##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002002_Airport_GTGGCC_L002_R2_002.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 62 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.48871075 34.0 31.0 34.0 31.0 34.0 2 32.647461 34.0 31.0 34.0 31.0 34.0 3 32.70242775 34.0 31.0 34.0 31.0 34.0 4 36.09826975 37.0 37.0 37.0 35.0 37.0 5 36.11467475 37.0 37.0 37.0 35.0 37.0 6 36.09901075 37.0 37.0 37.0 35.0 37.0 7 36.09901975 37.0 37.0 37.0 35.0 37.0 8 36.0718775 37.0 37.0 37.0 35.0 37.0 9 37.8279515 39.0 38.0 39.0 35.0 39.0 10-14 38.1242823 39.4 38.2 39.4 35.2 39.4 15-19 39.261116699999995 41.0 39.0 41.0 36.0 41.0 20-24 39.051960550000004 41.0 39.0 41.0 35.4 41.0 25-29 38.657222749999995 40.2 38.2 41.0 34.8 41.0 30-34 37.952336349999996 40.0 37.0 41.0 33.4 41.0 35-39 36.9354242 38.6 35.0 40.6 32.4 41.0 40-44 35.9145352 36.4 35.0 39.8 31.2 41.0 45-49 35.00892785 35.0 34.8 38.4 30.8 40.8 50-54 33.71983085 34.8 33.4 35.4 28.6 39.2 55-59 33.90895805 35.0 35.0 35.0 31.0 38.0 60-64 33.57454145 35.0 34.0 35.0 30.0 36.2 65-69 33.2869368 35.0 34.0 35.0 30.0 35.0 70-74 33.0434073 35.0 34.0 35.0 29.0 35.0 75-79 32.800248599999996 35.0 33.0 35.0 29.0 35.0 80-84 32.530775600000005 35.0 33.0 35.0 27.6 35.0 85-89 32.2732806 35.0 33.0 35.0 27.0 35.0 90-94 31.928468700000003 35.0 33.0 35.0 26.6 35.0 95-99 31.391912 35.0 33.0 35.0 24.2 35.0 100-101 30.3398855 34.0 31.5 35.0 21.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 3102.0 3 939.0 4 1325.0 5 1743.0 6 2181.0 7 2868.0 8 3639.0 9 4041.0 10 4338.0 11 4613.0 12 4635.0 13 4675.0 14 4647.0 15 4777.0 16 5209.0 17 5827.0 18 6527.0 19 7698.0 20 9146.0 21 11089.0 22 13281.0 23 16492.0 24 20689.0 25 24990.0 26 30644.0 27 37825.0 28 46437.0 29 57746.0 30 72761.0 31 92969.0 32 121830.0 33 169861.0 34 272782.0 35 651763.0 36 1414005.0 37 714035.0 38 129491.0 39 19269.0 40 111.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 34.407987658896715 19.063423454106523 17.56653878131605 28.962050105680714 2 32.14491803754759 22.68915052406451 19.48906120014991 25.676870238238 3 29.779801201839806 20.31911730252843 20.125510361412974 29.775571134218794 4 31.710019857435974 18.953475827270093 18.782260824029777 30.554243491264156 5 31.625227220780367 19.124873606289505 19.162801107432966 30.087098065497166 6 30.98123099916269 18.409441721762217 17.793687045267884 32.81564023380721 7 32.889931755126874 18.262757268964442 18.269835886137816 30.57747508977087 8 30.333197820961054 18.99253848030171 19.116150781489427 31.558112917247804 9 31.0421640374478 17.936734686732063 18.822010911020712 32.199090364799424 10-14 31.206495504542765 18.827490263188807 18.791416794724814 31.17459743754362 15-19 31.269213743959217 18.596891620421346 18.705363350545444 31.428531285073998 20-24 31.21741716957944 18.64965525731039 18.744775309626423 31.388152263483743 25-29 31.291170079008353 18.776076070900814 18.67578935599799 31.25696449409285 30-34 31.394942225255875 18.62303213958448 18.582087891618755 31.39993774354089 35-39 31.271799590815952 18.69972012722926 18.684149973084736 31.344330308870056 40-44 31.40697582906858 18.708309320802115 18.599944179927434 31.284770670201873 45-49 31.45421 18.566959999999998 18.52555 31.45328 50-54 31.307923831093365 18.66722613411659 18.655241117337564 31.369608917452485 55-59 31.396646636861796 18.703354053142967 18.61856846812243 31.281430841872808 60-64 31.447705 18.584855 18.52101 31.446429999999996 65-69 31.310765 18.69236 18.65469 31.342185 70-74 31.378155000000003 18.725825 18.616979999999998 31.279040000000002 75-79 31.451269999999997 18.588625 18.53217 31.427935 80-84 31.328875 18.675815 18.655505 31.339805 85-89 31.41704 18.709415 18.600505000000002 31.27304 90-94 31.472305 18.58716 18.515785 31.424750000000003 95-99 31.365399999999998 18.671065000000002 18.616435 31.3471 100-101 31.5540625 18.759562499999998 18.5360375 31.150337500000003 >>END_MODULE >>Per base GC content pass #Base %GC 1 63.370037764577425 2 57.82178827578558 3 59.555372336058596 4 62.26426334870013 5 61.712325286277526 6 63.7968712329699 7 63.467406844897745 8 61.89131073820886 9 63.24125440224723 10-14 62.38109294208638 15-19 62.697745029033214 20-24 62.60556943306319 25-29 62.5481345731012 30-34 62.79487996879676 35-39 62.616129899686 40-44 62.69174649927045 45-49 62.907489999999996 50-54 62.67753274854585 55-59 62.67807747873461 60-64 62.894135 65-69 62.65295 70-74 62.657195 75-79 62.879205000000006 80-84 62.66868 85-89 62.69008 90-94 62.897055 95-99 62.712500000000006 100-101 62.70440000000001 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 20.0 1 15.5 2 8.5 3 11.5 4 14.5 5 10.5 6 12.5 7 17.5 8 19.0 9 26.5 10 41.0 11 53.0 12 65.5 13 85.5 14 102.5 15 124.5 16 163.5 17 214.0 18 273.0 19 327.0 20 398.5 21 499.5 22 637.5 23 814.0 24 1006.0 25 1272.5 26 1622.5 27 1995.0 28 2449.5 29 3029.5 30 3676.5 31 4389.5 32 5222.0 33 6056.0 34 6812.5 35 7673.5 36 8423.5 37 9146.0 38 10091.5 39 10946.0 40 11829.5 41 12757.0 42 13774.5 43 15176.5 44 17000.5 45 19299.5 46 22269.5 47 25861.0 48 30348.0 49 36288.0 50 42939.0 51 50266.0 52 58823.5 53 68252.0 54 78007.0 55 88188.0 56 99345.0 57 110622.0 58 122187.5 59 134538.0 60 147170.5 61 159687.5 62 171615.5 63 183205.0 64 193864.0 65 202055.0 66 207532.5 67 208423.5 68 204681.5 69 197470.5 70 185659.5 71 168973.0 72 148770.5 73 126912.5 74 103986.5 75 81147.0 76 59762.0 77 41443.0 78 26973.5 79 16168.0 80 8928.5 81 4617.5 82 2306.0 83 1166.5 84 624.5 85 373.0 86 247.0 87 174.0 88 143.0 89 110.5 90 73.5 91 55.5 92 47.5 93 38.5 94 25.5 95 13.5 96 8.5 97 8.0 98 5.5 99 3.0 100 0.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.17099999999999999 2 0.13872500000000001 3 0.1198 4 0.125575 5 0.13842500000000002 6 0.0373 7 0.05109999999999999 8 0.070625 9 0.03685 10-14 0.009615 15-19 0.001595 20-24 5.5E-5 25-29 0.00171 30-34 0.010375 35-39 9.9E-4 40-44 1.3000000000000002E-4 45-49 0.0 50-54 1.4E-4 55-59 6.9E-4 60-64 0.0 65-69 0.0 70-74 0.0 75-79 0.0 80-84 0.0 85-89 0.0 90-94 0.0 95-99 0.0 100-101 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.19792775636892765 #Duplication Level Relative count 1 100.0 2 0.1587563915723894 3 5.008088062220486E-4 4 0.0 5 5.008088062220486E-4 6 0.0 7 0.0 8 5.008088062220486E-4 9 5.008088062220486E-4 10++ 0.0010016176124440972 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position AAAAA 291485 3.26043 3.7761602 1 TTTTT 276690 3.1663527 3.6132877 10-14 GATCG 1284895 3.0821102 4.1293445 1 CGATC 1273575 3.0690858 3.5104914 1 >>END_MODULE