##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002002_Airport_GTGGCC_L003_R1_010.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 62 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.75363975 34.0 31.0 34.0 31.0 34.0 2 32.985616 34.0 31.0 34.0 31.0 34.0 3 33.0289225 34.0 31.0 34.0 31.0 34.0 4 36.447593 37.0 37.0 37.0 35.0 37.0 5 36.38581375 37.0 37.0 37.0 35.0 37.0 6 36.35455275 37.0 37.0 37.0 35.0 37.0 7 36.3458415 37.0 37.0 37.0 35.0 37.0 8 36.334772 37.0 37.0 37.0 35.0 37.0 9 38.112868 39.0 39.0 39.0 37.0 39.0 10-14 38.2990317 39.4 38.6 39.4 36.2 39.4 15-19 39.508820300000004 41.0 39.8 41.0 37.0 41.0 20-24 38.62248565 40.4 38.6 41.0 34.2 41.0 25-29 25.573631499999998 26.6 23.0 29.2 19.2 31.4 30-34 32.3128237 36.6 30.2 38.8 15.2 39.8 35-39 34.15445585 36.6 32.0 39.8 23.8 41.0 40-44 33.244592350000005 35.0 32.0 38.8 21.6 40.6 45-49 32.76381590000001 35.0 32.2 37.4 21.2 40.0 50-54 32.6296229 35.0 32.4 35.6 23.4 39.0 55-59 32.557420650000005 35.0 32.8 35.0 24.8 37.2 60-64 32.685861949999996 35.0 33.0 35.0 26.8 35.6 65-69 31.989532149999995 35.0 32.6 35.0 24.6 35.0 70-74 31.16817545 35.0 31.8 35.0 21.8 35.0 75-79 30.7582571 34.4 31.0 35.0 21.4 35.0 80-84 30.649142800000003 34.8 31.0 35.0 19.4 35.0 85-89 30.747569199999997 35.0 31.4 35.0 20.6 35.0 90-94 30.5131862 34.8 31.0 35.0 19.4 35.0 95-99 29.7748287 34.0 31.0 35.0 9.2 35.0 100-101 28.110694 33.5 28.5 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 76.0 3 23.0 4 72.0 5 207.0 6 749.0 7 2952.0 8 8723.0 9 10422.0 10 8898.0 11 8960.0 12 7825.0 13 8371.0 14 8830.0 15 9679.0 16 10554.0 17 11505.0 18 12982.0 19 14266.0 20 15792.0 21 18046.0 22 21561.0 23 26734.0 24 33513.0 25 41832.0 26 52008.0 27 64653.0 28 82853.0 29 107195.0 30 145236.0 31 212794.0 32 340696.0 33 547930.0 34 822830.0 35 871654.0 36 387324.0 37 73330.0 38 8795.0 39 130.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.64595 19.0918 17.929175 28.333075 2 31.502924999999998 22.38645 20.41385 25.696775 3 29.231025 20.512925000000003 20.92275 29.3333 4 31.319425000000003 19.3824 19.493550000000003 29.804625 5 31.4849 19.16 19.352725 30.002374999999997 6 30.8242 18.5669 18.06435 32.54455 7 32.633475000000004 18.51755 18.444875 30.4041 8 30.271525 19.075025 19.194275 31.459175000000002 9 30.928575000000002 18.0632 18.984 32.024225 10-14 31.1998 18.89758 18.895755 31.006865 15-19 31.18483 18.634815 18.79479 31.385565 20-24 31.66251667965772 18.543359309940303 18.678481600263126 31.11564241013885 25-29 39.40264860481033 16.883352573444903 16.420569326455436 27.293429495289335 30-34 33.53544559261998 18.643744862300263 17.960009458997874 29.860800086081884 35-39 32.13947482436774 18.63124433978808 18.485870740542037 30.74341009530214 40-44 32.08743565910977 18.75222661493678 18.366162523127418 30.794175202826025 45-49 32.11951 18.912770000000002 18.342665 30.625055 50-54 31.79759 18.95446 18.464344999999998 30.783605 55-59 31.542975971695935 18.73180714656608 18.59973184939666 31.12548503234132 60-64 31.500903368552507 18.57756831763758 18.556699226017813 31.364829087792096 65-69 31.48655503297086 18.77178923061993 18.619405934254377 31.12224980215484 70-74 31.644379999999998 18.789195 18.58466 30.981765 75-79 31.823420000000002 18.610004999999997 18.434044999999998 31.132530000000003 80-84 31.570055438687056 18.782540971241314 18.602278859901023 31.045124730170603 85-89 31.581279484921275 18.65585517461775 18.55919289396206 31.20367244649892 90-94 31.583575596884923 18.496600772114693 18.494469406548774 31.425354224451606 95-99 31.553217640155378 18.530937413950515 18.553803107924324 31.362041837969784 100-101 31.925124999999998 18.563175 18.4327 31.079 >>END_MODULE >>Per base GC content warn #Base %GC 1 62.979025 2 57.1997 3 58.564325 4 61.12405 5 61.487275 6 63.36875 7 63.037575000000004 8 61.730700000000006 9 62.952799999999996 10-14 62.20666500000001 15-19 62.570395 20-24 62.77815908979657 25-29 66.69607810009967 30-34 63.39624567870187 35-39 62.88288491966988 40-44 62.8816108619358 45-49 62.744564999999994 50-54 62.581195 55-59 62.668461004037255 60-64 62.8657324563446 65-69 62.608804835125696 70-74 62.626145 75-79 62.95595 80-84 62.61518016885766 85-89 62.784951931420196 90-94 63.00892982133654 95-99 62.915259478125165 100-101 63.004125 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1.0 1 1.0 2 4.0 3 7.0 4 7.0 5 7.5 6 10.0 7 13.0 8 15.0 9 21.0 10 27.5 11 30.5 12 48.0 13 66.0 14 76.0 15 94.5 16 119.5 17 168.5 18 224.0 19 277.0 20 334.5 21 404.5 22 540.0 23 710.0 24 855.5 25 1028.0 26 1308.0 27 1650.0 28 2108.0 29 2654.5 30 3248.5 31 3863.0 32 4553.5 33 5414.0 34 6223.5 35 7082.0 36 8138.0 37 9059.0 38 9889.0 39 10828.5 40 11770.5 41 12670.0 42 13826.5 43 15256.5 44 16998.0 45 19294.5 46 22096.0 47 25694.0 48 30194.5 49 35655.0 50 42102.5 51 49553.5 52 58162.5 53 68047.0 54 78571.5 55 89482.5 56 101095.0 57 112713.5 58 124513.0 59 136957.0 60 149729.0 61 162724.5 62 174855.0 63 186138.0 64 196608.0 65 204196.5 66 208487.5 67 208948.0 68 204519.0 69 195882.5 70 182677.5 71 165182.5 72 144901.0 73 122642.0 74 100007.0 75 78268.5 76 57914.5 77 40499.5 78 27000.0 79 16883.0 80 10094.0 81 5977.0 82 3533.0 83 2165.0 84 1372.5 85 915.0 86 645.5 87 459.5 88 316.5 89 237.5 90 170.5 91 111.5 92 71.5 93 49.0 94 26.0 95 12.0 96 8.0 97 4.5 98 3.5 99 1.0 100 0.5 >>END_MODULE >>Per base N content warn #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-14 0.0 15-19 0.0 20-24 0.001695 25-29 5.444935 30-34 0.095125 35-39 0.03687 40-44 0.002355 45-49 0.0 50-54 0.0 55-59 2.25E-4 60-64 0.043565 65-69 0.0481 70-74 0.0 75-79 0.0 80-84 0.003945 85-89 0.023049999999999998 90-94 0.06407 95-99 0.003035 100-101 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.01899943001710344 #Duplication Level Relative count 1 100.0 2 0.013002080332853256 3 0.0010001600256040967 4 0.0 5 0.0 6 5.000800128020483E-4 7 0.0 8 0.0 9 0.0 10++ 0.001500240038406145 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position TTTTT 270290 3.2638617 4.2052197 90-94 AAAAA 272145 3.127498 3.636813 1 >>END_MODULE