##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002002_Airport_GTGGCC_L002_R2_005.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 62 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.693182 34.0 31.0 34.0 31.0 34.0 2 32.87264475 34.0 31.0 34.0 31.0 34.0 3 32.89610525 34.0 33.0 34.0 31.0 34.0 4 36.267624 37.0 37.0 37.0 35.0 37.0 5 36.2592305 37.0 37.0 37.0 35.0 37.0 6 36.239892 37.0 37.0 37.0 35.0 37.0 7 36.22933 37.0 37.0 37.0 35.0 37.0 8 36.21434175 37.0 37.0 37.0 35.0 37.0 9 37.9894395 39.0 39.0 39.0 37.0 39.0 10-14 38.2914981 39.4 39.2 39.4 37.0 39.4 15-19 39.45892740000001 41.0 40.0 41.0 37.0 41.0 20-24 39.24735115 41.0 39.4 41.0 36.2 41.0 25-29 38.8206847 40.4 38.6 41.0 35.0 41.0 30-34 38.095529649999996 40.0 37.2 41.0 34.2 41.0 35-39 37.051320950000004 38.6 35.0 40.8 33.0 41.0 40-44 36.0106062 36.4 35.0 40.0 32.0 41.0 45-49 35.0758008 35.0 35.0 38.4 31.0 41.0 50-54 33.80872240000001 34.8 33.6 35.6 29.4 39.2 55-59 33.98621145 35.0 35.0 35.0 31.0 38.0 60-64 33.600306149999994 35.0 34.8 35.0 31.0 36.2 65-69 33.2660151 35.0 34.0 35.0 30.0 35.0 70-74 32.97232235 35.0 34.0 35.0 29.0 35.0 75-79 32.712690099999996 35.0 33.2 35.0 29.0 35.0 80-84 32.3835816 35.0 33.0 35.0 27.4 35.0 85-89 32.0390443 35.0 33.0 35.0 27.0 35.0 90-94 31.64102615 35.0 33.0 35.0 25.0 35.0 95-99 31.037309450000002 35.0 32.6 35.0 23.0 35.0 100-101 29.82893725 34.0 30.5 35.0 17.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 6690.0 3 1078.0 4 1690.0 5 2027.0 6 2617.0 7 3265.0 8 3775.0 9 4378.0 10 4426.0 11 4803.0 12 4875.0 13 4908.0 14 5065.0 15 5426.0 16 5952.0 17 6439.0 18 7289.0 19 8086.0 20 9470.0 21 11076.0 22 13162.0 23 15791.0 24 18991.0 25 22922.0 26 27862.0 27 34047.0 28 41886.0 29 52123.0 30 65358.0 31 83261.0 32 112200.0 33 160953.0 34 272510.0 35 684992.0 36 1424018.0 37 713575.0 38 133333.0 39 19554.0 40 127.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 34.392682535865994 19.035224813657127 17.559759958323315 29.012332692153564 2 32.15199791721949 22.67066533822653 19.505940430474684 25.6713963140793 3 29.818093874966735 20.377471670347315 20.07376487521133 29.73066957947462 4 31.762757729861928 18.923332836846498 18.772809710781814 30.541099722509752 5 31.737834940138143 19.107004864597084 19.104626761767417 30.050533433497357 6 30.986031211972588 18.382560331607795 17.75999414856923 32.87141430785039 7 32.88160924233653 18.24716656842584 18.274997989674567 30.596226199563066 8 30.366408059483994 18.9768847071652 19.032057134782082 31.624650098568726 9 31.062813574369546 17.92700975681609 18.793294180480554 32.2168824883338 10-14 31.217399015594292 18.806037665633443 18.767055812549813 31.20950750622245 15-19 31.274120412422572 18.57358729931171 18.711167944295383 31.441124343970333 20-24 31.213881393841753 18.65626663305425 18.735327197399567 31.39452477570443 25-29 31.307374722087573 18.770700490951516 18.68254621381008 31.239378573150834 30-34 31.389292212998253 18.596013895064885 18.579402537842903 31.43529135409396 35-39 31.286710223012783 18.673009657369498 18.67690829850539 31.36337182111233 40-44 31.42026233575 18.68111032618399 18.59935083675782 31.29927650130819 45-49 31.45327371602466 18.54552299058384 18.51996113637527 31.481242157016226 50-54 31.327080708213707 18.636402341447443 18.644307092993596 31.39220985734525 55-59 31.419970203941975 18.680494169833928 18.58556889665419 31.313966729569902 60-64 31.471126731654337 18.54892618043301 18.50847034906567 31.47147673884698 65-69 31.315488998858193 18.637650823073127 18.637410822161122 31.409449355907554 70-74 31.42119 18.69055 18.573375 31.314884999999997 75-79 31.471609007836655 18.554902897116357 18.52444283617723 31.449045258869763 80-84 31.349836570308725 18.650876157300832 18.601125269354768 31.39816200303567 85-89 31.44581697178636 18.68289278100821 18.57614676587026 31.295143481335174 90-94 31.51655081677437 18.5448679515232 18.47324647253966 31.46533475916278 95-99 31.412506974247744 18.626372769015916 18.574884866147457 31.38623539058888 100-101 31.591287692040115 18.73369774447616 18.469660753039953 31.20535381044377 >>END_MODULE >>Per base GC content pass #Base %GC 1 63.40501522801956 2 57.823394231298785 3 59.54876345444136 4 62.30385745237168 5 61.78836837363551 6 63.857445519822974 7 63.477835441899586 8 61.99105815805272 9 63.27969606270335 10-14 62.42690652181674 15-19 62.715244756392906 20-24 62.608406169546186 25-29 62.54675329523841 30-34 62.824583567092205 35-39 62.650082044125114 40-44 62.71953883705819 45-49 62.93451587304089 50-54 62.719290565558964 55-59 62.73393693351188 60-64 62.942603470501325 65-69 62.72493835476575 70-74 62.736075 75-79 62.92065426670641 80-84 62.7479985733444 85-89 62.74096045312153 90-94 62.98188557593715 95-99 62.79874236483663 100-101 62.79664150248389 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 13.0 1 14.0 2 16.5 3 15.0 4 12.5 5 13.5 6 18.0 7 27.5 8 44.0 9 57.0 10 74.0 11 118.0 12 158.0 13 185.0 14 220.0 15 274.0 16 328.5 17 377.5 18 447.5 19 504.5 20 552.5 21 660.0 22 786.5 23 976.5 24 1220.0 25 1417.0 26 1725.5 27 2162.5 28 2631.5 29 3153.5 30 3755.5 31 4412.5 32 5146.0 33 6049.5 34 6887.0 35 7661.5 36 8575.5 37 9470.5 38 10227.0 39 11048.0 40 11927.5 41 12746.0 42 13772.0 43 15165.5 44 16866.5 45 19113.5 46 22196.0 47 25917.5 48 30418.0 49 36006.0 50 42758.0 51 50436.5 52 58721.0 53 67992.5 54 78049.0 55 88357.5 56 99039.0 57 110024.5 58 121731.0 59 133919.5 60 146244.0 61 158627.5 62 170506.5 63 181916.0 64 192210.0 65 200512.0 66 205922.0 67 207402.5 68 204365.0 69 196398.0 70 184883.0 71 169485.0 72 149160.0 73 127054.0 74 104581.5 75 81638.0 76 60578.5 77 42699.0 78 28063.0 79 17239.0 80 9911.0 81 5367.5 82 2940.0 83 1692.5 84 1047.5 85 694.5 86 506.5 87 396.0 88 304.5 89 230.0 90 184.5 91 165.0 92 131.5 93 96.5 94 77.5 95 60.5 96 42.5 97 33.5 98 23.5 99 14.0 100 7.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.184 2 0.1335 3 0.142175 4 0.131625 5 0.13047499999999998 6 0.19535 7 0.202725 8 0.22190000000000001 9 0.20309999999999997 10-14 0.145845 15-19 0.11313000000000001 20-24 0.076605 25-29 0.08993 30-34 0.12857000000000002 35-39 0.093395 40-44 0.054415 45-49 0.065935 50-54 0.060110000000000004 55-59 0.07403 60-64 0.002055 65-69 3.8E-4 70-74 0.0 75-79 0.016615 80-84 0.031935 85-89 0.005635 90-94 0.002065 95-99 0.025060000000000002 100-101 0.028212499999999998 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.20340643304081168 #Duplication Level Relative count 1 100.0 2 0.15424293261887473 3 5.007887422690737E-4 4 0.0 5 5.007887422690737E-4 6 0.0 7 0.0010015774845381475 8 5.007887422690737E-4 9 0.0 10++ 0.0010015774845381475 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position TTTTT 286430 3.299561 3.5351408 80-84 AAAAA 290535 3.2759292 3.757469 60-64 GATCG 1280125 3.0737314 4.194051 1 CGATC 1271690 3.0673184 3.4976137 1 >>END_MODULE