##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002002_Airport_GTGGCC_L002_R2_013.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 62 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.4618055 34.0 31.0 34.0 31.0 34.0 2 32.6211845 34.0 31.0 34.0 31.0 34.0 3 32.6484325 34.0 31.0 34.0 31.0 34.0 4 36.06989875 37.0 37.0 37.0 35.0 37.0 5 36.070406 37.0 37.0 37.0 35.0 37.0 6 36.04931625 37.0 37.0 37.0 35.0 37.0 7 36.03357925 37.0 37.0 37.0 35.0 37.0 8 36.03948875 37.0 37.0 37.0 35.0 37.0 9 37.774287 39.0 38.0 39.0 35.0 39.0 10-14 37.9770136 39.4 38.2 39.4 35.2 39.4 15-19 39.116258349999995 41.0 39.0 41.0 36.0 41.0 20-24 38.89921615 40.8 38.8 41.0 35.2 41.0 25-29 38.4447258 40.0 38.0 41.0 34.2 41.0 30-34 37.760661500000005 39.8 36.6 41.0 33.0 41.0 35-39 36.69999790000001 38.4 35.0 40.6 31.6 41.0 40-44 35.718593649999995 36.2 35.0 39.8 31.0 41.0 45-49 34.7706454 35.0 34.6 38.2 30.0 40.8 50-54 33.4987654 34.8 33.2 35.4 28.0 39.2 55-59 33.6714171 35.0 34.0 35.0 30.0 37.8 60-64 33.32149035 35.0 34.0 35.0 29.4 36.2 65-69 33.054095849999996 35.0 34.0 35.0 29.0 35.0 70-74 32.7678247 35.0 33.0 35.0 29.0 35.0 75-79 32.51387455 35.0 33.0 35.0 27.0 35.0 80-84 32.2611173 35.0 33.0 35.0 27.0 35.0 85-89 31.94699 35.0 33.0 35.0 26.2 35.0 90-94 31.55088515 35.0 33.0 35.0 24.2 35.0 95-99 31.018550550000004 35.0 32.6 35.0 23.0 35.0 100-101 29.908505875 34.0 30.5 35.0 17.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 5211.0 3 1147.0 4 1630.0 5 2173.0 6 2797.0 7 3793.0 8 4565.0 9 5419.0 10 5773.0 11 5963.0 12 6018.0 13 5913.0 14 5812.0 15 6008.0 16 6310.0 17 7107.0 18 8115.0 19 9066.0 20 10600.0 21 13011.0 22 15573.0 23 18899.0 24 23092.0 25 27698.0 26 33721.0 27 40844.0 28 50255.0 29 61645.0 30 75444.0 31 95849.0 32 124524.0 33 172490.0 34 277969.0 35 668767.0 36 1379170.0 37 676414.0 38 123316.0 39 17803.0 40 96.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 34.427918575822126 19.02886778099159 17.561420996850487 28.981792646335798 2 32.119592642437865 22.680456969444183 19.514123632610012 25.685826755507946 3 29.798114299789074 20.382091224279797 20.112151776236576 29.707642699694553 4 31.716448701989464 18.974404883662427 18.778429223954394 30.53071719039372 5 31.682774920533944 19.147492793544295 19.141441571197383 30.028290714724378 6 30.979026224720453 18.41866535976476 17.785176331739713 32.81713208377508 7 32.89758120435424 18.24915313021128 18.275308760210635 30.577956905223854 8 30.393400586811225 18.990367603499063 19.079792172899506 31.53643963679021 9 31.070734938921397 17.98971544668683 18.759106271216705 32.18044334317507 10-14 31.219896347270947 18.873771962995942 18.759070663941348 31.147261025791767 15-19 31.286218141212558 18.60838226094314 18.695109272634262 31.410290325210045 20-24 31.205782555361978 18.675527576775156 18.748769037942306 31.369920829920556 25-29 31.333065058403797 18.797648967588202 18.67485018538571 31.194435788622286 30-34 31.403253403764275 18.63437672898583 18.566552477757966 31.395817389491924 35-39 31.27411177462661 18.716402527226002 18.706501798532372 31.30298389961501 40-44 31.403167962492535 18.723407936196345 18.616052173970434 31.25737192734068 45-49 31.459677289514325 18.57171314681274 18.528602547575414 31.440007016097525 50-54 31.312833119474842 18.68057661889177 18.640485027255583 31.366105234377805 55-59 31.39821958367949 18.724497487531412 18.625073783998452 31.252209144790644 60-64 31.44283 18.604715 18.53224 31.420215000000002 65-69 31.312392724613808 18.68526226694416 18.656062161823783 31.346282846618244 70-74 31.4106 18.729670000000002 18.596865 31.262865 75-79 31.45794303084018 18.598664528597755 18.542404469524694 31.40098797103737 80-84 31.323428727543472 18.700803868175278 18.643143640417378 31.332623763863864 85-89 31.42799 18.74188 18.598029999999998 31.232100000000003 90-94 31.479689999999998 18.590825 18.51818 31.411305 95-99 31.374295000000004 18.670315000000002 18.642445 31.312945 100-101 31.569799999999997 18.7823875 18.550487500000003 31.097324999999998 >>END_MODULE >>Per base GC content pass #Base %GC 1 63.409711222157924 2 57.80541939794581 3 59.50575699948363 4 62.24716589238318 5 61.71106563525832 6 63.796158308495535 7 63.47553810957809 8 61.92984022360144 9 63.25117828209647 10-14 62.36715737306271 15-19 62.69650846642259 20-24 62.57570338528253 25-29 62.52750084702608 30-34 62.79907079325619 35-39 62.577095674241626 40-44 62.660539889833224 45-49 62.89968430561185 50-54 62.67893835385265 55-59 62.65042872847013 60-64 62.86304499999999 65-69 62.65867557123206 70-74 62.67346499999999 75-79 62.85893100187755 80-84 62.656052491407344 85-89 62.660090000000004 90-94 62.890995000000004 95-99 62.68724 100-101 62.667125 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 124.0 1 86.0 2 39.0 3 26.5 4 25.0 5 27.5 6 29.5 7 31.0 8 35.0 9 48.5 10 58.5 11 64.5 12 76.5 13 102.5 14 128.0 15 151.5 16 197.5 17 234.0 18 271.5 19 363.5 20 428.0 21 529.0 22 702.5 23 883.5 24 1090.0 25 1367.0 26 1695.5 27 2071.0 28 2569.0 29 3129.0 30 3715.0 31 4416.0 32 5200.5 33 6045.0 34 6864.0 35 7671.0 36 8560.5 37 9370.0 38 10186.0 39 11074.5 40 11920.5 41 12807.5 42 13830.5 43 15238.5 44 17139.5 45 19474.5 46 22240.0 47 25834.5 48 30552.0 49 36287.5 50 42849.5 51 50348.5 52 59158.5 53 68513.5 54 78126.5 55 88543.5 56 99694.5 57 110615.0 58 121930.0 59 134153.5 60 146405.0 61 159052.5 62 170949.5 63 182353.0 64 193086.5 65 201030.5 66 206540.5 67 208045.0 68 204456.0 69 196919.0 70 185007.5 71 168536.0 72 148980.5 73 127228.0 74 104243.5 75 81610.5 76 60541.0 77 42389.5 78 27509.5 79 16416.5 80 9237.0 81 4845.0 82 2417.5 83 1219.0 84 645.5 85 392.5 86 258.5 87 193.0 88 150.0 89 114.5 90 87.5 91 65.0 92 50.0 93 39.0 94 28.5 95 24.0 96 17.5 97 10.5 98 11.0 99 7.0 100 2.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03215 2 0.02395 3 0.023875 4 0.025849999999999998 5 0.0202 6 0.018000000000000002 7 0.021525 8 0.027475 9 0.03455 10-14 0.01421 15-19 0.013850000000000001 20-24 0.0019950000000000002 25-29 0.0030800000000000003 30-34 0.013640000000000001 35-39 0.00736 40-44 7.1E-4 45-49 0.0013900000000000002 50-54 0.0039700000000000004 55-59 0.0037249999999999996 60-64 0.0 65-69 3.5999999999999997E-4 70-74 0.0 75-79 1.0499999999999999E-4 80-84 3.95E-4 85-89 0.0 90-94 0.0 95-99 0.0 100-101 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.22737835258136038 #Duplication Level Relative count 1 100.0 2 0.16829282952337066 3 0.002003486065754413 4 5.008715164386032E-4 5 0.0010017430328772064 6 0.0010017430328772064 7 0.0 8 0.0 9 5.008715164386032E-4 10++ 0.0010017430328772064 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position AAAAA 308265 3.4363914 4.0071898 1 TTTTT 284595 3.249918 3.4773638 10-14 GATCG 1287405 3.086884 4.1607094 1 CGATC 1275940 3.0750432 3.4945412 1 >>END_MODULE