##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002002_Airport_GTGGCC_L003_R1_007.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 62 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.7214295 34.0 31.0 34.0 31.0 34.0 2 32.95189375 34.0 31.0 34.0 31.0 34.0 3 32.99568175 34.0 31.0 34.0 31.0 34.0 4 36.4088315 37.0 37.0 37.0 35.0 37.0 5 36.33859425 37.0 37.0 37.0 35.0 37.0 6 36.299389 37.0 37.0 37.0 35.0 37.0 7 36.29339175 37.0 37.0 37.0 35.0 37.0 8 36.27042125 37.0 37.0 37.0 35.0 37.0 9 38.04738975 39.0 38.0 39.0 35.0 39.0 10-14 38.31790910000001 39.4 38.4 39.4 35.4 39.4 15-19 39.4240323 41.0 39.2 41.0 36.4 41.0 20-24 39.15983965 40.4 39.0 41.0 35.6 41.0 25-29 38.70973005 40.0 38.0 41.0 34.8 41.0 30-34 37.90670165 39.8 36.8 41.0 33.2 41.0 35-39 36.84167334999999 38.4 35.0 40.4 32.0 41.0 40-44 35.8131561 36.2 35.0 39.6 31.0 41.0 45-49 35.2328701 35.0 35.0 38.4 31.0 41.0 50-54 34.36020905 35.0 34.4 36.2 30.6 39.6 55-59 33.752583349999995 35.0 34.0 35.0 30.0 38.0 60-64 33.275061949999994 35.0 33.2 35.0 29.4 36.0 65-69 32.89054125 35.0 33.0 35.0 29.0 35.0 70-74 32.586603649999994 35.0 33.0 35.0 27.6 35.0 75-79 31.94106445 34.4 32.4 35.0 26.4 35.0 80-84 32.1899019 35.0 33.0 35.0 27.0 35.0 85-89 31.864658650000003 35.0 33.0 35.0 26.4 35.0 90-94 31.42773755 35.0 33.0 35.0 24.2 35.0 95-99 30.8336279 35.0 32.0 35.0 22.6 35.0 100-101 29.425817625 33.5 29.5 35.0 10.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 63.0 3 13.0 4 48.0 5 141.0 6 425.0 7 1063.0 8 2342.0 9 3865.0 10 4978.0 11 5754.0 12 5751.0 13 5990.0 14 6098.0 15 6608.0 16 7351.0 17 8042.0 18 8747.0 19 9406.0 20 10046.0 21 11630.0 22 13631.0 23 16597.0 24 20950.0 25 26384.0 26 33025.0 27 40837.0 28 51231.0 29 62868.0 30 79312.0 31 100337.0 32 131047.0 33 182379.0 34 298353.0 35 720224.0 36 1379904.0 37 621580.0 38 110733.0 39 12217.0 40 30.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 34.65298954162995 19.091876035760684 18.024311184765203 28.230823237844156 2 31.41405 22.415850000000002 20.50545 25.66465 3 29.14155 20.556675 20.986075 29.3157 4 31.263875000000002 19.442725 19.51855 29.774850000000004 5 31.380724999999998 19.198475000000002 19.381375000000002 30.039424999999998 6 30.829800000000002 18.551075 18.061025 32.5581 7 32.66965 18.505775 18.434075 30.3905 8 30.304175 19.053025 19.215975 31.426825 9 30.880675000000004 18.069875 19.03415 32.0153 10-14 31.09068 18.89014 18.938395 31.080785 15-19 31.182885 18.616015 18.77877 31.42233 20-24 31.137404425951697 18.684487688700557 18.819944883107105 31.358163002240637 25-29 31.252112502535002 18.77675253210304 18.746732496078998 31.224402469282964 30-34 31.340625415781748 18.611856669964578 18.6440888214857 31.403429092767976 35-39 31.23858752886559 18.68288406859534 18.74067525225199 31.33785315028708 40-44 31.33989475019484 18.712663151873112 18.664392782604786 31.28304931532726 45-49 31.384055 18.567800000000002 18.602745000000002 31.4454 50-54 31.292116564605827 18.66204093310205 18.672195933609796 31.37364656868233 55-59 31.376624615586767 18.665950465305883 18.666250465875887 31.291174453231463 60-64 31.406213427918118 18.5516505324395 18.570565488157897 31.47157055148449 65-69 31.304358088837684 18.656294698818293 18.670402284738792 31.36894492760523 70-74 31.400355 18.685835 18.615305 31.298505 75-79 31.443320000000003 18.543975 18.558245 31.45446 80-84 31.3194465000444 18.621352221207978 18.679733482243215 31.379467796504407 85-89 31.416007957964936 18.674942427428356 18.625157637249366 31.28389197735735 90-94 31.486645609162235 18.53150413518094 18.539991353739868 31.441858901916962 95-99 31.421861072996016 18.574168801150996 18.613225039233743 31.390745086619248 100-101 31.68847058564704 18.643056983691626 18.540506188922965 31.127966241738374 >>END_MODULE >>Per base GC content warn #Base %GC 1 62.88381277947411 2 57.078700000000005 3 58.45725 4 61.03872500000001 5 61.42014999999999 6 63.387899999999995 7 63.06015000000001 8 61.731 9 62.89597500000001 10-14 62.171465000000005 15-19 62.605215 20-24 62.49556742819233 25-29 62.47651497181796 30-34 62.744054508549716 35-39 62.57644067915267 40-44 62.6229440655221 45-49 62.829455 50-54 62.66576313328815 55-59 62.66779906881823 60-64 62.8777839794026 65-69 62.673303016442915 70-74 62.69886 75-79 62.897780000000004 80-84 62.6989142965488 85-89 62.69989993532228 90-94 62.9285045110792 95-99 62.81260615961526 100-101 62.81643682738542 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 9.0 1 9.5 2 6.5 3 6.5 4 10.0 5 8.0 6 8.5 7 17.5 8 22.5 9 26.0 10 37.0 11 52.0 12 69.0 13 83.0 14 110.0 15 138.5 16 163.0 17 207.0 18 276.5 19 351.0 20 425.5 21 515.0 22 661.0 23 853.0 24 1071.0 25 1336.5 26 1607.0 27 2010.0 28 2474.0 29 2978.5 30 3684.5 31 4348.0 32 5053.5 33 5872.0 34 6844.0 35 7821.0 36 8560.5 37 9436.5 38 10381.5 39 11201.5 40 12114.5 41 13143.0 42 14246.5 43 15670.0 44 17368.5 45 19558.5 46 22497.5 47 26346.5 48 31322.5 49 36993.5 50 43616.5 51 51568.5 52 60463.0 53 69769.5 54 79627.0 55 89947.5 56 101005.0 57 112348.0 58 123651.5 59 135169.0 60 146893.0 61 159379.5 62 172264.0 63 183054.0 64 192755.0 65 201005.0 66 205293.5 67 206292.5 68 202521.5 69 194504.0 70 182541.0 71 166427.5 72 146935.5 73 124850.5 74 102295.0 75 80366.5 76 59664.5 77 41565.5 78 27142.0 79 16698.0 80 9655.0 81 5246.0 82 2835.5 83 1575.5 84 939.5 85 630.0 86 431.5 87 297.0 88 226.5 89 173.0 90 127.5 91 90.0 92 54.5 93 36.5 94 27.5 95 18.0 96 12.0 97 4.5 98 2.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0131 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-14 0.0 15-19 0.0 20-24 0.0016200000000000001 25-29 1.1999999999999999E-4 30-34 0.0377 35-39 0.0107 40-44 7.65E-4 45-49 0.0 50-54 4.9999999999999996E-6 55-59 1.9E-4 60-64 0.0262 65-69 0.018330000000000003 70-74 0.0 75-79 0.0 80-84 0.00216 85-89 0.019665000000000002 90-94 0.02614 95-99 0.0031699999999999996 100-101 7.750000000000001E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.1549728797460324 #Duplication Level Relative count 1 100.0 2 0.13218174990612092 3 0.002503442233070472 4 5.006884466140943E-4 5 0.0010013768932281887 6 0.0 7 0.0 8 0.0 9 5.006884466140943E-4 10++ 0.0010013768932281887 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position AAAAA 291990 3.2744238 3.9213054 1 TTTTT 287550 3.2209535 3.617382 85-89 GATCG 1275020 3.0585883 4.3022876 1 CGATC 1266865 3.0505338 3.5361433 1 >>END_MODULE