##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002002_Airport_GTGGCC_L003_R1_011.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 62 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.5945765 34.0 31.0 34.0 31.0 34.0 2 32.84738025 34.0 31.0 34.0 31.0 34.0 3 32.905681 34.0 31.0 34.0 31.0 34.0 4 36.359739 37.0 37.0 37.0 35.0 37.0 5 36.2759455 37.0 37.0 37.0 35.0 37.0 6 36.23797475 37.0 37.0 37.0 35.0 37.0 7 36.21482825 37.0 37.0 37.0 35.0 37.0 8 36.21047575 37.0 37.0 37.0 35.0 37.0 9 37.96123275 39.0 38.0 39.0 35.0 39.0 10-14 38.23081900000001 39.4 38.2 39.4 35.2 39.4 15-19 39.31951365 41.0 39.0 41.0 36.0 41.0 20-24 38.748882449999996 40.0 38.8 41.0 34.6 41.0 25-29 27.176576950000005 27.6 25.2 30.6 21.8 31.4 30-34 31.9166472 35.8 27.0 38.6 17.2 39.8 35-39 35.4104792 37.0 34.2 40.0 28.6 41.0 40-44 35.01724185 35.4 34.2 39.2 29.2 41.0 45-49 34.93037065 35.0 35.0 38.0 31.0 40.6 50-54 34.04095905 35.0 33.8 35.8 30.0 39.4 55-59 33.48072155 35.0 33.4 35.0 29.6 37.4 60-64 31.7632696 35.0 32.0 35.0 23.0 35.2 65-69 32.33287285 35.0 32.8 35.0 26.2 35.0 70-74 30.490272300000004 34.4 29.2 35.0 19.8 35.0 75-79 31.7355685 34.4 32.4 35.0 26.0 35.0 80-84 31.4369681 35.0 32.4 35.0 23.8 35.0 85-89 30.5682525 34.6 30.8 35.0 19.2 35.0 90-94 30.708599549999995 34.0 30.8 35.0 22.4 35.0 95-99 30.402137800000002 34.0 31.0 35.0 19.0 35.0 100-101 28.87420775 33.5 29.0 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 71.0 3 25.0 4 77.0 5 210.0 6 677.0 7 2614.0 8 7436.0 9 7715.0 10 5602.0 11 5794.0 12 5544.0 13 6273.0 14 7292.0 15 8566.0 16 9558.0 17 10580.0 18 11029.0 19 11768.0 20 12897.0 21 15059.0 22 18178.0 23 23440.0 24 30067.0 25 38501.0 26 48445.0 27 61007.0 28 76390.0 29 97123.0 30 127302.0 31 177684.0 32 276388.0 33 460747.0 34 722872.0 35 999396.0 36 574539.0 37 121396.0 38 17367.0 39 371.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.59578332169923 19.18714135132919 18.110045262987356 28.107030063984222 2 31.399749999999997 22.437025 20.522025 25.641199999999998 3 29.092975 20.601074999999998 21.01885 29.2871 4 31.216699999999996 19.504099999999998 19.585325 29.693875 5 31.382949999999997 19.168025 19.3535 30.095525000000002 6 30.8597 18.574450000000002 18.04695 32.5189 7 32.5979 18.53215 18.439075 30.430875 8 30.32375 19.0392 19.204250000000002 31.4328 9 30.92575 18.081575 18.96705 32.025625000000005 10-14 31.10142 18.8914 18.931865000000002 31.075314999999996 15-19 31.187555 18.63215 18.768045 31.412250000000004 20-24 31.392989792908633 18.67972371417344 18.741949576001627 31.185336916916302 25-29 41.27887218107179 16.382351388798906 15.921101903787289 26.417674526342015 30-34 32.80121886772813 18.67988357801434 18.09531649725159 30.42358105700594 35-39 31.423923047680024 18.690159867144203 18.66874087116589 31.217176214009886 40-44 31.528986691738865 18.547050442724483 18.62590024862015 31.2980626169165 45-49 31.405925 18.559825 18.59188 31.442369999999997 50-54 31.29391832566452 18.645075527419916 18.66924598182446 31.391760165091103 55-59 31.360201882876833 18.687186292404668 18.662145935579584 31.29046588913892 60-64 31.583927268005873 18.475245300329668 18.440524991870085 31.500302439794375 65-69 31.32612503674989 18.649006580118158 18.685003714752245 31.339864668379715 70-74 31.601995 18.890835 18.583215 30.923954999999996 75-79 31.446714999999998 18.5594 18.558585 31.435299999999998 80-84 31.397937831328264 18.70829872159623 18.68210772240961 31.2116557246659 85-89 31.554632928134158 18.94121902403646 18.611409503136898 30.892738544692484 90-94 31.501319642901088 18.527092045667587 18.54336874190042 31.428219569530906 95-99 31.405618489846038 18.603049256751355 18.63443514968001 31.356897103722602 100-101 31.696550000000002 18.651162499999998 18.5147375 31.137550000000005 >>END_MODULE >>Per base GC content warn #Base %GC 1 62.702813385683456 2 57.04095 3 58.380075 4 60.910575 5 61.478474999999996 6 63.3786 7 63.028775 8 61.75655 9 62.951375 10-14 62.17673500000001 15-19 62.599804999999996 20-24 62.57832670982493 25-29 67.6965467074138 30-34 63.224799924734064 35-39 62.64109926168992 40-44 62.82704930865536 45-49 62.848295 50-54 62.68567849075563 55-59 62.65066777201576 60-64 63.08422970780024 65-69 62.6659897051296 70-74 62.525949999999995 75-79 62.882015 80-84 62.60959355599416 85-89 62.44737147282664 90-94 62.929539212432 95-99 62.76251559356864 100-101 62.83410000000001 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2.0 1 3.5 2 5.0 3 6.5 4 8.5 5 10.5 6 9.5 7 8.0 8 13.0 9 18.5 10 20.5 11 29.5 12 39.0 13 54.0 14 85.0 15 106.5 16 134.5 17 174.0 18 231.0 19 287.5 20 344.0 21 417.5 22 515.0 23 665.5 24 845.5 25 1077.5 26 1354.0 27 1676.5 28 2082.0 29 2586.5 30 3163.5 31 3800.5 32 4509.0 33 5350.5 34 6209.0 35 7068.0 36 7978.5 37 8888.5 38 9809.5 39 10637.5 40 11587.5 41 12640.0 42 13663.0 43 14976.5 44 16769.0 45 18901.0 46 21401.5 47 24836.0 48 29299.5 49 34684.0 50 41050.5 51 48434.5 52 56996.5 53 66346.0 54 76551.5 55 87531.5 56 98344.5 57 109615.0 58 121856.5 59 133960.5 60 145996.0 61 158465.5 62 171399.0 63 183421.0 64 193093.0 65 201639.0 66 207389.0 67 209112.0 68 206443.5 69 198934.5 70 187267.0 71 171686.0 72 152093.0 73 129270.5 74 105911.5 75 83288.0 76 62249.5 77 43712.0 78 28632.0 79 17649.5 80 10188.5 81 5469.5 82 2908.5 83 1560.5 84 887.0 85 545.5 86 340.5 87 231.5 88 171.0 89 117.5 90 97.0 91 71.0 92 38.0 93 22.5 94 12.0 95 8.0 96 5.0 97 3.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.006600000000000001 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-14 0.0 15-19 0.0 20-24 0.001385 25-29 0.058425000000000005 30-34 0.08760000000000001 35-39 0.042 40-44 0.006095 45-49 0.0 50-54 0.00188 55-59 0.001425 60-64 0.02969 65-69 0.033710000000000004 70-74 0.0 75-79 0.0 80-84 0.003815 85-89 0.015014999999999999 90-94 0.04114 95-99 0.002845 100-101 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.03249837508123601 #Duplication Level Relative count 1 100.0 2 0.025006876891145065 3 0.0010002750756458027 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10++ 0.0015004126134687038 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position TTTTT 272925 3.2152658 3.8058922 95-97 AAAAA 270445 3.1152203 3.6991582 70-74 >>END_MODULE