##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002002_Airport_GTGGCC_L003_R1_012.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 62 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.69176575 34.0 31.0 34.0 31.0 34.0 2 32.93666975 34.0 31.0 34.0 31.0 34.0 3 32.9874105 34.0 31.0 34.0 31.0 34.0 4 36.4035965 37.0 37.0 37.0 35.0 37.0 5 36.324309 37.0 37.0 37.0 35.0 37.0 6 36.29558175 37.0 37.0 37.0 35.0 37.0 7 36.2896935 37.0 37.0 37.0 35.0 37.0 8 36.2707515 37.0 37.0 37.0 35.0 37.0 9 38.0594765 39.0 38.0 39.0 35.0 39.0 10-14 38.31107179999999 39.4 38.4 39.4 35.4 39.4 15-19 39.423237549999996 41.0 39.4 41.0 36.4 41.0 20-24 38.9285155 40.4 38.4 41.0 35.2 41.0 25-29 35.7822102 39.4 32.4 41.0 24.4 41.0 30-34 37.020790500000004 39.0 35.8 41.0 31.4 41.0 35-39 36.14102749999999 37.8 35.0 40.0 30.2 41.0 40-44 32.7467337 35.6 31.2 39.4 18.6 41.0 45-49 33.41976485 35.0 32.2 37.6 25.6 40.6 50-54 31.5899332 35.0 29.4 35.6 20.4 38.6 55-59 32.77642955 35.0 32.6 35.0 26.2 37.0 60-64 32.148996249999996 35.0 32.8 35.0 24.0 35.8 65-69 32.483212599999995 35.0 33.0 35.0 26.4 35.0 70-74 31.934280100000002 35.0 33.0 35.0 25.2 35.0 75-79 31.393621500000002 34.4 32.2 35.0 24.4 35.0 80-84 30.807766550000004 34.6 31.6 35.0 20.6 35.0 85-89 31.077068750000002 35.0 31.8 35.0 23.8 35.0 90-94 30.76744855 35.0 31.6 35.0 21.6 35.0 95-99 30.0921424 34.0 31.0 35.0 13.2 35.0 100-101 28.504358500000002 33.5 29.0 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 78.0 3 22.0 4 60.0 5 177.0 6 580.0 7 1746.0 8 4699.0 9 6403.0 10 7343.0 11 9229.0 12 9923.0 13 9372.0 14 8759.0 15 8820.0 16 9171.0 17 9705.0 18 10934.0 19 12223.0 20 13402.0 21 15629.0 22 18655.0 23 23022.0 24 29011.0 25 35932.0 26 44573.0 27 54811.0 28 68338.0 29 86435.0 30 110612.0 31 148518.0 32 219452.0 33 359044.0 34 551129.0 35 759318.0 36 909456.0 37 369676.0 38 66776.0 39 6955.0 40 12.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 34.62175049653873 19.09553945207726 17.995028612231753 28.28768143915225 2 31.44235 22.4375 20.471525 25.648625000000003 3 29.151899999999998 20.573900000000002 21.01055 29.263650000000002 4 31.21205 19.466649999999998 19.51795 29.803350000000002 5 31.45155 19.167625 19.349775 30.031049999999997 6 30.8052 18.581925 18.089875 32.523 7 32.621775 18.52345 18.4525 30.402275 8 30.3282 19.046725000000002 19.1989 31.426175 9 30.886049999999997 18.0946 19.0196 31.99975 10-14 31.089865 18.907484999999998 18.951195000000002 31.051455 15-19 31.164144999999998 18.647074999999997 18.78649 31.40229 20-24 31.175333805340887 18.701544224707593 18.77161034576553 31.351511624185985 25-29 33.437365372887875 18.196912443214394 18.10232498131629 30.263397202581437 30-34 31.863258059235477 18.58317533657612 18.4976829810576 31.055883623130804 35-39 31.526099295972866 18.656404030316796 18.644086106041573 31.173410567668764 40-44 31.65567470095888 18.64498042316797 18.69285125162087 31.006493624252286 45-49 31.77448 18.7618 18.434355 31.029365 50-54 31.975133059322914 18.908114041162364 18.499208439155616 30.61754446035911 55-59 31.423472802332626 18.68746089020457 18.628595257399017 31.26047105006379 60-64 31.569607611600937 18.64492829514299 18.533356619944403 31.252107473311675 65-69 31.350112997429992 18.63920488216911 18.65417785430408 31.35650426609682 70-74 31.567954999999998 18.697795 18.582105 31.152144999999997 75-79 31.609605000000002 18.558545000000002 18.479775 31.352075000000003 80-84 31.466743028724625 18.578835699622104 18.6135266345428 31.340894637110473 85-89 31.49437855161532 18.63558760872417 18.576266809372648 31.29376703028786 90-94 31.553024212655473 18.48020070480735 18.516538817290957 31.450236265246218 95-99 31.458268092291863 18.560089818007434 18.589175468071712 31.392466621628994 100-101 31.8332875 18.5776625 18.432312500000002 31.1567375 >>END_MODULE >>Per base GC content warn #Base %GC 1 62.90943193569098 2 57.090975 3 58.41555 4 61.0154 5 61.4826 6 63.3282 7 63.024049999999995 8 61.754374999999996 9 62.8858 10-14 62.14132 15-19 62.566435 20-24 62.526845429526865 25-29 63.70076257546932 30-34 62.91914168236629 35-39 62.69950986364164 40-44 62.66216832521116 45-49 62.803845 50-54 62.59267751968201 55-59 62.68394385239642 60-64 62.82171508491261 65-69 62.70661726352681 70-74 62.7201 75-79 62.96168 80-84 62.807637665835095 85-89 62.78814558190319 90-94 63.00326047790169 95-99 62.85073471392085 100-101 62.990025 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 4.0 1 4.5 2 5.0 3 3.5 4 4.5 5 6.5 6 10.5 7 15.0 8 13.0 9 17.5 10 35.0 11 42.0 12 48.5 13 70.5 14 89.5 15 115.5 16 155.5 17 187.0 18 223.5 19 296.0 20 385.5 21 478.0 22 612.5 23 811.5 24 1026.0 25 1275.0 26 1554.5 27 1936.0 28 2406.0 29 2901.5 30 3515.5 31 4201.5 32 4965.0 33 5800.0 34 6696.0 35 7577.0 36 8414.0 37 9265.0 38 10219.5 39 11175.0 40 12125.0 41 13080.5 42 14270.0 43 15713.0 44 17389.0 45 19605.0 46 22670.5 47 26438.5 48 31012.5 49 36792.5 50 43617.5 51 51373.5 52 60086.0 53 69771.0 54 80130.5 55 90808.0 56 101718.0 57 113130.0 58 124743.0 59 136547.5 60 148795.5 61 161575.5 62 173850.5 63 184947.0 64 194350.5 65 201616.0 66 206426.5 67 207200.0 68 202840.0 69 194528.5 70 181678.5 71 164456.5 72 144366.0 73 122312.5 74 99570.5 75 77380.0 76 57508.5 77 40517.0 78 26821.5 79 16542.5 80 9814.5 81 5741.0 82 3305.0 83 1979.0 84 1299.0 85 892.5 86 621.0 87 421.5 88 292.5 89 237.5 90 179.0 91 124.5 92 86.0 93 60.0 94 35.0 95 24.0 96 14.0 97 5.0 98 1.5 99 1.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0078 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-14 0.0 15-19 0.0 20-24 0.0015999999999999999 25-29 0.013175000000000001 30-34 0.06124 35-39 0.02374 40-44 3.50073 45-49 0.0 50-54 0.00137 55-59 0.001075 60-64 0.028390000000000002 65-69 0.01985 70-74 0.0 75-79 0.0 80-84 0.002695 85-89 0.018205 90-94 0.022325 95-99 0.002235 100-101 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.06498472858878085 #Duplication Level Relative count 1 100.0 2 0.037015361374970614 3 0.002000830344593006 4 5.002075861482515E-4 5 5.002075861482515E-4 6 0.0 7 0.0 8 0.0 9 0.0 10++ 0.0015006227584447546 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position TTTTT 282505 3.267593 3.8449273 90-94 AAAAA 279790 3.188423 3.6353288 85-89 GATCG 1255735 3.020903 4.435845 1 CGATC 1229140 3.0100162 3.6081567 1 >>END_MODULE