##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002002_Airport_GTGGCC_L002_R2_011.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 62 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.5381825 34.0 31.0 34.0 31.0 34.0 2 32.73294225 34.0 31.0 34.0 31.0 34.0 3 32.76658325 34.0 31.0 34.0 31.0 34.0 4 36.1303225 37.0 37.0 37.0 35.0 37.0 5 36.1572365 37.0 37.0 37.0 35.0 37.0 6 36.15510225 37.0 37.0 37.0 35.0 37.0 7 36.14943675 37.0 37.0 37.0 35.0 37.0 8 36.0981165 37.0 37.0 37.0 35.0 37.0 9 37.8483445 39.0 38.0 39.0 35.0 39.0 10-14 38.110092949999995 39.4 38.2 39.4 35.2 39.4 15-19 39.23905895 41.0 39.0 41.0 36.0 41.0 20-24 39.029641500000004 41.0 39.0 41.0 35.4 41.0 25-29 38.5110775 40.0 38.0 41.0 34.6 41.0 30-34 37.9019931 39.8 36.8 41.0 33.4 41.0 35-39 36.8439194 38.6 35.0 40.6 32.4 41.0 40-44 35.8630704 36.4 35.0 39.8 31.0 41.0 45-49 34.94659395 35.0 34.8 38.4 30.8 40.8 50-54 33.66966635 34.8 33.4 35.4 28.6 39.2 55-59 33.8324532 35.0 34.6 35.0 30.2 38.0 60-64 33.4835657 35.0 34.0 35.0 30.0 36.2 65-69 33.2031735 35.0 34.0 35.0 29.6 35.0 70-74 32.9530806 35.0 33.8 35.0 29.0 35.0 75-79 32.6797225 35.0 33.0 35.0 28.6 35.0 80-84 32.39025175 35.0 33.0 35.0 27.0 35.0 85-89 32.073586 35.0 33.0 35.0 27.0 35.0 90-94 31.69047365 35.0 33.0 35.0 25.0 35.0 95-99 31.119383499999998 35.0 33.0 35.0 23.6 35.0 100-101 29.970695125 34.0 30.5 35.0 17.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 5622.0 3 1084.0 4 1554.0 5 1901.0 6 2519.0 7 3228.0 8 3741.0 9 4430.0 10 4745.0 11 5123.0 12 5026.0 13 5134.0 14 5029.0 15 5387.0 16 5720.0 17 6272.0 18 7169.0 19 8247.0 20 9734.0 21 11615.0 22 13679.0 23 17180.0 24 20724.0 25 25197.0 26 30590.0 27 37707.0 28 46484.0 29 57165.0 30 72184.0 31 91994.0 32 122203.0 33 172129.0 34 282771.0 35 686011.0 36 1396803.0 37 681072.0 38 125102.0 39 17616.0 40 109.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 34.42855295059816 19.042830977046247 17.56443585586023 28.964180216495368 2 32.14464768732419 22.714143042558916 19.46593455199005 25.675274718126843 3 29.815046506008784 20.36752078175518 20.16909547776401 29.648337234472027 4 31.748904179236686 18.93679814515127 18.805677285630647 30.508620389981395 5 31.650503208601883 19.151584745749997 19.14610829175146 30.05180375389666 6 30.959614056925755 18.443444951525816 17.770675137823417 32.82626585372501 7 32.86812118628848 18.25321068422056 18.2587888275043 30.619879301986668 8 30.369044133654633 18.98973292595345 19.105791150247605 31.535431790144308 9 31.026007058826472 17.98466875937559 18.813962013454557 32.17536216834338 10-14 31.189604680452526 18.831521334123824 18.79419570751793 31.184678277905718 15-19 31.255343029563225 18.607320696418682 18.71593322365372 31.421403050364372 20-24 31.171015492540597 18.676370279055945 18.765447124611526 31.387167103791924 25-29 31.37349244322682 18.793193508618774 18.672521960351606 31.160792087802804 30-34 31.384374377518714 18.61618824679313 18.598744392573536 31.40069298311462 35-39 31.2684527892374 18.69975152006504 18.715478098227155 31.316317592470405 40-44 31.414143217251684 18.715985053937143 18.625836055829076 31.244035672982097 45-49 31.441883353851157 18.571294355015528 18.532248736142467 31.454573554990844 50-54 31.29597342573599 18.650725428641923 18.674448163873294 31.378852981748796 55-59 31.38768852021857 18.71082529944296 18.630760163264473 31.270726017073997 60-64 31.44454 18.597165 18.514400000000002 31.443894999999998 65-69 31.304491044581045 18.66943375463991 18.682823857743706 31.343251343035337 70-74 31.41443 18.70822 18.61806 31.25929 75-79 31.446230597034365 18.585476948941576 18.551171899199254 31.417120554824805 80-84 31.3227989101576 18.666096065411345 18.660921054026318 31.350183970404732 85-89 31.433974999999997 18.70747 18.60961 31.248945 90-94 31.475160000000002 18.58493 18.534585 31.405325 95-99 31.340846268169255 18.68111873622375 18.644383728876747 31.333651266730257 100-101 31.514940757470377 18.785984392992198 18.583359291679646 31.115715557857783 >>END_MODULE >>Per base GC content pass #Base %GC 1 63.39273316709353 2 57.81992240545103 3 59.463383740480815 4 62.257524569218084 5 61.70230696249854 6 63.78587991065076 7 63.48800048827514 8 61.90447592379894 9 63.20136922716985 10-14 62.37428295835824 15-19 62.67674607992759 20-24 62.55818259633252 25-29 62.53428453102961 30-34 62.78506736063333 35-39 62.5847703817078 40-44 62.658178890233785 45-49 62.896456908842005 50-54 62.67482640748479 55-59 62.65841453729257 60-64 62.888435 65-69 62.64774238761639 70-74 62.67372 75-79 62.86335115185917 80-84 62.67298288056233 85-89 62.682919999999996 90-94 62.880485 95-99 62.67449753489951 100-101 62.63065631532816 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 134.0 1 82.0 2 33.5 3 41.0 4 40.0 5 39.0 6 44.0 7 45.5 8 46.5 9 47.0 10 65.0 11 86.5 12 100.5 13 115.0 14 136.0 15 171.0 16 198.5 17 253.0 18 318.0 19 377.0 20 465.5 21 584.5 22 706.5 23 849.5 24 1080.5 25 1383.5 26 1698.0 27 2059.5 28 2526.0 29 3072.5 30 3719.0 31 4461.5 32 5186.0 33 6020.5 34 6903.5 35 7701.5 36 8512.0 37 9353.5 38 10160.0 39 10983.5 40 11829.0 41 12718.0 42 13921.0 43 15276.5 44 16969.0 45 19287.5 46 22232.5 47 25882.5 48 30555.0 49 36229.5 50 42871.0 51 50370.5 52 58895.0 53 68491.0 54 78456.5 55 88675.0 56 99259.0 57 110358.5 58 122222.5 59 134347.5 60 146305.5 61 158612.0 62 171555.5 63 183491.0 64 193268.5 65 201576.5 66 207150.5 67 208020.0 68 204600.5 69 197168.5 70 184878.5 71 168216.5 72 148578.5 73 127041.5 74 104247.0 75 81346.5 76 60093.0 77 41878.5 78 26982.5 79 16228.0 80 9309.5 81 4829.0 82 2415.0 83 1268.0 84 708.0 85 443.5 86 289.5 87 210.5 88 172.0 89 126.0 90 92.5 91 70.5 92 53.0 93 53.0 94 45.5 95 31.5 96 23.0 97 15.5 98 9.5 99 7.5 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.074075 2 0.0703 3 0.05055 4 0.034975 5 0.02655 6 0.021525 7 0.05635 8 0.09325 9 0.089625 10-14 0.02847 15-19 0.039155 20-24 0.007685 25-29 0.009569999999999999 30-34 0.022095 35-39 0.010035 40-44 0.004435 45-49 0.0015849999999999998 50-54 0.01153 55-59 0.006415 60-64 0.0 65-69 7.700000000000001E-4 70-74 0.0 75-79 1.45E-4 80-84 2.2E-4 85-89 0.0 90-94 0.0 95-99 1.9999999999999998E-5 100-101 4.9999999999999996E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.23237451776041415 #Duplication Level Relative count 1 100.0 2 0.1713057808187615 3 0.0030053645757677455 4 0.0 5 0.0010017881919225818 6 0.0010017881919225818 7 5.008940959612909E-4 8 0.0 9 0.0 10++ 0.0020035763838451635 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position AAAAA 302795 3.3906984 4.0048485 1 TTTTT 287595 3.29021 3.6047068 90-94 GATCG 1284420 3.0806649 4.312248 1 CGATC 1270485 3.0625312 3.484654 1 >>END_MODULE