##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002002_Airport_GTGGCC_L003_R1_008.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 62 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.76227025 34.0 31.0 34.0 31.0 34.0 2 32.98606925 34.0 31.0 34.0 31.0 34.0 3 33.03254975 34.0 31.0 34.0 31.0 34.0 4 36.433333 37.0 37.0 37.0 35.0 37.0 5 36.3770695 37.0 37.0 37.0 35.0 37.0 6 36.3372265 37.0 37.0 37.0 35.0 37.0 7 36.339727 37.0 37.0 37.0 35.0 37.0 8 36.32267225 37.0 37.0 37.0 35.0 37.0 9 38.12447975 39.0 39.0 39.0 37.0 39.0 10-14 38.389295499999996 39.4 38.8 39.4 37.0 39.4 15-19 39.5632497 41.0 40.0 41.0 37.0 41.0 20-24 39.30450355000001 41.0 39.0 41.0 36.0 41.0 25-29 38.84423265 40.0 38.4 41.0 35.0 41.0 30-34 37.976266249999995 40.0 37.0 41.0 33.4 41.0 35-39 37.00057475 38.6 35.0 40.6 32.6 41.0 40-44 36.02146305 36.6 35.0 40.0 31.8 41.0 45-49 35.3524515 35.0 35.0 38.4 31.8 41.0 50-54 34.5375387 35.0 35.0 36.2 31.0 39.6 55-59 33.83174095 35.0 34.0 35.0 30.4 38.0 60-64 33.38420225 35.0 34.0 35.0 29.8 36.2 65-69 33.04612115 35.0 33.2 35.0 29.0 35.0 70-74 32.7562152 35.0 33.0 35.0 29.0 35.0 75-79 32.18915805 34.6 32.6 35.0 27.0 35.0 80-84 32.304938050000004 35.0 33.0 35.0 27.0 35.0 85-89 31.815975650000002 35.0 33.0 35.0 25.8 35.0 90-94 31.52159445 35.0 33.0 35.0 24.2 35.0 95-99 31.049699200000003 35.0 32.8 35.0 23.0 35.0 100-101 29.840711624999997 34.0 30.5 35.0 17.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 81.0 3 19.0 4 49.0 5 139.0 6 365.0 7 979.0 8 2199.0 9 3690.0 10 4809.0 11 5394.0 12 5654.0 13 5844.0 14 6370.0 15 6334.0 16 7164.0 17 7796.0 18 8554.0 19 8940.0 20 9960.0 21 11323.0 22 12974.0 23 16091.0 24 19667.0 25 24421.0 26 30854.0 27 37899.0 28 46965.0 29 58060.0 30 72942.0 31 93579.0 32 122108.0 33 171487.0 34 283558.0 35 690815.0 36 1404636.0 37 679745.0 38 123825.0 39 14659.0 40 52.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 34.631990691827795 19.0895531567334 17.911306359167646 28.367149792271157 2 31.524724999999997 22.36385 20.445275 25.66615 3 29.21985 20.49405 20.991 29.2951 4 31.295809289849597 19.373574797787228 19.472802997896682 29.857812914466493 5 31.480775 19.209975 19.3204 29.98885 6 30.820575 18.5019 18.129575 32.54795 7 32.66755 18.462275 18.4402 30.429975 8 30.314375 19.012999999999998 19.229825 31.4428 9 30.877100000000002 18.06365 19.01855 32.0407 10-14 31.100889999999996 18.878600000000002 18.92514 31.09537 15-19 31.19336 18.623595 18.792645 31.390400000000003 20-24 31.1670760141256 18.680539329631515 18.814436224272573 31.337948431970315 25-29 31.256414999999997 18.769644999999997 18.75547 31.218469999999996 30-34 31.39066758217363 18.63503415016065 18.639706737605948 31.334591530059768 35-39 31.247757696047252 18.68146876497474 18.730818205522716 31.33995533345529 40-44 31.336345528717892 18.69538012483057 18.67586472281329 31.292409623638246 45-49 31.41393 18.572485 18.599635 31.41395 50-54 31.2633 18.641595 18.709429999999998 31.385675000000003 55-59 31.39916 18.68476 18.649820000000002 31.266260000000003 60-64 31.414408750895838 18.567816992169625 18.57758433144738 31.440189925487154 65-69 31.31355239709045 18.667204227621525 18.687767834478166 31.331475540809855 70-74 31.39651 18.7075 18.62769 31.2683 75-79 31.44772 18.54422 18.55742 31.450640000000003 80-84 31.32379239266442 18.63435963654591 18.668845024506524 31.373002946283147 85-89 31.43524402290871 18.72616572120506 18.637977201905052 31.200613053981176 90-94 31.489663514174115 18.51953418719078 18.550253209367593 31.440549089267517 95-99 31.406306211485564 18.57536110977082 18.648826826061555 31.36950585268206 100-101 31.652587500000003 18.658725 18.554750000000002 31.1339375 >>END_MODULE >>Per base GC content warn #Base %GC 1 62.99914048409896 2 57.190875 3 58.51495 4 61.15362220431609 5 61.46962500000001 6 63.368525 7 63.097525 8 61.757175 9 62.9178 10-14 62.19626 15-19 62.58376 20-24 62.505024446095916 25-29 62.474885 30-34 62.7252591122334 35-39 62.587713029502545 40-44 62.62875515235614 45-49 62.82788 50-54 62.64897499999999 55-59 62.665420000000005 60-64 62.85459867638299 65-69 62.64502793790031 70-74 62.66481 75-79 62.89836 80-84 62.69679533894757 85-89 62.63585707688989 90-94 62.930212603441625 95-99 62.775812064167624 100-101 62.786525000000005 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 8.0 1 7.0 2 5.5 3 7.0 4 8.0 5 8.5 6 14.5 7 19.5 8 22.5 9 29.5 10 38.0 11 55.0 12 68.0 13 77.0 14 96.5 15 125.0 16 165.5 17 211.5 18 264.5 19 332.5 20 414.5 21 541.0 22 683.5 23 839.0 24 1053.0 25 1299.0 26 1628.5 27 1998.5 28 2465.0 29 3086.0 30 3686.5 31 4379.0 32 5181.5 33 5937.5 34 6823.5 35 7798.0 36 8704.5 37 9696.5 38 10517.5 39 11259.5 40 12114.0 41 13050.0 42 14136.0 43 15566.0 44 17480.5 45 19707.5 46 22555.0 47 26375.0 48 31153.5 49 36713.0 50 43545.0 51 51376.0 52 59959.5 53 69397.0 54 79439.5 55 90195.0 56 101084.5 57 112062.5 58 123882.0 59 135919.5 60 147505.5 61 159345.0 62 171510.5 63 183132.5 64 193499.0 65 200941.0 66 205179.0 67 206304.0 68 202966.0 69 195176.5 70 182896.5 71 166453.5 72 146445.5 73 124711.5 74 102219.5 75 79778.0 76 59279.0 77 41677.5 78 27228.0 79 16397.5 80 9449.5 81 5153.5 82 2764.0 83 1584.0 84 945.0 85 607.5 86 446.0 87 334.5 88 229.5 89 170.0 90 140.5 91 103.0 92 61.5 93 38.0 94 29.5 95 17.5 96 8.0 97 5.0 98 2.5 99 1.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0018499999999999999 2 0.0 3 0.0 4 0.0032249999999999996 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-14 0.0 15-19 0.0 20-24 0.001415 25-29 0.0 30-34 0.055375 35-39 0.019129999999999998 40-44 0.0020599999999999998 45-49 0.0 50-54 0.0 55-59 0.0 60-64 0.02395 65-69 0.01754 70-74 0.0 75-79 0.0 80-84 0.0011250000000000001 85-89 0.015330000000000002 90-94 0.029369999999999997 95-99 9.75E-4 100-101 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.18396688596053282 #Duplication Level Relative count 1 100.0 2 0.15926437886892242 3 0.002003325520363804 4 5.00831380090951E-4 5 0.0015024941402728528 6 0.0 7 0.002003325520363804 8 0.0 9 0.0 10++ 0.001001662760181902 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position TTTTT 302720 3.3961148 4.0007825 90-94 AAAAA 296110 3.314495 3.7571404 70-74 GATCG 1277470 3.0632086 4.358232 1 CGATC 1268320 3.055352 3.508105 1 >>END_MODULE