##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002002_Airport_GTGGCC_L002_R2_014.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 800503 Filtered Sequences 0 Sequence length 101 %GC 62 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.16994189903098 33.0 31.0 34.0 30.0 34.0 2 32.34806365497693 34.0 31.0 34.0 30.0 34.0 3 32.402932905935394 34.0 31.0 34.0 30.0 34.0 4 35.83373703783746 37.0 35.0 37.0 35.0 37.0 5 35.8793920822283 37.0 35.0 37.0 35.0 37.0 6 35.85072135894556 37.0 36.0 37.0 35.0 37.0 7 35.80735237719284 37.0 36.0 37.0 35.0 37.0 8 35.82154720219662 37.0 36.0 37.0 35.0 37.0 9 37.55243390718086 39.0 38.0 39.0 35.0 39.0 10-14 37.69867196000514 39.2 38.0 39.4 35.0 39.4 15-19 38.76170932526174 40.0 38.0 41.0 35.0 41.0 20-24 38.494235499429735 40.0 38.0 41.0 33.8 41.0 25-29 38.0688349700126 40.0 37.8 41.0 33.0 41.0 30-34 37.31493873227208 39.6 36.0 41.0 32.0 41.0 35-39 36.24081258908461 38.0 35.0 40.2 30.6 41.0 40-44 35.26336515915618 35.8 34.6 39.6 30.0 41.0 45-49 34.39386260888467 35.0 33.8 38.0 28.6 40.6 50-54 33.13165996879462 34.8 32.6 35.4 26.2 39.2 55-59 33.279539239703034 35.0 33.0 35.0 27.2 37.6 60-64 32.93771865939291 35.0 33.0 35.0 27.0 36.0 65-69 32.62158842627698 35.0 33.0 35.0 26.8 35.0 70-74 32.31467364894322 35.0 33.0 35.0 26.0 35.0 75-79 32.071047328991895 35.0 33.0 35.0 26.6 35.0 80-84 31.7627371789987 35.0 33.0 35.0 24.6 35.0 85-89 31.444262919689244 35.0 33.0 35.0 24.0 35.0 90-94 30.986460013266658 35.0 31.8 35.0 22.8 35.0 95-99 30.348511123631017 34.8 31.0 35.0 18.6 35.0 100-101 28.923826643997586 33.5 29.0 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 891.0 3 303.0 4 378.0 5 541.0 6 740.0 7 1031.0 8 1176.0 9 1320.0 10 1470.0 11 1496.0 12 1511.0 13 1407.0 14 1437.0 15 1509.0 16 1568.0 17 1839.0 18 1981.0 19 2334.0 20 2757.0 21 3165.0 22 3824.0 23 4682.0 24 5604.0 25 6739.0 26 8197.0 27 9972.0 28 12221.0 29 14674.0 30 17894.0 31 22171.0 32 28794.0 33 39699.0 34 62521.0 35 142036.0 36 254713.0 37 113820.0 38 21246.0 39 2833.0 40 9.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 34.38918436725775 19.094024590297064 17.62425396397038 28.892537078474806 2 32.08824514149505 22.729407884545232 19.55132849939784 25.631018474561873 3 29.717101350777337 20.39333956333362 20.146346704513086 29.743212381375965 4 31.71350897533283 18.98937552472714 18.812342581857433 30.484772918082598 5 31.50426005047098 19.210329060790045 19.17997151637808 30.10543937236089 6 31.0073045225076 18.456318405722687 17.791078413368265 32.74529865840145 7 32.86906268465783 18.30006733569279 18.219364446004647 30.611505533644735 8 30.36112728281266 19.026458014237203 19.058565435424104 31.55384926752603 9 31.124623934272204 17.945581664984157 18.803661206009057 32.12613319473458 10-14 31.182845401131143 18.87836891092493 18.776653211177884 31.162132476766047 15-19 31.284996320943637 18.637037666291473 18.69490316398847 31.383062848776415 20-24 31.182369085437532 18.72505162379154 18.786413042799342 31.30616624797159 25-29 31.30883956712217 18.806925145814567 18.692022390921707 31.19221289614155 30-34 31.396865340354317 18.663497295174285 18.599212087717703 31.34042527675369 35-39 31.238123077768698 18.792732560318402 18.691770913751622 31.277373448161278 40-44 31.3558600030231 18.783914613686644 18.641179358478357 31.2190460248119 45-49 31.45759603649206 18.614396198390263 18.54026780661659 31.387739958501093 50-54 31.294506402725887 18.718735274879737 18.68777973043942 31.298978591954956 55-59 31.42099404999107 18.734795497331053 18.61941804090678 31.224792411771098 60-64 31.403604983366705 18.61891835508424 18.562528810010708 31.414947851538344 65-69 31.266928587936217 18.751922248108983 18.68031655413213 31.30083260982267 70-74 31.368352148586574 18.791035136657825 18.628012637054454 31.212600077701147 75-79 31.42808958867112 18.65821864502694 18.568924788539206 31.344766977762735 80-84 31.27556049134107 18.758080856661373 18.663265471834585 31.30309318016297 85-89 31.40303034467079 18.76754990299849 18.631860217888 31.19755953444272 90-94 31.46206822460378 18.654246142737755 18.55378430811627 31.329901324542192 95-99 31.352886872378992 18.723752440652937 18.648574708651935 31.27478597831613 100-101 31.520493989404162 18.802115669772633 18.59643249306998 31.080957847753226 >>END_MODULE >>Per base GC content pass #Base %GC 1 63.28172144573255 2 57.71926361605693 3 59.4603137321533 4 62.19828189341542 5 61.60969942283187 6 63.75260318090905 7 63.480568218302565 8 61.914976550338686 9 63.250757129006786 10-14 62.34497787789719 15-19 62.66805916972006 20-24 62.488535333409125 25-29 62.50105246326372 30-34 62.73729061710801 35-39 62.51549652592998 40-44 62.574906027835 45-49 62.84533599499314 50-54 62.59348499468085 55-59 62.645786461762164 60-64 62.81855283490505 65-69 62.567761197758884 70-74 62.58095222628772 75-79 62.77285656643385 80-84 62.578653671504036 85-89 62.600589879113514 90-94 62.791969549145975 95-99 62.62767285069513 100-101 62.601451837157384 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 21.0 1 14.5 2 7.5 3 5.5 4 4.0 5 5.0 6 4.5 7 4.5 8 5.5 9 7.0 10 10.0 11 9.0 12 13.0 13 21.5 14 28.5 15 32.5 16 36.5 17 49.5 18 63.5 19 88.0 20 101.5 21 111.0 22 142.5 23 184.0 24 230.0 25 291.5 26 352.5 27 401.0 28 508.0 29 632.5 30 739.5 31 904.5 32 1057.0 33 1184.0 34 1398.5 35 1599.5 36 1796.5 37 1948.0 38 2040.0 39 2199.0 40 2344.0 41 2579.0 42 2838.5 43 3082.0 44 3420.5 45 3863.5 46 4470.0 47 5243.0 48 6233.0 49 7337.0 50 8593.0 51 10138.5 52 12063.5 53 13962.5 54 15685.0 55 17699.5 56 19965.0 57 22337.0 58 24673.5 59 26967.0 60 29489.5 61 31924.0 62 34230.0 63 36549.0 64 38544.5 65 40198.5 66 41337.5 67 41541.5 68 40780.0 69 39252.5 70 36855.0 71 33564.5 72 29791.5 73 25392.5 74 20613.5 75 16108.5 76 11976.0 77 8289.0 78 5355.5 79 3238.5 80 1764.0 81 910.5 82 469.0 83 247.0 84 119.0 85 71.0 86 43.0 87 26.0 88 21.5 89 19.5 90 13.0 91 7.5 92 8.5 93 8.0 94 2.5 95 2.5 96 2.5 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.013241674297285582 2 0.006370994237373251 3 0.009369109172607724 4 0.010868166640224958 5 0.005371622592295094 6 0.004996858225390786 7 0.0044971724028517075 8 0.008119894616260026 9 0.013866281575459431 10-14 0.004572125276232569 15-19 0.003247957846504011 20-24 0.0 25-29 0.0 30-34 9.743873539512032E-4 35-39 1.2492145563476964E-4 40-44 0.0 45-49 0.0 50-54 2.4984291126953928E-5 55-59 0.0 60-64 0.0 65-69 9.99371645078157E-4 70-74 0.0 75-79 0.0 80-84 0.0 85-89 0.0 90-94 0.0 95-99 0.0 100-101 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 800503.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.12143988725581456 #Duplication Level Relative count 1 100.0 2 0.06904971579537267 3 0.0010007205187735168 4 5.003602593867584E-4 5 0.0 6 5.003602593867584E-4 7 0.0 8 0.0 9 0.0 10++ 0.0010007205187735168 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position AAAAA 61735 3.4045506 3.7182162 2 TTTTT 56630 3.2327635 3.488441 60-64 GATCG 255630 3.061493 4.176887 1 CGATC 252430 3.0396903 3.5221512 1 >>END_MODULE