##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002002_Airport_GTGGCC_L003_R2_005.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 62 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.628044 34.0 31.0 34.0 31.0 34.0 2 32.76800925 34.0 31.0 34.0 31.0 34.0 3 32.82513825 34.0 31.0 34.0 31.0 34.0 4 36.215299 37.0 37.0 37.0 35.0 37.0 5 36.2274525 37.0 37.0 37.0 35.0 37.0 6 36.20203075 37.0 37.0 37.0 35.0 37.0 7 36.190566 37.0 37.0 37.0 35.0 37.0 8 36.1552835 37.0 37.0 37.0 35.0 37.0 9 37.9124295 39.0 39.0 39.0 35.0 39.0 10-14 38.1952795 39.4 39.0 39.4 35.4 39.4 15-19 39.34744075 41.0 40.0 41.0 36.6 41.0 20-24 39.13908075 41.0 39.0 41.0 35.8 41.0 25-29 38.70425885 40.2 38.4 41.0 35.0 41.0 30-34 37.98155715 40.0 37.0 41.0 33.4 41.0 35-39 36.9481488 38.6 35.0 40.6 32.6 41.0 40-44 35.95866635 36.4 35.0 39.8 31.8 41.0 45-49 34.97199855 35.0 34.8 38.4 30.8 40.8 50-54 33.62766325 34.8 33.2 35.4 28.6 39.2 55-59 33.85133685 35.0 34.8 35.0 31.0 38.0 60-64 33.4793634 35.0 34.0 35.0 30.0 36.2 65-69 33.148661700000005 35.0 34.0 35.0 29.4 35.0 70-74 32.86865400000001 35.0 33.6 35.0 29.0 35.0 75-79 32.61090595 35.0 33.0 35.0 28.2 35.0 80-84 32.28856585 35.0 33.0 35.0 27.0 35.0 85-89 31.936584950000004 35.0 33.0 35.0 26.6 35.0 90-94 31.494995800000005 35.0 33.0 35.0 24.2 35.0 95-99 30.899348149999998 35.0 32.4 35.0 22.2 35.0 100-101 29.677036125 34.0 30.5 35.0 10.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 6338.0 3 1222.0 4 1754.0 5 2193.0 6 2622.0 7 3467.0 8 3915.0 9 4520.0 10 4865.0 11 5200.0 12 5228.0 13 5375.0 14 5554.0 15 5854.0 16 6144.0 17 6851.0 18 7524.0 19 8748.0 20 10107.0 21 11775.0 22 14134.0 23 16939.0 24 20266.0 25 24632.0 26 29834.0 27 36763.0 28 44893.0 29 55900.0 30 69808.0 31 89362.0 32 118951.0 33 169017.0 34 280384.0 35 686453.0 36 1395531.0 37 689937.0 38 128790.0 39 19022.0 40 128.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 34.4690130149292 18.99627007817768 17.55421051656739 28.980506390325733 2 32.13905607452546 22.680782581429646 19.466439042285934 25.713722301758956 3 29.82098620237517 20.3951365499432 20.134322905458493 29.649554342223134 4 31.7279465208557 18.915084744617722 18.778549594885675 30.578419139640907 5 31.685938586703628 19.10236716885404 19.14194507127525 30.069749173167082 6 31.010596110052933 18.396233028298354 17.79712870553409 32.796042156114616 7 32.87770295784142 18.2127199901442 18.290094020715205 30.619483031299172 8 30.404515130928978 18.944472165944237 19.071197829306367 31.579814873820418 9 31.052685759198262 17.995672408485767 18.803257390505898 32.14838444181007 10-14 31.19811011654832 18.816845453519214 18.79047859576333 31.194565834169136 15-19 31.268901936789472 18.575968932735403 18.7227453026607 31.43238382781442 20-24 31.206351171181186 18.65851917715286 18.74340206303689 31.391727588629063 25-29 31.324262625349903 18.76336291342571 18.679242196068564 31.233132265155827 30-34 31.381409411988926 18.60842557750873 18.583601130393212 31.426563880109132 35-39 31.295061500226694 18.68390025198868 18.670962104837415 31.350076142947213 40-44 31.398620579805513 18.70556055785321 18.596674497865227 31.29914436447605 45-49 31.44769221565345 18.556494551999855 18.516187534377014 31.47962569796968 50-54 31.309276201276067 18.636028183263555 18.630569878532956 31.424125736927422 55-59 31.395745750826237 18.687389414720933 18.616693881436923 31.30017095301591 60-64 31.457193411651012 18.578776746617685 18.50312141373422 31.46090842799708 65-69 31.32518728900284 18.662320194132263 18.634825157013964 31.377667359850935 70-74 31.417965708982855 18.692689346344675 18.59565429782715 31.293690646845324 75-79 31.468777409840687 18.55919125405428 18.52013113717897 31.451900198926058 80-84 31.331847994056776 18.672388163685135 18.647031233636152 31.348732608621937 85-89 31.442506006187394 18.69351823776902 18.57274446962745 31.29123128641614 90-94 31.507971254642342 18.56430014742286 18.466363247447003 31.461365350487803 95-99 31.39379915423052 18.63564668335839 18.60199715549458 31.368557006916507 100-101 31.618843246168133 18.70643219462966 18.496316537249957 31.178408021952247 >>END_MODULE >>Per base GC content pass #Base %GC 1 63.449519405254925 2 57.85277837628442 3 59.47054054459831 4 62.30636566049661 5 61.75568775987072 6 63.80663826616756 7 63.49718598914059 8 61.9843300047494 9 63.201070201008335 10-14 62.39267595071746 15-19 62.701285764603895 20-24 62.59807875981025 25-29 62.557394890505726 30-34 62.80797329209806 35-39 62.64513764317391 40-44 62.697764944281566 45-49 62.92731791362313 50-54 62.73340193820348 55-59 62.695916703842144 60-64 62.9181018396481 65-69 62.70285464885378 70-74 62.71165635582818 75-79 62.92067760876675 80-84 62.68058060267872 85-89 62.73373729260353 90-94 62.969336605130145 95-99 62.762356161147025 100-101 62.79725126812038 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 10.0 1 8.5 2 8.5 3 14.5 4 15.0 5 14.0 6 20.0 7 25.5 8 32.0 9 49.0 10 74.0 11 89.0 12 118.5 13 159.5 14 185.0 15 229.0 16 293.5 17 352.0 18 438.5 19 510.0 20 600.0 21 696.0 22 791.5 23 950.0 24 1132.5 25 1436.0 26 1807.5 27 2124.0 28 2559.0 29 3106.0 30 3748.5 31 4467.5 32 5208.5 33 6063.5 34 6899.0 35 7731.5 36 8578.0 37 9517.0 38 10408.0 39 11094.5 40 11933.5 41 12848.5 42 13867.0 43 15332.5 44 17042.0 45 19278.5 46 22197.0 47 25786.0 48 30540.5 49 36336.5 50 42722.5 51 50116.5 52 58685.5 53 68066.5 54 78062.5 55 88564.0 56 99232.5 57 110171.0 58 121601.5 59 133399.0 60 146592.0 61 159364.0 62 170758.5 63 182161.5 64 192736.0 65 200546.5 66 205251.0 67 206655.5 68 204127.5 69 196780.0 70 184888.0 71 168548.5 72 148533.0 73 126960.5 74 104421.0 75 81853.0 76 60911.5 77 42645.0 78 27970.0 79 17278.5 80 9849.0 81 5400.0 82 2902.0 83 1628.5 84 1005.0 85 688.5 86 487.5 87 352.0 88 306.0 89 252.5 90 189.5 91 144.0 92 114.0 93 87.5 94 77.0 95 65.5 96 41.5 97 32.0 98 22.5 99 17.5 100 10.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.11854999999999999 2 0.09857500000000001 3 0.0915 4 0.080675 5 0.07050000000000001 6 0.1426 7 0.1603 8 0.1978 9 0.186975 10-14 0.12082499999999999 15-19 0.09290999999999999 20-24 0.06819499999999999 25-29 0.066235 30-34 0.09848000000000001 35-39 0.06297 40-44 0.051484999999999996 45-49 0.04222 50-54 0.060545 55-59 0.057335000000000004 60-64 4.4E-4 65-69 1.35E-4 70-74 4.9999999999999996E-5 75-79 0.0131 80-84 0.027329999999999997 85-89 0.00312 90-94 0.00194 95-99 0.028315000000000003 100-101 0.01935 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.2183777084832429 #Duplication Level Relative count 1 100.0 2 0.1497433329159885 3 0.0035056967572304996 4 0.0015024414673844998 5 0.001001627644923 6 0.0 7 0.001001627644923 8 0.001001627644923 9 5.008138224615E-4 10++ 0.0045073244021535 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position AAAAA 293865 3.3009748 3.7575603 60-64 TTTTT 284790 3.2815273 3.596866 95-97 GATCG 1286905 3.0894666 4.2494006 1 CGATC 1277910 3.0818694 3.551473 1 >>END_MODULE