##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002002_Airport_GTGGCC_L003_R2_011.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 62 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.46082575 34.0 31.0 34.0 31.0 34.0 2 32.6521705 34.0 31.0 34.0 31.0 34.0 3 32.67068925 34.0 31.0 34.0 31.0 34.0 4 36.0907775 37.0 37.0 37.0 35.0 37.0 5 36.094519 37.0 37.0 37.0 35.0 37.0 6 35.9689735 37.0 37.0 37.0 35.0 37.0 7 36.0197905 37.0 37.0 37.0 35.0 37.0 8 36.02638925 37.0 37.0 37.0 35.0 37.0 9 37.7568665 39.0 38.0 39.0 35.0 39.0 10-14 38.04438785 39.4 38.2 39.4 35.2 39.4 15-19 39.120416399999996 41.0 39.0 41.0 36.0 41.0 20-24 38.9115054 40.8 38.8 41.0 35.2 41.0 25-29 38.51942775 40.0 38.0 41.0 34.6 41.0 30-34 37.7840443 39.8 36.8 41.0 33.2 41.0 35-39 36.773908399999996 38.6 35.0 40.6 32.0 41.0 40-44 35.8043322 36.4 35.0 39.8 31.0 41.0 45-49 34.8445025 35.0 34.6 38.2 30.4 40.8 50-54 33.51804274999999 34.8 33.2 35.4 28.0 39.2 55-59 33.6922236 35.0 34.0 35.0 30.0 38.0 60-64 33.38396225 35.0 34.0 35.0 30.0 36.2 65-69 33.099606300000005 35.0 34.0 35.0 29.0 35.0 70-74 32.83616015 35.0 33.2 35.0 29.0 35.0 75-79 32.559617100000004 35.0 33.0 35.0 27.8 35.0 80-84 32.2770487 35.0 33.0 35.0 27.0 35.0 85-89 31.958914400000005 35.0 33.0 35.0 26.6 35.0 90-94 31.534067900000004 35.0 33.0 35.0 24.4 35.0 95-99 30.966395650000003 35.0 32.4 35.0 22.6 35.0 100-101 29.83410225 34.0 30.5 35.0 17.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 6680.0 3 1159.0 4 1543.0 5 1950.0 6 2626.0 7 3345.0 8 4167.0 9 4664.0 10 4957.0 11 5127.0 12 5389.0 13 5303.0 14 5370.0 15 5509.0 16 6049.0 17 6573.0 18 7639.0 19 8606.0 20 10099.0 21 12275.0 22 14639.0 23 17911.0 24 21760.0 25 26804.0 26 32782.0 27 40381.0 28 49233.0 29 60866.0 30 76446.0 31 97848.0 32 128448.0 33 181046.0 34 291683.0 35 681248.0 36 1363431.0 37 666913.0 38 122096.0 39 17334.0 40 101.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 34.446881696868004 19.032031400282815 17.5678288683586 28.95325803449058 2 32.13602470720239 22.75214117829539 19.47908731454275 25.63274679995947 3 29.818296153107287 20.39534506771684 20.152863157557714 29.63349562161816 4 31.740156455673397 18.958263472154794 18.751732974309437 30.54984709786237 5 31.656242943073693 19.140197227570447 19.13069421273899 30.072865616616873 6 31.028373276335664 18.485991062411696 17.750611002168696 32.73502465908394 7 32.88313705306226 18.252613259607653 18.26723289377634 30.597016793553745 8 30.390664027433996 18.958930384604308 19.068255715103096 31.582149872858594 9 31.019277372712402 17.996045667135917 18.826325360064143 32.15835160008754 10-14 31.19059925406807 18.83893207623892 18.80077628642433 31.169692383268675 15-19 31.26838069354899 18.606571043526003 18.710002319822916 31.415045943102086 20-24 31.197557199480535 18.658067662500578 18.76866288050063 31.375712257518256 25-29 31.299928653520542 18.787436016035 18.673102557337568 31.239532773106887 30-34 31.37308813574064 18.619297462184598 18.595465860028824 31.412148542045937 35-39 31.249802154786295 18.691455632188784 18.70648811781028 31.352254095214644 40-44 31.386388483718935 18.71768803673209 18.621654338507383 31.274269141041593 45-49 31.43779781160031 18.578342857620093 18.543926099889713 31.43993323088988 50-54 31.30716751903352 18.66507101817822 18.67977576560593 31.347985697182335 55-59 31.37069441948823 18.69999391713132 18.647394111062777 31.281917552317672 60-64 31.450574999999997 18.572015 18.536175 31.441235 65-69 31.283503930921224 18.69034592786801 18.661950774534183 31.36419936667658 70-74 31.396048490121224 18.714521786304466 18.61741154352886 31.272018180045453 75-79 31.442940951263232 18.6038568552624 18.53692141683528 31.416280776639088 80-84 31.303998221801287 18.663815681402397 18.684838030649924 31.34734806614639 85-89 31.41367 18.724215 18.60426 31.257855 90-94 31.473174999999998 18.60437 18.52298 31.399475 95-99 31.37025993839443 18.674857072789113 18.635180907112968 31.3197020817035 100-101 31.542015330259883 18.767211290043733 18.5535222132758 31.137251166420587 >>END_MODULE >>Per base GC content pass #Base %GC 1 63.400139731358585 2 57.768771507161865 3 59.45179177472545 4 62.29000355353577 5 61.72910855969056 6 63.763397935419604 7 63.480153846616005 8 61.97281390029259 9 63.17762897279994 10-14 62.36029163733675 15-19 62.683426636651085 20-24 62.573269456998794 25-29 62.539461426627426 30-34 62.785236677786585 35-39 62.602056250000935 40-44 62.66065762476053 45-49 62.87773104249019 50-54 62.65515321621585 55-59 62.652611971805904 60-64 62.89181000000001 65-69 62.647703297597815 70-74 62.66806667016668 75-79 62.859221727902316 80-84 62.651346287947675 85-89 62.671524999999995 90-94 62.87264999999999 95-99 62.68996202009792 100-101 62.67926649668046 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 78.0 1 51.0 2 22.0 3 18.5 4 17.5 5 23.0 6 29.5 7 28.5 8 35.0 9 44.0 10 51.5 11 74.5 12 101.5 13 124.5 14 140.0 15 161.0 16 217.0 17 259.0 18 311.5 19 423.5 20 525.5 21 616.0 22 795.5 23 958.5 24 1156.5 25 1458.5 26 1750.0 27 2154.5 28 2687.0 29 3235.0 30 3787.0 31 4491.5 32 5315.0 33 6129.5 34 6884.5 35 7714.0 36 8647.0 37 9413.0 38 10208.5 39 11140.5 40 11956.0 41 12737.5 42 13877.0 43 15403.0 44 17074.5 45 19309.5 46 22502.0 47 26279.0 48 30825.5 49 36473.0 50 42969.0 51 50614.5 52 59029.5 53 68190.5 54 78162.0 55 88554.5 56 99189.5 57 110242.5 58 122317.5 59 133951.5 60 145703.5 61 158511.5 62 171154.0 63 182938.0 64 193012.0 65 201446.0 66 206596.0 67 207564.0 68 204790.5 69 197200.0 70 184840.5 71 168486.5 72 148708.5 73 126789.5 74 104083.5 75 81418.5 76 60448.0 77 42066.0 78 27167.0 79 16372.0 80 9089.5 81 4730.5 82 2427.0 83 1297.5 84 707.0 85 413.0 86 280.0 87 208.0 88 145.0 89 116.5 90 97.5 91 75.0 92 57.5 93 46.0 94 38.0 95 24.5 96 16.0 97 15.5 98 11.5 99 6.5 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.058225 2 0.069625 3 0.0544 4 0.0995 5 0.031724999999999996 6 0.112875 7 0.1343 8 0.160375 9 0.16015000000000001 10-14 0.080695 15-19 0.07858 20-24 0.058969999999999995 25-29 0.05113 30-34 0.090645 35-39 0.016535 40-44 0.03509 45-49 0.019635 50-54 0.032285 55-59 0.04716 60-64 0.0 65-69 5.4E-4 70-74 2.5E-4 75-79 6.55E-4 80-84 0.011175000000000001 85-89 0.0 90-94 0.0 95-99 0.015540000000000002 100-101 0.0065875000000000005 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.21838862180288415 #Duplication Level Relative count 1 100.0 2 0.15726341622217213 3 0.0025041945258307665 4 0.0010016778103323065 5 5.008389051661533E-4 6 5.008389051661533E-4 7 5.008389051661533E-4 8 5.008389051661533E-4 9 0.0 10++ 0.005008389051661533 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position AAAAA 303270 3.3888037 3.8543499 60-64 TTTTT 282850 3.228331 3.5131884 9 GATCG 1284330 3.080791 4.3600116 1 CGATC 1273915 3.0719488 3.4657152 1 >>END_MODULE