##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002002_Airport_GTGGCC_L002_R2_006.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 62 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.63970875 34.0 31.0 34.0 31.0 34.0 2 32.82472775 34.0 31.0 34.0 31.0 34.0 3 32.83949675 34.0 31.0 34.0 31.0 34.0 4 36.2260965 37.0 37.0 37.0 35.0 37.0 5 36.23738475 37.0 37.0 37.0 35.0 37.0 6 36.20202575 37.0 37.0 37.0 35.0 37.0 7 36.1986385 37.0 37.0 37.0 35.0 37.0 8 36.17916925 37.0 37.0 37.0 35.0 37.0 9 37.95843025 39.0 39.0 39.0 37.0 39.0 10-14 38.26005285 39.4 39.2 39.4 37.0 39.4 15-19 39.42877120000001 41.0 40.0 41.0 37.0 41.0 20-24 39.23124815 41.0 39.2 41.0 36.2 41.0 25-29 38.82039015 40.4 38.6 41.0 35.0 41.0 30-34 38.1111449 40.0 37.2 41.0 33.8 41.0 35-39 37.105487849999996 38.6 35.0 40.8 33.0 41.0 40-44 36.07871615 36.4 35.0 39.8 32.0 41.0 45-49 35.1665517 35.0 35.0 38.4 31.2 41.0 50-54 33.91877495 34.8 33.8 35.6 29.6 39.2 55-59 34.0963702 35.0 35.0 35.0 31.0 38.0 60-64 33.7318868 35.0 35.0 35.0 31.0 36.2 65-69 33.430907049999995 35.0 34.2 35.0 30.4 35.0 70-74 33.19008475 35.0 34.0 35.0 30.0 35.0 75-79 32.966385 35.0 34.0 35.0 29.2 35.0 80-84 32.7214794 35.0 33.0 35.0 29.0 35.0 85-89 32.42688149999999 35.0 33.0 35.0 27.8 35.0 90-94 32.094539299999994 35.0 33.0 35.0 27.0 35.0 95-99 31.607948450000002 35.0 33.0 35.0 25.2 35.0 100-101 30.587362874999997 34.0 31.5 35.0 22.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 5710.0 3 843.0 4 1178.0 5 1509.0 6 2024.0 7 2622.0 8 3217.0 9 3667.0 10 3866.0 11 4188.0 12 4265.0 13 4354.0 14 4337.0 15 4530.0 16 4805.0 17 5321.0 18 6091.0 19 6851.0 20 8172.0 21 9755.0 22 12093.0 23 14456.0 24 17890.0 25 21585.0 26 26646.0 27 33114.0 28 40505.0 29 50951.0 30 63511.0 31 81685.0 32 108926.0 33 154903.0 34 255985.0 35 655199.0 36 1471514.0 37 747923.0 38 135240.0 39 20448.0 40 121.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 34.41983523058628 19.027884998451263 17.54808528986892 29.00419448109354 2 32.17934576250908 22.656852078091205 19.447087148150178 25.71671501124953 3 29.786996525865778 20.3753967220993 20.10837897097546 29.729227781059457 4 31.709827311533793 18.917039704956643 18.78481082359596 30.5883221599136 5 31.70502766782985 19.080877871318 19.099300563469054 30.1147938973831 6 31.030928764607673 18.3960102129092 17.76108464822619 32.811976374256936 7 32.91409590062535 18.22478069433914 18.242689331236395 30.61843407379911 8 30.386029688040118 18.949546363139937 19.06890470870552 31.595519240114424 9 31.081676344279092 17.939806728225747 18.7841342750255 32.19438265246966 10-14 31.21302358004865 18.800836906011085 18.775163591033905 31.210975922906357 15-19 31.29517768684838 18.579071756092567 18.691939962842376 31.433810594216677 20-24 31.192624242042477 18.6403778138672 18.74203504487693 31.424962899213394 25-29 31.316001367412433 18.74821117555438 18.690533470981915 31.245253986051274 30-34 31.40130661308 18.59007623786735 18.565358560247837 31.443258588804813 35-39 31.286812620705064 18.688650427626502 18.65654497602975 31.367991975638688 40-44 31.402062105254526 18.679725626195605 18.60927743282862 31.30893483572126 45-49 31.46018917475973 18.541216588851064 18.524887719008966 31.47370651738024 50-54 31.30510581617285 18.64026483006124 18.64058997501086 31.41403937875505 55-59 31.393950103301073 18.69826941687926 18.599020741062116 31.30875973875755 60-64 31.4528061707271 18.567261352350556 18.51643629390174 31.463496183020613 65-69 31.3096 18.66107 18.634575 31.394755000000004 70-74 31.432545 18.68215 18.591335 31.293969999999998 75-79 31.46281710437051 18.56081753810983 18.52539432699574 31.450971030523917 80-84 31.341378475857194 18.653567950511086 18.626977301327667 31.37807627230405 85-89 31.43001716273599 18.69392704149682 18.583150518319627 31.292905277447563 90-94 31.475913230439478 18.563904343223033 18.49569921704355 31.464483209293938 95-99 31.359146404366513 18.652502346126855 18.635190487698853 31.35316076180778 100-101 31.53472413831471 18.73234807388583 18.549570040304932 31.183357747494522 >>END_MODULE >>Per base GC content pass #Base %GC 1 63.42402971167982 2 57.89606077375862 3 59.51622430692524 4 62.298149471447395 5 61.81982156521295 6 63.8429051388646 7 63.53252997442447 8 61.98154892815454 9 63.27605899674875 10-14 62.423999502955006 15-19 62.72898828106506 20-24 62.61758714125587 25-29 62.56125535346371 30-34 62.844565201884805 35-39 62.65480459634375 40-44 62.71099694097578 45-49 62.93389569213998 50-54 62.7191451949279 55-59 62.702709842058624 60-64 62.91630235374771 65-69 62.704355 70-74 62.726515000000006 75-79 62.91378813489443 80-84 62.719454748161255 85-89 62.722922440183545 90-94 62.94039643973341 95-99 62.712307166174284 100-101 62.71808188580924 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 11.0 1 9.5 2 10.0 3 14.0 4 12.5 5 8.0 6 8.5 7 15.5 8 29.0 9 38.0 10 49.0 11 73.5 12 99.5 13 131.5 14 176.5 15 220.0 16 257.0 17 322.0 18 409.0 19 461.5 20 539.0 21 662.5 22 793.0 23 929.0 24 1130.0 25 1468.0 26 1788.0 27 2114.0 28 2562.0 29 3108.5 30 3740.5 31 4456.5 32 5112.0 33 5916.5 34 6769.5 35 7640.5 36 8572.5 37 9347.0 38 10180.5 39 10994.5 40 11877.5 41 12731.5 42 13670.5 43 15149.0 44 16943.5 45 19069.5 46 21867.0 47 25562.5 48 30387.5 49 36057.0 50 42587.5 51 50078.0 52 58682.0 53 68122.5 54 77948.5 55 88458.5 56 99131.5 57 110234.5 58 121783.0 59 133487.5 60 146166.5 61 159013.5 62 171239.5 63 182889.0 64 193161.5 65 201642.5 66 206874.0 67 208062.5 68 204697.5 69 196669.5 70 185136.5 71 169490.5 72 149952.5 73 127885.0 74 104757.5 75 81759.0 76 60614.5 77 42317.0 78 27356.0 79 16537.5 80 9186.5 81 4723.0 82 2411.5 83 1258.0 84 696.0 85 402.5 86 282.0 87 205.0 88 137.5 89 104.0 90 79.5 91 59.5 92 60.0 93 52.5 94 31.5 95 25.5 96 23.0 97 13.0 98 10.5 99 9.0 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.160475 2 0.118075 3 0.11900000000000001 4 0.116375 5 0.12317499999999999 6 0.18515 7 0.187825 8 0.1955 9 0.169075 10-14 0.129765 15-19 0.09587000000000001 20-24 0.066135 25-29 0.07404 30-34 0.111975 35-39 0.07927500000000001 40-44 0.04002 45-49 0.05432 50-54 0.04458 55-59 0.05911999999999999 60-64 1.15E-4 65-69 0.0 70-74 0.0 75-79 0.009065 80-84 0.021245 85-89 0.0013750000000000001 90-94 1.85E-4 95-99 0.010735 100-101 0.0153375 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.2922077922077966 #Duplication Level Relative count 1 100.0 2 0.17132980988402674 3 0.007013500989404604 4 0.0020038574255441723 5 5.009643563860431E-4 6 0.0015028930691581295 7 0.0010019287127720862 8 0.0015028930691581295 9 5.009643563860431E-4 10++ 0.007514465345790647 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position AAAAA 285440 3.2123318 3.6931472 1 TTTTT 273035 3.1452768 3.3913546 10-14 GATCG 1285765 3.0875325 4.216409 1 CGATC 1278065 3.081777 3.508307 6 >>END_MODULE