##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002002_Airport_GTGGCC_L003_R2_013.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 62 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.53404525 34.0 31.0 34.0 31.0 34.0 2 32.67279825 34.0 31.0 34.0 31.0 34.0 3 32.7236675 34.0 31.0 34.0 31.0 34.0 4 36.125551 37.0 37.0 37.0 35.0 37.0 5 36.12447475 37.0 37.0 37.0 35.0 37.0 6 36.12986525 37.0 37.0 37.0 35.0 37.0 7 36.11306025 37.0 37.0 37.0 35.0 37.0 8 36.07534625 37.0 37.0 37.0 35.0 37.0 9 37.8340905 39.0 38.0 39.0 35.0 39.0 10-14 38.09687725 39.4 38.2 39.4 35.2 39.4 15-19 39.210036650000006 41.0 39.0 41.0 36.0 41.0 20-24 38.931726600000005 41.0 39.0 41.0 35.2 41.0 25-29 38.515970749999994 40.0 38.0 41.0 34.4 41.0 30-34 37.85179205000001 39.8 36.8 41.0 33.2 41.0 35-39 36.8484154 38.6 35.0 40.6 32.4 41.0 40-44 35.8819038 36.4 35.0 39.8 31.0 41.0 45-49 34.90944195 35.0 34.8 38.4 30.6 40.8 50-54 33.6209405 34.8 33.2 35.4 28.4 39.2 55-59 33.7530011 35.0 34.0 35.0 30.0 38.0 60-64 33.487570999999996 35.0 34.0 35.0 30.0 36.2 65-69 33.206542 35.0 34.0 35.0 29.4 35.0 70-74 32.94486855 35.0 33.8 35.0 29.0 35.0 75-79 32.685176350000006 35.0 33.0 35.0 29.0 35.0 80-84 32.40528775 35.0 33.0 35.0 27.0 35.0 85-89 32.13844580000001 35.0 33.0 35.0 27.0 35.0 90-94 31.7729505 35.0 33.0 35.0 25.8 35.0 95-99 31.234514 35.0 33.0 35.0 23.8 35.0 100-101 30.17943 34.0 31.5 35.0 20.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 5603.0 3 1090.0 4 1499.0 5 1932.0 6 2682.0 7 3184.0 8 4042.0 9 4568.0 10 4871.0 11 5117.0 12 5111.0 13 5176.0 14 5225.0 15 5177.0 16 5643.0 17 6196.0 18 7125.0 19 8074.0 20 9596.0 21 11594.0 22 13846.0 23 17300.0 24 21045.0 25 25946.0 26 31204.0 27 38432.0 28 47159.0 29 58322.0 30 72673.0 31 92603.0 32 121727.0 33 171191.0 34 276433.0 35 667133.0 36 1401055.0 37 694925.0 38 126932.0 39 18473.0 40 96.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 34.47775847556728 19.032146309921792 17.549886625569215 28.940208588941708 2 32.089617389559834 22.711905617771787 19.523781292705127 25.67469569996325 3 29.779893367285045 20.33878336649712 20.171817996490603 29.709505269727238 4 31.748299534119624 18.93066121196932 18.75867616536377 30.562363088547283 5 31.66541205775036 19.178310354399926 19.121565351786504 30.03471223606321 6 30.96709115496023 18.444961552002816 17.7895502264471 32.79839706658985 7 32.920128594838694 18.250134474174704 18.238500894409626 30.591236036576973 8 30.35864552892277 18.9943182116742 19.053871020127097 31.593165239275926 9 31.022046325011864 17.98587906004553 18.81420542934425 32.17786918559836 10-14 31.19322736416599 18.825328453479273 18.79134822184044 31.190095960514302 15-19 31.282114105740305 18.595914946185815 18.69173890063372 31.43023204744016 20-24 31.238427675214414 18.67828609512565 18.728258833176575 31.355027396483365 25-29 31.31820967810906 18.814579305664232 18.664453058477818 31.20275795774889 30-34 31.39295926488065 18.60728835346854 18.57834451976322 31.42140786188759 35-39 31.263518326406807 18.68917284522266 18.70013104830542 31.34717778006511 40-44 31.38476309778756 18.715828610791274 18.607943372001294 31.29146491941987 45-49 31.452713670131914 18.58258523392687 18.510717285331758 31.453983810609454 50-54 31.314439711423113 18.68304727579663 18.640703635576838 31.36180937720342 55-59 31.389511812445782 18.714398787385477 18.610665701391422 31.285423698777322 60-64 31.444689999999998 18.578364999999998 18.526485 31.450460000000003 65-69 31.324965 18.6838 18.63436 31.356875000000002 70-74 31.42921 18.71244 18.58699 31.271359999999998 75-79 31.45532614982644 18.588869097666947 18.54249883799349 31.413305914513124 80-84 31.33030368457038 18.665811167405476 18.662186029287717 31.341699118736422 85-89 31.412715000000002 18.715055 18.61276 31.25947 90-94 31.46672 18.584365 18.523725 31.425189999999997 95-99 31.358826654165146 18.669078769997306 18.64075333945076 31.331341236386795 100-101 31.5260354667899 18.767746113714377 18.569258390415687 31.136960029080036 >>END_MODULE >>Per base GC content pass #Base %GC 1 63.417967064508986 2 57.76431308952308 3 59.48939863701228 4 62.31066262266691 5 61.70012429381357 6 63.76548822155008 7 63.51136463141567 8 61.9518107681987 9 63.199915510610225 10-14 62.38332332468028 15-19 62.71234615318046 20-24 62.593455071697775 25-29 62.52096763585795 30-34 62.81436712676823 35-39 62.61069610647192 40-44 62.676228017207436 45-49 62.90669748074137 50-54 62.676249088626534 55-59 62.6749355112231 60-64 62.89515 65-69 62.68184 70-74 62.70057 75-79 62.86863206433956 80-84 62.6720028033068 85-89 62.672185 90-94 62.891909999999996 95-99 62.69016789055194 100-101 62.662995495869936 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 146.0 1 91.5 2 39.0 3 40.0 4 36.5 5 29.0 6 30.0 7 36.0 8 42.5 9 54.5 10 62.5 11 74.0 12 101.0 13 114.5 14 129.5 15 165.0 16 206.0 17 253.0 18 321.5 19 405.0 20 494.5 21 612.0 22 756.0 23 927.5 24 1143.5 25 1415.0 26 1737.5 27 2102.0 28 2598.0 29 3088.5 30 3683.0 31 4466.5 32 5219.0 33 5926.0 34 6881.5 35 7907.5 36 8628.5 37 9324.5 38 10205.5 39 11082.5 40 11896.5 41 12816.5 42 13991.5 43 15465.0 44 17108.5 45 19355.0 46 22284.0 47 25926.5 48 30565.5 49 36306.5 50 43028.0 51 50615.5 52 58868.0 53 67897.0 54 77739.0 55 87771.0 56 98738.0 57 110448.0 58 122221.5 59 133787.0 60 146354.0 61 159002.0 62 170618.5 63 182381.0 64 192504.0 65 200552.0 66 206370.5 67 207692.0 68 204567.0 69 197206.0 70 185344.0 71 169135.0 72 149048.5 73 127569.0 74 104716.5 75 81930.5 76 61006.0 77 42261.0 78 27413.0 79 16720.0 80 9401.5 81 4859.5 82 2463.5 83 1280.5 84 713.5 85 417.5 86 283.5 87 210.0 88 156.5 89 123.5 90 85.5 91 67.5 92 58.0 93 45.0 94 37.0 95 27.5 96 19.0 97 11.5 98 8.5 99 5.5 100 2.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.054625 2 0.059575 3 0.05412499999999999 4 0.04945 5 0.035250000000000004 6 0.0208 7 0.07375 8 0.08867499999999999 9 0.10579999999999999 10-14 0.044825000000000004 15-19 0.04587 20-24 0.025490000000000002 25-29 0.027475 30-34 0.047795 35-39 0.02923 40-44 0.014124999999999999 45-49 0.01106 50-54 0.020405 55-59 0.007795 60-64 0.0 65-69 0.0 70-74 0.0 75-79 5.6E-4 80-84 0.0038099999999999996 85-89 0.0 90-94 0.0 95-99 0.00152 100-101 1.125E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.22337825884892373 #Duplication Level Relative count 1 100.0 2 0.15476154701445444 3 0.00601015716560988 4 5.008464304674901E-4 5 0.00150253929140247 6 5.008464304674901E-4 7 5.008464304674901E-4 8 5.008464304674901E-4 9 0.0010016928609349802 10++ 0.004006771443739921 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position AAAAA 312095 3.487652 3.8547144 1 TTTTT 284040 3.257652 3.5511072 85-89 GATCG 1283555 3.0798821 4.15007 1 CGATC 1267945 3.0556967 3.458472 1 >>END_MODULE