##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002002_Airport_GTGGCC_L002_R2_003.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 62 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.6879935 34.0 31.0 34.0 31.0 34.0 2 32.8505625 34.0 31.0 34.0 31.0 34.0 3 32.89072375 34.0 33.0 34.0 31.0 34.0 4 36.26597475 37.0 37.0 37.0 35.0 37.0 5 36.2703765 37.0 37.0 37.0 35.0 37.0 6 36.244206 37.0 37.0 37.0 35.0 37.0 7 36.226677 37.0 37.0 37.0 35.0 37.0 8 36.21336125 37.0 37.0 37.0 35.0 37.0 9 37.98683225 39.0 39.0 39.0 37.0 39.0 10-14 38.2816485 39.4 39.2 39.4 37.0 39.4 15-19 39.43488035 41.0 40.0 41.0 37.0 41.0 20-24 39.21012935 41.0 39.2 41.0 36.2 41.0 25-29 38.7918306 40.4 38.6 41.0 35.0 41.0 30-34 38.06517375 40.0 37.2 41.0 33.8 41.0 35-39 37.024918050000004 38.6 35.0 40.8 32.8 41.0 40-44 35.9559148 36.4 35.0 39.8 31.6 41.0 45-49 35.02139519999999 35.0 35.0 38.4 31.0 41.0 50-54 33.73020345 34.8 33.4 35.4 29.2 39.2 55-59 33.91690594999999 35.0 35.0 35.0 31.0 38.0 60-64 33.54240595 35.0 34.6 35.0 30.6 36.2 65-69 33.191993350000004 35.0 34.0 35.0 29.6 35.0 70-74 32.9089387 35.0 33.8 35.0 29.0 35.0 75-79 32.605899150000006 35.0 33.0 35.0 28.2 35.0 80-84 32.276766550000005 35.0 33.0 35.0 27.0 35.0 85-89 31.893622849999996 35.0 33.0 35.0 26.2 35.0 90-94 31.4911758 35.0 33.0 35.0 24.2 35.0 95-99 30.849379199999998 35.0 32.4 35.0 22.0 35.0 100-101 29.635733875 34.0 30.5 35.0 10.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 5714.0 3 1118.0 4 1861.0 5 2188.0 6 2738.0 7 3368.0 8 4025.0 9 4459.0 10 4806.0 11 4996.0 12 5170.0 13 5316.0 14 5383.0 15 5755.0 16 6066.0 17 6642.0 18 7700.0 19 8551.0 20 9868.0 21 11843.0 22 13908.0 23 16797.0 24 20143.0 25 24157.0 26 29581.0 27 35703.0 28 43529.0 29 54069.0 30 67954.0 31 87005.0 32 116383.0 33 166401.0 34 278450.0 35 680177.0 36 1401067.0 37 706153.0 38 131529.0 39 19334.0 40 93.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 34.430781644549654 19.00279508479793 17.57174472543883 28.99467854521358 2 32.17833924320298 22.673326699329458 19.495011482699866 25.653322574767696 3 29.824161361755124 20.366004479879216 20.110247379540983 29.69958677882467 4 31.738224800424796 18.90380402768804 18.79765419376924 30.560316978117918 5 31.688256836108547 19.099618372945613 19.118959948676014 30.093164842269825 6 31.034038225323297 18.37689689155474 17.784465208187157 32.804599674934806 7 32.83718780599125 18.238987569698097 18.294468141358287 30.629356482952367 8 30.390842735237953 18.95796141462349 19.051805145651883 31.59939070448667 9 31.09117397858581 17.96510845970958 18.794381749225415 32.149335812479194 10-14 31.191183385589742 18.811001298548224 18.79855385421575 31.199261461646284 15-19 31.26907970117707 18.59530664309001 18.692476288189614 31.443137367543304 20-24 31.18997941140087 18.66619452467018 18.74058740260258 31.40323866132637 25-29 31.30584231467412 18.776075798432064 18.66645306802808 31.251628818865733 30-34 31.37922932272033 18.60202109171983 18.580036057857725 31.438713527702117 35-39 31.276394853907703 18.678907108723834 18.683474462738094 31.361223574630365 40-44 31.399614330283015 18.690830780508993 18.607368380405273 31.302186508802716 45-49 31.45836797553121 18.54511520630163 18.539899185265515 31.45661763290164 50-54 31.299265847954317 18.64394656194234 18.64160062873011 31.41518696137323 55-59 31.385591596958207 18.699683266223097 18.59065049351373 31.324074643304968 60-64 31.46963017570414 18.560749848599876 18.497849798279837 31.471770177416143 65-69 31.305159999999997 18.674995 18.636905000000002 31.382939999999998 70-74 31.419455000000003 18.694545 18.590065 31.295935000000004 75-79 31.470136125493188 18.56604560037514 18.500712483985485 31.46310579014619 80-84 31.347718763372644 18.64820100119777 18.620059377426077 31.38402085800351 85-89 31.445026034554672 18.68240923305939 18.57336400406441 31.29920072832153 90-94 31.545309999999997 18.554434999999998 18.45252 31.447734999999998 95-99 31.41146831286989 18.629213879821037 18.588719208760732 31.370598598548344 100-101 31.583240645162174 18.723027242133842 18.505326199646632 31.18840591305735 >>END_MODULE >>Per base GC content pass #Base %GC 1 63.425460189763236 2 57.831661817970684 3 59.523748140579805 4 62.29854177854271 5 61.781421678378365 6 63.8386379002581 7 63.466544288943616 8 61.990233439724626 9 63.240509791065 10-14 62.390444847236026 15-19 62.71221706872038 20-24 62.59321807272724 25-29 62.557471133539856 30-34 62.81794285042245 35-39 62.63761842853807 40-44 62.70180083908573 45-49 62.91498560843285 50-54 62.71445280932755 55-59 62.709666240263175 60-64 62.94140035312028 65-69 62.688100000000006 70-74 62.715390000000006 75-79 62.93324191563937 80-84 62.73173962137615 85-89 62.744226762876195 90-94 62.993045 95-99 62.782066911418234 100-101 62.77164655821953 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 36.0 1 24.5 2 9.0 3 6.5 4 9.0 5 13.5 6 18.0 7 22.0 8 26.0 9 27.5 10 40.5 11 62.5 12 81.5 13 102.5 14 139.5 15 160.0 16 184.5 17 260.5 18 349.0 19 408.5 20 497.0 21 599.0 22 740.5 23 918.0 24 1150.5 25 1450.5 26 1757.5 27 2102.0 28 2542.5 29 3151.0 30 3815.0 31 4469.5 32 5229.5 33 6138.0 34 6969.5 35 7663.0 36 8445.0 37 9349.0 38 10271.5 39 10983.5 40 11804.0 41 12859.5 42 13846.0 43 15206.5 44 17048.5 45 19209.0 46 22118.5 47 25923.5 48 30541.5 49 36226.0 50 43038.0 51 50298.5 52 58418.0 53 68003.5 54 78088.0 55 88626.0 56 99366.0 57 110309.0 58 121868.0 59 133773.5 60 146362.5 61 158917.5 62 170820.5 63 182356.5 64 192792.5 65 200767.5 66 205966.0 67 207613.5 68 204606.5 69 197063.5 70 184986.0 71 168254.0 72 148671.5 73 126917.0 74 103740.5 75 81335.0 76 60434.0 77 42372.5 78 27856.0 79 17054.5 80 9831.0 81 5448.5 82 3055.0 83 1743.0 84 1087.0 85 771.0 86 561.0 87 397.5 88 304.5 89 266.5 90 199.5 91 149.0 92 119.5 93 94.0 94 78.5 95 63.5 96 57.5 97 46.0 98 30.0 99 19.5 100 10.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.172975 2 0.1106 3 0.120075 4 0.09405000000000001 5 0.0857 6 0.127725 7 0.145225 8 0.1798 9 0.180675 10-14 0.099975 15-19 0.081965 20-24 0.044195 25-29 0.061785 30-34 0.091125 35-39 0.051539999999999996 40-44 0.03882 45-49 0.019575 50-54 0.03978 55-59 0.043815 60-64 7.999999999999999E-5 65-69 0.0 70-74 0.0 75-79 0.00477 80-84 0.00577 85-89 2.0999999999999998E-4 90-94 0.0 95-99 0.011535 100-101 0.0119625 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.1934400335895829 #Duplication Level Relative count 1 100.0 2 0.15525228496306498 3 0.004006510579692 4 0.0 5 5.008138224615E-4 6 0.0 7 0.0 8 0.001001627644923 9 0.0 10++ 0.002003255289846 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position AAAAA 298840 3.3595996 3.8777385 60-64 TTTTT 283485 3.264743 3.544263 10-14 GATCG 1285460 3.0863354 4.1199155 1 CGATC 1275445 3.0747862 3.5098486 6 >>END_MODULE