##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002002_Airport_GTGGCC_L003_R2_010.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 62 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.61532875 34.0 31.0 34.0 31.0 34.0 2 32.79020825 34.0 31.0 34.0 31.0 34.0 3 32.82703975 34.0 31.0 34.0 31.0 34.0 4 36.2133405 37.0 37.0 37.0 35.0 37.0 5 36.050581 37.0 37.0 37.0 35.0 37.0 6 36.13596675 37.0 37.0 37.0 35.0 37.0 7 36.16834575 37.0 37.0 37.0 35.0 37.0 8 36.14913225 37.0 37.0 37.0 35.0 37.0 9 37.91937625 39.0 39.0 39.0 37.0 39.0 10-14 38.01585585 39.4 38.6 39.4 35.8 39.4 15-19 39.295076949999995 41.0 39.8 41.0 36.6 41.0 20-24 38.20712965 40.6 38.4 41.0 32.2 41.0 25-29 38.40643235 40.0 38.0 41.0 34.6 41.0 30-34 37.9455161 40.0 37.0 41.0 33.4 41.0 35-39 36.545646500000004 38.4 35.0 40.6 31.4 41.0 40-44 35.650827449999994 36.4 35.0 39.8 30.6 41.0 45-49 34.3239866 35.0 33.8 38.2 28.2 40.8 50-54 33.556881450000006 34.8 33.2 35.4 28.4 39.2 55-59 33.7380822 35.0 34.2 35.0 30.0 38.0 60-64 33.42962659999999 35.0 34.0 35.0 30.0 36.2 65-69 33.11973844999999 35.0 34.0 35.0 29.4 35.0 70-74 32.808266200000006 35.0 33.4 35.0 29.0 35.0 75-79 32.282626 35.0 33.0 35.0 27.0 35.0 80-84 32.14941035 35.0 33.0 35.0 27.0 35.0 85-89 31.825376700000003 35.0 33.0 35.0 25.8 35.0 90-94 31.361164600000002 35.0 33.0 35.0 24.0 35.0 95-99 30.70855375 35.0 31.8 35.0 21.0 35.0 100-101 29.397555750000002 34.0 30.0 35.0 8.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 7919.0 3 1270.0 4 1869.0 5 2305.0 6 2961.0 7 3636.0 8 4432.0 9 4952.0 10 5178.0 11 5531.0 12 5691.0 13 5704.0 14 5878.0 15 6079.0 16 6192.0 17 7042.0 18 7831.0 19 8867.0 20 10303.0 21 12207.0 22 14914.0 23 18006.0 24 21511.0 25 25779.0 26 31745.0 27 38433.0 28 47301.0 29 59051.0 30 74271.0 31 96133.0 32 130384.0 33 191054.0 34 337932.0 35 783695.0 36 1301684.0 37 588425.0 38 108946.0 39 14784.0 40 105.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 34.43510659116969 19.029525601350578 17.565107627225956 28.97026018025377 2 32.1352702562008 22.681709153231942 19.486482184474184 25.69653840609308 3 29.80804263139141 20.392292478249903 20.106853732849153 29.692811157509542 4 31.73219712710723 18.930425726859895 18.787532106003635 30.54984504002924 5 31.96629117912827 19.134779245549236 19.035612109398063 29.863317465924432 6 30.947405582429464 18.38325872066821 17.812822361766266 32.85651333513606 7 32.918053118533685 18.224151135817767 18.24834464784916 30.60945109779939 8 30.331604781955257 18.94438530620262 19.091770219829744 31.63223969201238 9 31.060385129955055 17.9594275664056 18.807530227640566 32.17265707599878 10-14 31.3141500046328 18.886767515790453 18.72915707547786 31.069925404098882 15-19 31.322090177603258 18.60680855285528 18.68201687239208 31.389084397149382 20-24 31.497653976290252 18.678384124563998 18.667655098234146 31.156306800911608 25-29 31.358480916886172 18.789836550548035 18.656896261839375 31.194786270726414 30-34 31.360847710500757 18.61983197989366 18.59452883277093 31.424791476834653 35-39 31.46541522358778 18.76768482296821 18.612771625776293 31.154128327667717 40-44 31.461414745311743 18.797877117599405 18.559857303176518 31.180850833912327 45-49 31.434896636254013 18.605309212891722 18.631274448387554 31.32851970246671 50-54 31.301000165943073 18.666724232285677 18.643161016856304 31.38911458491495 55-59 31.387822629977375 18.707953043401858 18.61838662771062 31.28583769891014 60-64 31.433108859865317 18.578486147091688 18.516806110083667 31.471598882959327 65-69 31.329230000000003 18.66932 18.648275 31.353175 70-74 31.40548095151 18.722309316849564 18.583559025473953 31.288650706166482 75-79 31.559145556596192 18.594565793873137 18.48719310418726 31.35909554534341 80-84 31.32942157098532 18.666024925194762 18.63294763330576 31.37160587051416 85-89 31.445460722730363 18.693414346707176 18.582049291024646 31.27907563953782 90-94 31.50656 18.56314 18.493085 31.437215000000002 95-99 31.38296145807238 18.6409775497469 18.624978200323756 31.351082791856967 100-101 31.691100319497767 18.74651510400805 18.496215184170033 31.06616939232415 >>END_MODULE >>Per base GC content pass #Base %GC 1 63.405366771423466 2 57.831808662293874 3 59.50085378890094 4 62.282042167136474 5 61.8296086450527 6 63.803918917565525 7 63.52750421633308 8 61.96384447396763 9 63.23304220595383 10-14 62.38407540873169 15-19 62.71117457475264 20-24 62.65396077720185 25-29 62.55326718761259 30-34 62.785639187335406 35-39 62.6195435512555 40-44 62.64226557922407 45-49 62.763416338720724 50-54 62.690114750858015 55-59 62.673660328887514 60-64 62.90470774282465 65-69 62.682404999999996 70-74 62.69413165767648 75-79 62.9182411019396 80-84 62.70102744149948 85-89 62.72453636226818 90-94 62.943775 95-99 62.73404424992934 100-101 62.75726971182192 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 84.0 1 68.5 2 40.5 3 25.5 4 20.5 5 22.5 6 30.0 7 32.0 8 35.0 9 45.0 10 61.0 11 73.5 12 85.5 13 121.0 14 173.5 15 219.0 16 266.5 17 340.5 18 434.0 19 524.5 20 599.0 21 680.0 22 804.5 23 993.5 24 1236.5 25 1502.0 26 1805.5 27 2155.5 28 2604.0 29 3210.0 30 3865.5 31 4535.5 32 5337.0 33 6135.0 34 6948.0 35 7821.5 36 8602.5 37 9366.5 38 10361.0 39 11182.5 40 11973.5 41 13004.0 42 14110.0 43 15422.5 44 17127.0 45 19363.5 46 22047.0 47 25708.0 48 30477.5 49 36178.5 50 42670.0 51 50323.5 52 59015.5 53 68132.0 54 78004.5 55 88388.5 56 99187.5 57 110622.5 58 122102.5 59 133931.0 60 146360.5 61 158998.5 62 171527.5 63 182668.5 64 192399.5 65 200512.0 66 205707.0 67 206751.5 68 204206.5 69 196576.0 70 183992.5 71 168341.5 72 148706.5 73 126407.0 74 103574.5 75 81254.0 76 60449.5 77 42385.5 78 27803.0 79 17012.5 80 9734.5 81 5449.5 82 3050.5 83 1739.0 84 1054.0 85 734.0 86 562.0 87 428.5 88 333.5 89 249.5 90 191.5 91 152.0 92 123.0 93 100.5 94 80.5 95 64.0 96 50.5 97 33.5 98 19.5 99 12.5 100 6.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.10195 2 0.1096 3 0.0924 4 0.1355 5 0.0677 6 0.151 7 0.17985 8 0.210275 9 0.21549999999999997 10-14 0.114485 15-19 0.11078500000000001 20-24 0.08413 25-29 0.07919999999999999 30-34 0.131 35-39 0.03434 40-44 0.05664 45-49 0.03942 50-54 0.056085 55-59 0.06857 60-64 5.9999999999999995E-5 65-69 0.0 70-74 2.0999999999999998E-4 75-79 0.002505 80-84 0.022045 85-89 4.9999999999999996E-5 90-94 0.0 95-99 0.027185 100-101 0.01495 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.2223454698984162 #Duplication Level Relative count 1 100.0 2 0.1412160605726762 3 0.002503830861217663 4 0.0010015323444870652 5 0.0015022985167305978 6 0.0 7 0.0010015323444870652 8 5.007661722435326E-4 9 5.007661722435326E-4 10++ 0.005007661722435326 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position AAAAA 308735 3.439849 3.768898 60-64 TTTTT 288325 3.3201592 3.7323155 85-89 GATCG 1278370 3.0644953 4.224895 1 CGATC 1262365 3.0481534 3.4014697 1 >>END_MODULE