245502151 100-101 62.59042793903683 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 659.0 1 493.0 2 301.5 3 296.5 4 317.5 5 361.5 6 422.5 7 497.5 8 608.0 9 787.0 10 1049.0 11 1351.0 12 1747.0 13 2252.0 14 2796.5 15 3530.0 16 4515.0 17 5648.0 18 7054.5 19 8801.0 20 10984.5 21 13729.5 22 17482.5 23 22172.5 24 27865.0 25 35149.0 26 44068.0 27 54376.5 28 66826.5 29 81592.0 30 98409.0 31 117582.5 32 138185.0 33 160289.0 34 183097.5 35 206037.0 36 228630.0 37 250563.0 38 273178.5 39 295751.5 40 319342.5 41 345291.5 42 375608.5 43 413192.5 44 460993.5 45 524254.5 46 605220.0 47 706803.5 48 833588.0 49 989379.5 50 1170719.5 51 1376086.5 52 1607762.0 53 1860895.5 54 2130537.0 55 2414652.5 56 2711622.0 57 3017650.0 58 3337152.5 59 3666323.5 60 4001528.0 61 4343080.0 62 4675385.5 63 4989002.0 64 5265164.5 65 5482594.0 66 5621317.0 67 5647842.5 68 5555278.0 69 5341952.5 70 5005463.0 71 4556615.0 72 4014237.5 73 3413166.0 74 2788508.0 75 2178336.5 76 1615793.0 77 1125994.5 78 733911.5 79 447517.5 80 256307.0 81 140678.0 82 75673.5 83 41410.0 84 24492.0 85 15373.0 86 9663.5 87 6496.0 88 4468.0 89 2858.0 90 1894.5 91 1398.5 92 916.5 93 512.0 94 377.5 95 284.5 96 170.5 97 113.0 98 91.0 99 81.0 100 81.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.009371127394113696 3 0.013805560737872714 4 0.02197957050799526 5 0.024252016975618837 6 0.031280834570740386 7 0.03623452240440093 8 0.045123215172442485 9 0.03909042209885931 10-14 0.014875224987069856 15-19 0.0057089670916991245 20-24 0.00234759675379842 25-29 0.0029548412772614392 30-34 0.011013349957824421 35-39 9.984271005873504E-4 40-44 3.146903737512127E-4 45-49 2.8700602843618096E-5 50-54 3.2048572275332737E-4 55-59 6.244922245424929E-4 60-64 0.0 65-69 1.1059136618992472E-4 70-74 0.0 75-79 5.4061162575106785E-6 80-84 1.1644901356215286E-6 85-89 0.0 90-94 0.0 95-99 0.0 100-101 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 30-31 73890.0 32-33 78273.0 34-35 80976.0 36-37 83412.0 38-39 82974.0 40-41 84660.0 42-43 84360.0 44-45 85014.0 46-47 86194.0 48-49 86878.0 50-51 67363.0 52-53 60042.0 54-55 72286.0 56-57 81043.0 58-59 90355.0 60-61 97016.0 62-63 104552.0 64-65 111915.0 66-67 120996.0 68-69 131192.0 70-71 143811.0 72-73 158408.0 74-75 172068.0 76-77 189408.0 78-79 206856.0 80-81 230894.0 82-83 258072.0 84-85 292311.0 86-87 343446.0 88-89 406538.0 90-91 506098.0 92-93 643777.0 94-95 854364.0 96-97 1159581.0 98-99 1721979.0 100-101 9.6870085E7 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 3.067696229102639 #Duplication Level Relative count 1 100.0 2 3.0157723501781413 3 0.038154753618256536 4 0.008249676458001412 5 0.005671652564875972 6 0.010827700351126854 7 0.008765281236626501 8 0.005671652564875972 9 0.006702862122126148 10++ 0.02113979592362862 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position GATCG 33511340 3.0848622 4.2110744 1 CGATC 33269185 3.0723803 3.5277717 1 TTTTT 7074750 3.0503764 3.3348064 10-14 AAAAA 7186480 3.0381188 3.5762198 1 >>END_MODULE