##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002002_Airport_GTGGCC_L002_R2_012.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 62 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.702022 34.0 31.0 34.0 31.0 34.0 2 32.84530975 34.0 31.0 34.0 31.0 34.0 3 32.89265575 34.0 33.0 34.0 31.0 34.0 4 36.23610025 37.0 37.0 37.0 35.0 37.0 5 36.255371 37.0 37.0 37.0 35.0 37.0 6 36.24541425 37.0 37.0 37.0 35.0 37.0 7 36.21687175 37.0 37.0 37.0 35.0 37.0 8 36.2181305 37.0 37.0 37.0 35.0 37.0 9 37.98349875 39.0 39.0 39.0 37.0 39.0 10-14 38.239909850000004 39.4 39.2 39.4 37.0 39.4 15-19 39.39221525 41.0 40.0 41.0 36.8 41.0 20-24 39.1715538 41.0 39.4 41.0 35.8 41.0 25-29 38.75878945 40.4 38.6 41.0 35.0 41.0 30-34 38.012712400000005 40.0 37.2 41.0 33.8 41.0 35-39 36.94342675 38.6 35.0 40.8 32.6 41.0 40-44 35.91046365 36.4 35.0 39.8 31.4 41.0 45-49 34.919872999999995 35.0 34.8 38.4 30.8 40.8 50-54 33.6027051 34.8 33.4 35.4 28.4 39.2 55-59 33.818939799999995 35.0 35.0 35.0 30.6 38.0 60-64 33.46600925 35.0 34.4 35.0 30.0 36.2 65-69 33.15667765 35.0 34.0 35.0 29.6 35.0 70-74 32.858079 35.0 33.8 35.0 29.0 35.0 75-79 32.54307755 35.0 33.0 35.0 27.8 35.0 80-84 32.228155650000005 35.0 33.0 35.0 27.0 35.0 85-89 31.87737635 35.0 33.0 35.0 26.2 35.0 90-94 31.42712065 35.0 33.0 35.0 24.0 35.0 95-99 30.813596699999998 35.0 32.4 35.0 21.8 35.0 100-101 29.70860225 34.0 30.5 35.0 10.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 6085.0 3 1259.0 4 1979.0 5 2432.0 6 3100.0 7 3676.0 8 4353.0 9 4915.0 10 5295.0 11 5487.0 12 5595.0 13 5660.0 14 5744.0 15 5891.0 16 6388.0 17 6900.0 18 7798.0 19 8794.0 20 10154.0 21 12186.0 22 14401.0 23 17428.0 24 20911.0 25 25105.0 26 30027.0 27 36849.0 28 44697.0 29 54739.0 30 68091.0 31 87294.0 32 115699.0 33 166242.0 34 276119.0 35 677611.0 36 1393007.0 37 706454.0 38 131905.0 39 19605.0 40 125.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 34.4595044366667 18.99958909094003 17.55202303893526 28.988883433458007 2 32.13939186196923 22.662186404589683 19.480007706184214 25.718414027256877 3 29.79419331771921 20.398723081338137 20.142068335014258 29.665015265928396 4 31.76184291284276 18.911654768853996 18.769536562035473 30.556965756267772 5 31.67866217984689 19.13912502010788 19.103174756059822 30.079038043985413 6 30.952023564176805 18.42092096224058 17.77850494364381 32.848550529938805 7 32.8812506833279 18.235454091248325 18.251391111746035 30.631904113677745 8 30.360868839591358 18.932734216445237 19.035648005316585 31.67074893864682 9 31.05304555145056 17.957213103390114 18.82379203106751 32.16594931409182 10-14 31.186158786098833 18.835457417579534 18.790389058649097 31.187994737672536 15-19 31.276753933448543 18.591537472715792 18.68655195625882 31.445156637576847 20-24 31.21884222556203 18.659212239042855 18.73099727082851 31.3909482645666 25-29 31.31444493218039 18.774245268076363 18.67099384087357 31.240315958869676 30-34 31.38600534359528 18.612341198639314 18.57900688974088 31.422646568024525 35-39 31.265850447852916 18.715289454356686 18.668725696146694 31.350134401643704 40-44 31.396693193716334 18.700247405670744 18.600939108462512 31.30212029215041 45-49 31.43809002777425 18.55680419104123 18.521568800026404 31.483536981158117 50-54 31.34418545868417 18.660718318014094 18.633351192983096 31.361745030318644 55-59 31.3912993510144 18.68794653799414 18.59940599216048 31.321348118830976 60-64 31.46192 18.588285 18.499035 31.45076 65-69 31.327325000000002 18.671845 18.617475 31.383355 70-74 31.43747 18.67731 18.577615 31.307605 75-79 31.465041542781 18.592309535419265 18.496397732277366 31.44625118952236 80-84 31.350168675267497 18.66641958862206 18.6064568273369 31.37695490877355 85-89 31.45255157262758 18.681715934085798 18.567965928398298 31.29776656488833 90-94 31.517319999999998 18.541615 18.48897 31.452095000000003 95-99 31.410506924129084 18.626583231649573 18.589633076458924 31.373276767762427 100-101 31.629749723122924 18.706740300552255 18.513701352760144 31.149808623564677 >>END_MODULE >>Per base GC content pass #Base %GC 1 63.44838787012471 2 57.8578058892261 3 59.4592085836476 4 62.31880866911054 5 61.7577002238323 6 63.80057409411562 7 63.51315479700565 8 62.03161777823818 9 63.21899486554238 10-14 62.37415352377137 15-19 62.72191057102538 20-24 62.60979049012864 25-29 62.554760891050066 30-34 62.808651911619805 35-39 62.61598484949662 40-44 62.698813485866744 45-49 62.92162700893237 50-54 62.70593048900282 55-59 62.71264746984537 60-64 62.91268 65-69 62.710679999999996 70-74 62.74507499999999 75-79 62.91129273230337 80-84 62.727123584041045 85-89 62.750318137515904 90-94 62.969415 95-99 62.7837836918915 100-101 62.7795583466876 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 143.0 1 87.5 2 26.5 3 21.0 4 22.0 5 23.0 6 24.0 7 26.0 8 30.5 9 36.5 10 46.5 11 62.5 12 77.0 13 96.5 14 141.0 15 173.5 16 198.5 17 252.5 18 308.0 19 366.0 20 471.0 21 581.0 22 703.5 23 890.0 24 1114.0 25 1415.5 26 1773.5 27 2127.5 28 2590.0 29 3172.0 30 3828.0 31 4552.5 32 5262.0 33 6037.0 34 6902.5 35 7735.0 36 8603.5 37 9397.5 38 10221.0 39 11092.5 40 11785.5 41 12635.5 42 13868.0 43 15397.0 44 17180.0 45 19367.0 46 22365.0 47 26179.5 48 30735.5 49 36172.0 50 42801.5 51 50531.0 52 58728.5 53 67739.0 54 77810.5 55 88086.0 56 98864.0 57 110084.5 58 121691.0 59 133937.5 60 146169.0 61 158497.5 62 170953.5 63 182329.0 64 192282.0 65 200167.5 66 205635.0 67 207123.0 68 203751.0 69 196247.5 70 184200.5 71 168351.5 72 148804.5 73 127080.0 74 104675.0 75 82096.0 76 61109.5 77 42891.0 78 28361.5 79 17550.5 80 10068.5 81 5714.0 82 3174.5 83 1782.5 84 1130.0 85 790.0 86 583.5 87 428.5 88 331.5 89 260.5 90 210.0 91 188.0 92 148.0 93 106.0 94 79.5 95 60.5 96 49.5 97 40.5 98 27.5 99 17.5 100 12.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.09955000000000001 2 0.08025 3 0.079775 4 0.083175 5 0.070275 6 0.06865 7 0.075425 8 0.086275 9 0.101425 10-14 0.051829999999999994 15-19 0.052079999999999994 20-24 0.02094 25-29 0.025595 30-34 0.057925000000000004 35-39 0.040285 40-44 0.008355 45-49 0.015300000000000001 50-54 0.026035000000000003 55-59 0.023205 60-64 0.0 65-69 0.0 70-74 0.0 75-79 0.00188 80-84 0.004605 85-89 4.9999999999999996E-6 90-94 0.0 95-99 4.1999999999999996E-4 100-101 7.5E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.25236372358925874 #Duplication Level Relative count 1 100.0 2 0.18687093881354488 3 0.004508950266278563 4 0.0025049723701547574 5 5.009944740309515E-4 6 0.001001988948061903 7 5.009944740309515E-4 8 5.009944740309515E-4 9 5.009944740309515E-4 10++ 0.002003977896123806 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position AAAAA 315030 3.53734 4.087355 60-64 TTTTT 288985 3.3334908 3.6409774 80-84 GATCG 1283225 3.0790253 4.1815395 1 CGATC 1269965 3.062231 3.5702512 1 >>END_MODULE