##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002002_Airport_GTGGCC_L003_R1_001.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 62 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.779812 34.0 31.0 34.0 31.0 34.0 2 33.00739075 34.0 31.0 34.0 31.0 34.0 3 33.052195 34.0 31.0 34.0 31.0 34.0 4 36.419881 37.0 37.0 37.0 35.0 37.0 5 36.36360575 37.0 37.0 37.0 35.0 37.0 6 36.322841 37.0 37.0 37.0 35.0 37.0 7 36.32722375 37.0 37.0 37.0 35.0 37.0 8 36.28974175 37.0 37.0 37.0 35.0 37.0 9 38.08701425 39.0 39.0 39.0 37.0 39.0 10-14 38.35411415 39.4 38.6 39.4 36.2 39.4 15-19 39.47194655 41.0 39.4 41.0 36.8 41.0 20-24 39.264241850000005 40.8 39.0 41.0 35.8 41.0 25-29 38.7661476 40.0 38.2 41.0 34.8 41.0 30-34 37.9517558 40.0 37.0 41.0 33.4 41.0 35-39 36.8886813 38.6 35.0 40.6 32.2 41.0 40-44 35.87276795 36.6 35.0 40.0 31.2 41.0 45-49 35.252956700000006 35.0 35.0 38.4 31.4 41.0 50-54 34.37764455 35.0 34.6 36.2 30.8 39.6 55-59 33.72039855 35.0 34.0 35.0 30.0 38.0 60-64 33.17793345 35.0 33.2 35.0 28.4 36.2 65-69 32.77287175 35.0 33.0 35.0 28.8 35.0 70-74 32.4602659 35.0 33.0 35.0 26.6 35.0 75-79 31.791898550000003 34.4 32.4 35.0 26.0 35.0 80-84 32.014078350000005 35.0 33.0 35.0 27.0 35.0 85-89 31.647165649999998 35.0 33.0 35.0 24.6 35.0 90-94 31.183234399999996 35.0 32.8 35.0 23.8 35.0 95-99 30.46735395 35.0 31.4 35.0 18.6 35.0 100-101 29.1879455 34.0 30.0 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 65.0 3 17.0 4 38.0 5 141.0 6 378.0 7 1050.0 8 2598.0 9 4041.0 10 5293.0 11 5927.0 12 6226.0 13 6409.0 14 6770.0 15 7250.0 16 8377.0 17 9360.0 18 10045.0 19 10806.0 20 11709.0 21 13143.0 22 15099.0 23 18309.0 24 22315.0 25 27657.0 26 33968.0 27 42126.0 28 52040.0 29 64053.0 30 79343.0 31 100556.0 32 132261.0 33 182860.0 34 294026.0 35 686767.0 36 1346349.0 37 655171.0 38 122523.0 39 14884.0 40 50.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 34.54797058349241 19.087778248635242 17.956145252444188 28.408105915428166 2 31.55985 22.355375 20.374325 25.71045 3 29.222074999999997 20.5317 20.944125 29.302099999999996 4 31.3045 19.375125 19.471 29.849375000000002 5 31.5243 19.180249999999997 19.3396 29.95585 6 30.820175 18.590999999999998 18.107575 32.48125 7 32.633075 18.481524999999998 18.4619 30.423499999999997 8 30.301525 19.040825 19.1922 31.46545 9 30.895475 18.105475 19.041375 31.957675000000002 10-14 31.07687 18.900595 18.943685 31.078850000000003 15-19 31.1778 18.64235 18.789825 31.390024999999998 20-24 31.1213889607235 18.68789264448907 18.834275250099452 31.356443144687972 25-29 31.25534409910708 18.774673606514206 18.75667848324761 31.213303811131105 30-34 31.346671571283903 18.61076650183778 18.661456661314205 31.381105265564113 35-39 31.24726325591703 18.691015148855126 18.740468430080337 31.321253165147507 40-44 31.35067694547386 18.71061809743267 18.66985806890065 31.26884688819282 45-49 31.408785 18.553875 18.60298 31.43436 50-54 31.28213284623949 18.654659587392565 18.689644624126856 31.37356294224109 55-59 31.387120000000003 18.68933 18.6418 31.281750000000002 60-64 31.42881250145982 18.54768789343458 18.576341556869718 31.447158048235885 65-69 31.301548031342325 18.628154197381097 18.695936332704907 31.37436143857167 70-74 31.433699999999998 18.6718 18.613 31.2815 75-79 31.452999999999996 18.55113 18.560525 31.435344999999998 80-84 31.348811636543132 18.62146008903532 18.649900829916618 31.379827444504933 85-89 31.453840541429795 18.660077584452623 18.598058633289558 31.28802324082802 90-94 31.525607647898475 18.507177620324235 18.521248100072572 31.44596663170472 95-99 31.469341625600688 18.55556497838461 18.599182787371507 31.3759106086432 100-101 31.782819088324075 18.59010833570418 18.462457505973788 31.164615069997954 >>END_MODULE >>Per base GC content pass #Base %GC 1 62.95607649892057 2 57.2703 3 58.524175 4 61.153875 5 61.48015 6 63.301425 7 63.056575 8 61.766975 9 62.85315 10-14 62.15572 15-19 62.567825 20-24 62.47783210541148 25-29 62.46864791023818 30-34 62.727776836848015 35-39 62.56851642106454 40-44 62.619523833666676 45-49 62.843145 50-54 62.65569578848058 55-59 62.66887 60-64 62.8759705496957 65-69 62.67590946991399 70-74 62.7152 75-79 62.888345 80-84 62.728639081048065 85-89 62.74186378225782 90-94 62.971574279603196 95-99 62.84525223424389 100-101 62.947434158322025 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 7.0 1 8.0 2 6.5 3 4.5 4 5.0 5 7.5 6 12.0 7 14.0 8 22.5 9 31.5 10 38.5 11 47.5 12 59.0 13 75.0 14 98.5 15 124.0 16 163.5 17 209.0 18 251.5 19 313.0 20 415.5 21 521.0 22 659.5 23 825.5 24 1047.5 25 1315.5 26 1651.0 27 2021.5 28 2438.0 29 3022.5 30 3675.0 31 4354.0 32 5137.0 33 6189.0 34 7078.0 35 7730.0 36 8568.0 37 9467.0 38 10352.0 39 11219.0 40 12077.5 41 13079.5 42 14274.5 43 15692.0 44 17354.0 45 19683.0 46 22738.0 47 26581.5 48 31331.0 49 36969.5 50 43653.5 51 51415.5 52 60225.5 53 69718.0 54 79657.0 55 90135.0 56 101183.5 57 112563.5 58 123683.0 59 134762.0 60 146894.0 61 159687.0 62 171637.0 63 182917.5 64 192836.5 65 200179.0 66 204605.5 67 205683.5 68 202849.5 69 194720.5 70 182306.0 71 165868.0 72 146006.0 73 124383.5 74 101640.5 75 79745.5 76 59729.5 77 42214.5 78 27983.0 79 17277.0 80 10156.5 81 5817.0 82 3253.0 83 1878.0 84 1179.0 85 787.5 86 549.5 87 371.0 88 265.5 89 208.0 90 143.0 91 93.0 92 65.5 93 49.5 94 28.0 95 16.0 96 11.0 97 4.0 98 1.5 99 1.5 100 0.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.005125 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-14 0.0 15-19 0.0 20-24 0.00178 25-29 6.85E-4 30-34 0.03977 35-39 0.006635 40-44 7.0E-5 45-49 0.0 50-54 1.0499999999999999E-4 55-59 0.0 60-64 0.030235 65-69 0.02528 70-74 0.0 75-79 0.0 80-84 0.002605 85-89 0.022494999999999998 90-94 0.038945 95-99 0.0064399999999999995 100-101 6.5E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.1759586497173179 #Duplication Level Relative count 1 100.0 2 0.14572222639525276 3 0.005007636645884974 4 0.001001527329176995 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10++ 0.001001527329176995 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position TTTTT 285755 3.1994185 3.5246077 10-14 AAAAA 280340 3.149049 3.453464 1 GATCG 1279925 3.0689218 4.241578 1 CGATC 1267325 3.0534117 3.38234 1 >>END_MODULE