##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002002_Airport_GTGGCC_L003_R2_003.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 62 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.64358525 34.0 31.0 34.0 31.0 34.0 2 32.82468025 34.0 31.0 34.0 31.0 34.0 3 32.84999525 34.0 31.0 34.0 31.0 34.0 4 36.24953425 37.0 37.0 37.0 35.0 37.0 5 36.24404525 37.0 37.0 37.0 35.0 37.0 6 36.20791425 37.0 37.0 37.0 35.0 37.0 7 36.207791 37.0 37.0 37.0 35.0 37.0 8 36.17275225 37.0 37.0 37.0 35.0 37.0 9 37.9429395 39.0 39.0 39.0 37.0 39.0 10-14 38.237226050000004 39.4 39.2 39.4 37.0 39.4 15-19 39.3772935 41.0 40.0 41.0 37.0 41.0 20-24 39.15205540000001 41.0 39.0 41.0 35.8 41.0 25-29 38.71482555 40.4 38.4 41.0 35.0 41.0 30-34 37.9847236 40.0 37.0 41.0 33.6 41.0 35-39 36.93939725 38.6 35.0 40.8 32.6 41.0 40-44 35.927083550000006 36.4 35.0 39.8 31.6 41.0 45-49 34.91685269999999 35.0 34.8 38.4 30.6 40.8 50-54 33.5402153 34.8 33.2 35.4 28.2 39.2 55-59 33.7960377 35.0 34.6 35.0 30.4 38.0 60-64 33.42061705 35.0 34.0 35.0 30.0 36.2 65-69 33.0636947 35.0 34.0 35.0 29.2 35.0 70-74 32.76696315 35.0 33.2 35.0 29.0 35.0 75-79 32.4520234 35.0 33.0 35.0 27.2 35.0 80-84 32.09597325 35.0 33.0 35.0 27.0 35.0 85-89 31.7283464 35.0 33.0 35.0 25.0 35.0 90-94 31.251705749999996 35.0 32.8 35.0 23.8 35.0 95-99 30.569104400000004 35.0 31.6 35.0 19.8 35.0 100-101 29.327204625 34.0 30.0 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 6698.0 3 1225.0 4 1895.0 5 2328.0 6 2932.0 7 3630.0 8 4235.0 9 4863.0 10 5165.0 11 5408.0 12 5683.0 13 5700.0 14 5868.0 15 6120.0 16 6542.0 17 7129.0 18 8168.0 19 9318.0 20 10731.0 21 12451.0 22 14923.0 23 17846.0 24 21439.0 25 25709.0 26 30809.0 27 37877.0 28 46219.0 29 57223.0 30 71664.0 31 92085.0 32 121789.0 33 174809.0 34 289185.0 35 685736.0 36 1364634.0 37 685691.0 38 127896.0 39 18244.0 40 133.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 34.43364935909535 19.039196239532075 17.545938217021934 28.981216184350643 2 32.131193727506016 22.683670017494766 19.50303556201434 25.68210069298488 3 29.77278504066863 20.361184273728703 20.17545351927757 29.690577166325095 4 31.738952065999932 18.91651949429405 18.784264480010407 30.560263959695614 5 31.69439170870792 19.129078068127345 19.127977206152416 30.04855301701232 6 30.961697728530023 18.408470911856167 17.77038772087423 32.859443638739585 7 32.82663214626018 18.22275681649445 18.28996239693725 30.660648640308118 8 30.382514373165613 18.966765703244054 19.060799505301524 31.58992041828881 9 31.018147443848427 17.95800930165454 18.808999481014965 32.21484377348207 10-14 31.196365719636255 18.818187060951068 18.814067027093703 31.171380192318978 15-19 31.247735083224338 18.588590433892254 18.71608129191003 31.44759319097338 20-24 31.193495157474764 18.675047787781722 18.74697088860706 31.384486166136462 25-29 31.279914243936975 18.77342312536821 18.691694695407122 31.25496793528769 30-34 31.36334511915267 18.617371679366386 18.59484749853205 31.424435702948898 35-39 31.255035158999085 18.706509646667982 18.69037512487995 31.348080069452987 40-44 31.378329001353244 18.69792188509739 18.605011204155737 31.31873790939363 45-49 31.44049412036581 18.572296066054786 18.52970879691715 31.45750101666226 50-54 31.311107733711836 18.65605434006424 18.64567367325823 31.387164252965693 55-59 31.393328584004525 18.705555724006956 18.611104523160282 31.29001116882823 60-64 31.450408870245322 18.576346145807687 18.50808110484866 31.46516387909833 65-69 31.319304999999996 18.6872 18.627959999999998 31.365535 70-74 31.433385 18.703775 18.573895 31.288945000000002 75-79 31.465354386617584 18.56508247003067 18.532220465448393 31.437342677903352 80-84 31.350075755916208 18.66490337982317 18.61461949644297 31.370401367817653 85-89 31.459932470908836 18.69518023849332 18.56281005979358 31.282077230804262 90-94 31.537851576892578 18.552070927603545 18.473390923669548 31.436686571834326 95-99 31.40025984484831 18.641429663814662 18.60557933712806 31.352731154208968 100-101 31.623798917308203 18.711893545516222 18.500008188383323 31.16429934879225 >>END_MODULE >>Per base GC content pass #Base %GC 1 63.414865543445984 2 57.81329442049089 3 59.46336220699372 4 62.29921602569555 5 61.742944725720236 6 63.821141367269604 7 63.4872807865683 8 61.972434791454425 9 63.23299121733049 10-14 62.36774591195523 15-19 62.69532827419771 20-24 62.57798132361122 25-29 62.534882179224674 30-34 62.78778082210157 35-39 62.60311522845207 40-44 62.69706691074687 45-49 62.89799513702806 50-54 62.698271986677526 55-59 62.68333975283276 60-64 62.91557274934365 65-69 62.684839999999994 70-74 62.72233000000001 75-79 62.90269706452094 80-84 62.720477123733865 85-89 62.742009701713094 90-94 62.97453814872691 95-99 62.75299099905728 100-101 62.788098266100455 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 12.0 1 11.5 2 10.5 3 11.0 4 15.5 5 14.0 6 12.5 7 20.0 8 24.5 9 38.0 10 53.0 11 76.5 12 101.0 13 120.5 14 157.5 15 215.0 16 284.0 17 330.5 18 392.0 19 490.5 20 590.0 21 685.5 22 813.0 23 1019.0 24 1236.5 25 1475.0 26 1747.5 27 2122.0 28 2632.0 29 3152.0 30 3729.0 31 4467.0 32 5253.5 33 6046.5 34 6940.0 35 7844.5 36 8598.5 37 9326.5 38 10323.5 39 11198.0 40 12010.5 41 12868.5 42 13905.0 43 15269.0 44 17027.0 45 19398.5 46 22371.0 47 26142.5 48 30575.5 49 36125.5 50 43059.5 51 50467.0 52 58555.5 53 68187.0 54 78242.5 55 88624.5 56 99786.0 57 110881.0 58 122073.0 59 134156.5 60 146512.0 61 158978.5 62 171097.0 63 182722.5 64 192791.5 65 200410.5 66 205515.5 67 206871.0 68 203607.0 69 195716.0 70 183354.5 71 166980.5 72 148053.5 73 126539.0 74 103635.0 75 81389.0 76 60719.0 77 42707.0 78 28232.0 79 17355.0 80 10141.0 81 5682.0 82 3095.5 83 1879.5 84 1227.0 85 828.5 86 590.5 87 451.0 88 348.0 89 281.0 90 221.5 91 178.0 92 150.5 93 117.0 94 91.0 95 69.0 96 54.5 97 40.5 98 26.0 99 18.0 100 12.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.12945 2 0.0844 3 0.0704 4 0.0605 5 0.0783 6 0.173675 7 0.1943 8 0.22204999999999997 9 0.1898 10-14 0.12218000000000001 15-19 0.07911 20-24 0.07383 25-29 0.065375 30-34 0.10735499999999999 35-39 0.059015 40-44 0.043785 45-49 0.040549999999999996 50-54 0.05459 55-59 0.07009 60-64 5.9999999999999995E-5 65-69 0.0 70-74 0.0 75-79 0.0060999999999999995 80-84 0.02761 85-89 1.35E-4 90-94 4.9999999999999996E-6 95-99 0.028804999999999997 100-101 0.0107875 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.21042529901885426 #Duplication Level Relative count 1 100.0 2 0.16729276233408466 3 0.004007012271475081 4 5.008765339343851E-4 5 0.0010017530678687703 6 0.0 7 0.0 8 0.0 9 5.008765339343851E-4 10++ 0.0020035061357375405 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position TTTTT 290195 3.33248 3.615858 90-94 AAAAA 292195 3.2884445 3.7166858 60-64 GATCG 1284760 3.0845976 4.08942 1 CGATC 1274295 3.0726016 3.538312 1 >>END_MODULE