##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002002_Airport_GTGGCC_L003_R2_009.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 62 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.48083875 34.0 31.0 34.0 31.0 34.0 2 32.63289275 34.0 31.0 34.0 31.0 34.0 3 32.67342125 34.0 31.0 34.0 31.0 34.0 4 36.07726075 37.0 37.0 37.0 35.0 37.0 5 36.08029975 37.0 37.0 37.0 35.0 37.0 6 36.08801925 37.0 37.0 37.0 35.0 37.0 7 36.089339 37.0 37.0 37.0 35.0 37.0 8 36.0684305 37.0 37.0 37.0 35.0 37.0 9 37.80511275 39.0 38.0 39.0 35.0 39.0 10-14 38.0390388 39.4 38.2 39.4 35.2 39.4 15-19 39.166690800000005 41.0 39.0 41.0 36.0 41.0 20-24 38.93275 41.0 39.0 41.0 35.4 41.0 25-29 38.51019565 40.0 38.0 41.0 34.6 41.0 30-34 37.802564350000004 39.8 36.8 41.0 33.2 41.0 35-39 36.761546550000006 38.6 35.0 40.6 32.0 41.0 40-44 35.7950443 36.4 35.0 39.8 31.0 41.0 45-49 34.834901499999994 35.0 34.8 38.4 30.4 40.8 50-54 33.52859525 34.8 33.2 35.4 28.0 39.2 55-59 33.64740995 35.0 34.0 35.0 30.0 38.0 60-64 33.33195985 35.0 34.0 35.0 29.4 36.2 65-69 33.0345115 35.0 34.0 35.0 29.0 35.0 70-74 32.764792150000005 35.0 33.2 35.0 28.6 35.0 75-79 32.49131190000001 35.0 33.0 35.0 27.2 35.0 80-84 32.197472149999996 35.0 33.0 35.0 27.0 35.0 85-89 31.90369725 35.0 33.0 35.0 26.0 35.0 90-94 31.49892325 35.0 33.0 35.0 24.2 35.0 95-99 30.890107 35.0 32.4 35.0 22.0 35.0 100-101 29.710072875 34.0 30.5 35.0 10.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 7428.0 3 1331.0 4 1835.0 5 2454.0 6 3016.0 7 3787.0 8 4496.0 9 5092.0 10 5471.0 11 5636.0 12 5954.0 13 5669.0 14 5880.0 15 5946.0 16 6392.0 17 7031.0 18 7929.0 19 8789.0 20 10351.0 21 12530.0 22 14841.0 23 18557.0 24 22338.0 25 27109.0 26 32838.0 27 40206.0 28 49178.0 29 60282.0 30 74770.0 31 95174.0 32 125361.0 33 174523.0 34 281286.0 35 665862.0 36 1371977.0 37 685014.0 38 125427.0 39 18151.0 40 89.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 34.404994786045165 19.05865029765964 17.61072991113379 28.925625005161404 2 32.0747653635395 22.736351847838762 19.535746870387786 25.653135918233954 3 29.747247522770493 20.404413972575316 20.209063156841157 29.639275347813033 4 31.692049456215344 18.999870631725056 18.796184411598304 30.511895500461293 5 31.668048384566166 19.158167203964332 19.192074135817407 29.981710275652095 6 30.967864718613097 18.472572548089882 17.824480113077936 32.73508262021909 7 32.82591982921655 18.329034236218757 18.29127020688186 30.553775727682837 8 30.32282012434957 19.05279316284981 19.095615398295564 31.528771314505054 9 31.012342368326852 17.99570785067083 18.87647650512279 32.11547327587954 10-14 31.1673220812372 18.873014008333076 18.819987716384205 31.139676194045524 15-19 31.233960404140305 18.657096870407166 18.721120225679076 31.387822499773456 20-24 31.16481191182206 18.721653559194596 18.78044978865511 31.33308474032824 25-29 31.266507838054018 18.817115206482864 18.727761610666946 31.188615344796165 30-34 31.353362157409865 18.640619143364315 18.641774373543928 31.364244325681895 35-39 31.24704641821753 18.73771533739423 18.71488422209425 31.30035402229399 40-44 31.372435088941852 18.743681682982384 18.653869511480494 31.230013716595266 45-49 31.42225253487928 18.602573731260293 18.5752023353191 31.399971398541325 50-54 31.295952295195185 18.708415571487226 18.672667570442538 31.322964562875054 55-59 31.373883358987374 18.744837646449824 18.65376920440525 31.227509790157548 60-64 31.415159424547827 18.639085591725678 18.55837556751267 31.38737941621382 65-69 31.28986862687598 18.69829381689563 18.692583789773 31.31925376645539 70-74 31.39024755609902 18.729342491736997 18.652432460972985 31.227977491190995 75-79 31.42240810988339 18.625529646583608 18.562779310869313 31.389282932663694 80-84 31.290622590545485 18.703367211117968 18.696036969219985 31.30997322911656 85-89 31.40161285040321 18.738739684684923 18.643144660786167 31.2165028041257 90-94 31.478581573929077 18.602780930139044 18.543960927198047 31.37467656873383 95-99 31.346412355822107 18.691859075529425 18.656522753950995 31.305205814697466 100-101 31.559021294569522 18.800342457148794 18.58990056417428 31.050735684107405 >>END_MODULE >>Per base GC content pass #Base %GC 1 63.33061979120658 2 57.727901281773455 3 59.386522870583526 4 62.20394495667664 5 61.649758660218254 6 63.70294733883218 7 63.379695556899385 8 61.851591438854626 9 63.127815644206386 10-14 62.30699827528272 15-19 62.62178290391376 20-24 62.497896652150295 25-29 62.455123182850194 30-34 62.71760648309176 35-39 62.54740044051152 40-44 62.60244880553712 45-49 62.82222393342061 50-54 62.618916858070236 55-59 62.601393149144926 60-64 62.802538840761656 65-69 62.609122393331376 70-74 62.618225047290025 75-79 62.81169104254708 80-84 62.600595819662054 85-89 62.618115654528914 90-94 62.8532581426629 95-99 62.651618170519576 100-101 62.609756978676934 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 138.0 1 90.0 2 45.5 3 47.0 4 43.0 5 48.0 6 48.0 7 48.0 8 59.0 9 66.0 10 82.5 11 100.5 12 115.5 13 136.5 14 162.5 15 199.0 16 231.5 17 290.0 18 366.0 19 434.5 20 517.0 21 610.5 22 786.5 23 959.0 24 1125.0 25 1405.5 26 1754.5 27 2147.0 28 2627.0 29 3204.5 30 3843.0 31 4554.0 32 5296.0 33 6107.5 34 6910.0 35 7746.5 36 8706.0 37 9484.5 38 10309.5 39 11258.0 40 12025.0 41 12946.0 42 14140.5 43 15524.5 44 17240.0 45 19530.0 46 22539.0 47 26219.0 48 30876.5 49 36435.0 50 43087.0 51 51031.5 52 59486.5 53 68642.5 54 78387.0 55 88931.5 56 99991.5 57 111259.5 58 123146.5 59 134891.5 60 146857.5 61 159606.5 62 171916.0 63 182576.0 64 192629.0 65 201180.0 66 206039.5 67 207022.5 68 203963.5 69 196292.5 70 184209.0 71 167335.0 72 147432.0 73 125866.5 74 102696.0 75 80287.5 76 59654.0 77 41651.5 78 27196.0 79 16380.5 80 9083.5 81 4822.5 82 2590.0 83 1436.0 84 836.0 85 517.0 86 357.0 87 278.5 88 220.5 89 166.5 90 126.5 91 88.0 92 70.0 93 74.5 94 55.0 95 35.0 96 33.0 97 21.5 98 12.0 99 13.0 100 7.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.099825 2 0.09545000000000001 3 0.09 4 0.091425 5 0.094175 6 0.03355 7 0.037149999999999996 8 0.051925 9 0.061724999999999995 10-14 0.021295 15-19 0.02086 20-24 0.010595 25-29 0.00962 30-34 0.019925 35-39 0.0048850000000000005 40-44 0.007985 45-49 0.0051 50-54 0.008395 55-59 0.00927 60-64 2.9999999999999997E-5 65-69 4.7500000000000005E-4 70-74 3.9999999999999996E-5 75-79 5.35E-4 80-84 0.0033000000000000004 85-89 2.4999999999999998E-5 90-94 4.9999999999999996E-6 95-99 0.0037400000000000003 100-101 0.0020875 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.20590837077500765 #Duplication Level Relative count 1 100.0 2 0.15424911231639096 3 0.004006470449776389 4 5.008088062220486E-4 5 5.008088062220486E-4 6 0.0 7 0.0010016176124440972 8 0.0 9 0.0 10++ 0.0015024264186661459 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position AAAAA 315915 3.5089982 3.9952283 1 TTTTT 297480 3.3739953 3.8373828 95-97 GATCG 1280880 3.0711188 4.1433215 1 CGATC 1269580 3.059051 3.5813136 1 >>END_MODULE