##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002002_Airport_GTGGCC_L002_R2_001.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 62 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.54935975 34.0 31.0 34.0 31.0 34.0 2 32.70141425 34.0 31.0 34.0 31.0 34.0 3 32.74871525 34.0 31.0 34.0 31.0 34.0 4 36.1380655 37.0 37.0 37.0 35.0 37.0 5 36.12769725 37.0 37.0 37.0 35.0 37.0 6 36.13012575 37.0 37.0 37.0 35.0 37.0 7 36.130504 37.0 37.0 37.0 35.0 37.0 8 36.113149 37.0 37.0 37.0 35.0 37.0 9 37.89272125 39.0 39.0 39.0 35.0 39.0 10-14 38.17865515 39.4 38.6 39.4 35.4 39.4 15-19 39.30861135 41.0 39.6 41.0 36.4 41.0 20-24 39.079982 41.0 39.0 41.0 35.6 41.0 25-29 38.68631860000001 40.2 38.4 41.0 35.0 41.0 30-34 37.951281 40.0 37.0 41.0 33.4 41.0 35-39 36.923644550000006 38.6 35.0 40.8 32.6 41.0 40-44 35.8387835 36.4 35.0 39.8 31.2 41.0 45-49 34.88034915000001 35.0 34.6 38.4 30.4 40.8 50-54 33.604226399999995 34.8 33.0 35.4 28.6 39.2 55-59 33.825260099999994 35.0 34.8 35.0 30.6 38.0 60-64 33.444747050000004 35.0 34.0 35.0 30.0 36.2 65-69 33.1261941 35.0 34.0 35.0 29.2 35.0 70-74 32.85215125 35.0 33.4 35.0 29.0 35.0 75-79 32.55015565 35.0 33.0 35.0 27.8 35.0 80-84 32.218451050000006 35.0 33.0 35.0 27.0 35.0 85-89 31.8916182 35.0 33.0 35.0 26.2 35.0 90-94 31.4688643 35.0 33.0 35.0 24.2 35.0 95-99 30.8480114 35.0 32.4 35.0 22.0 35.0 100-101 29.7162625 34.0 30.5 35.0 10.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 4815.0 3 1164.0 4 1640.0 5 2167.0 6 2808.0 7 3429.0 8 4060.0 9 4550.0 10 5038.0 11 5317.0 12 5492.0 13 5602.0 14 5648.0 15 5736.0 16 6301.0 17 6917.0 18 7900.0 19 9083.0 20 10345.0 21 12266.0 22 14720.0 23 17826.0 24 21339.0 25 26031.0 26 31790.0 27 38832.0 28 47343.0 29 58972.0 30 73629.0 31 94015.0 32 123936.0 33 174684.0 34 282523.0 35 662436.0 36 1371479.0 37 700797.0 38 129819.0 39 19435.0 40 116.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 34.404778825884655 19.03480913098879 17.57387699521972 28.98653504790683 2 32.094598911789284 22.70644494864011 19.479598241523647 25.719357898046958 3 29.77856199076749 20.403197157191723 20.147381490780766 29.67085936126002 4 31.7375416988712 18.962398046807962 18.77682476014145 30.523235494179385 5 31.62897637353331 19.164669647412094 19.116635947148396 30.089718031906205 6 31.022654141302585 18.410898458493104 17.783987782688655 32.782459617515656 7 32.86543303622954 18.291774603696787 18.26333355615492 30.579458803918758 8 30.33634376119771 18.98317367223204 19.09870959842126 31.58177296814899 9 31.035901779807322 17.943330422182022 18.841306708939687 32.17946108907096 10-14 31.179460372805874 18.832336838068255 18.797868465427317 31.190334323698554 15-19 31.23641698117427 18.59880203033191 18.73097701981219 31.433803968681634 20-24 31.189721675045117 18.674461260477983 18.769867296785293 31.365949767691603 25-29 31.277162705087974 18.780369128968484 18.68184958282356 31.260618583119985 30-34 31.36310126262462 18.623940787673238 18.601472003073884 31.411485946628254 35-39 31.271691102003256 18.693540118880016 18.676525822770248 31.358242956346476 40-44 31.38548659771677 18.70233307848133 18.61976663064334 31.292413693158554 45-49 31.430291114961033 18.568671315677456 18.53963937489221 31.461398194469297 50-54 31.30552138931606 18.669323357441474 18.667158120456286 31.357997132786185 55-59 31.390631737475704 18.69281513778073 18.615866492600443 31.300686632143123 60-64 31.4413 18.565715 18.530155 31.462830000000004 65-69 31.29794 18.678815 18.64421 31.379035 70-74 31.3884 18.73247 18.58804 31.29109 75-79 31.458236624825926 18.584848452727215 18.517893332208 31.439021590238863 80-84 31.33592753826892 18.681950684905203 18.63862893254032 31.343492844285553 85-89 31.45233 18.717344999999998 18.565955000000002 31.264370000000003 90-94 31.501344999999997 18.565994999999997 18.49824 31.434420000000003 95-99 31.382127650553095 18.650907699621616 18.598102139882684 31.36886250994261 100-101 31.592160572562005 18.77061569715494 18.495439734039067 31.141783996243987 >>END_MODULE >>Per base GC content pass #Base %GC 1 63.39131387379149 2 57.81395680983624 3 59.44942135202751 4 62.260777193050586 5 61.718694405439514 6 63.805113758818244 7 63.4448918401483 8 61.91811672934671 9 63.21536286887829 10-14 62.369794696504435 15-19 62.6702209498559 20-24 62.555671442736724 25-29 62.53778128820796 30-34 62.77458720925287 35-39 62.62993405834973 40-44 62.677900290875336 45-49 62.89168930943033 50-54 62.663518522102244 55-59 62.691318369618834 60-64 62.90413 65-69 62.676975 70-74 62.67949 75-79 62.89725821506479 80-84 62.679420382554476 85-89 62.7167 90-94 62.935764999999996 95-99 62.750990160495704 100-101 62.73394456880599 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 11.0 1 9.0 2 7.5 3 8.0 4 11.0 5 13.5 6 15.0 7 17.0 8 21.5 9 29.5 10 38.5 11 55.5 12 68.5 13 78.0 14 105.0 15 143.5 16 172.0 17 210.0 18 285.0 19 357.0 20 435.5 21 550.5 22 696.5 23 880.5 24 1093.0 25 1365.5 26 1727.0 27 2116.0 28 2610.0 29 3175.0 30 3789.5 31 4536.5 32 5311.0 33 6130.0 34 6943.5 35 7820.0 36 8793.5 37 9625.0 38 10389.0 39 11185.5 40 12104.5 41 13092.5 42 14081.5 43 15454.5 44 17082.0 45 19309.5 46 22233.0 47 25809.0 48 30555.0 49 36327.5 50 43147.0 51 50652.5 52 59093.5 53 68425.5 54 78163.0 55 88509.5 56 99436.0 57 110396.5 58 121933.5 59 134218.5 60 146689.5 61 159202.5 62 171542.0 63 183095.5 64 192784.0 65 200438.0 66 205292.0 67 206912.5 68 204327.5 69 196238.0 70 184161.0 71 168411.0 72 148421.0 73 126486.0 74 103592.5 75 80744.0 76 60224.0 77 42280.5 78 27540.5 79 17006.0 80 9890.5 81 5371.5 82 2930.5 83 1671.0 84 1034.5 85 725.5 86 510.0 87 362.5 88 282.5 89 228.0 90 173.5 91 126.5 92 113.5 93 98.5 94 75.0 95 63.5 96 47.5 97 29.5 98 17.5 99 5.5 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.272575 2 0.226125 3 0.21134999999999998 4 0.214625 5 0.22629999999999997 6 0.125325 7 0.144325 8 0.160925 9 0.12542499999999998 10-14 0.082315 15-19 0.056735 20-24 0.027290000000000002 25-29 0.024915 30-34 0.06135 35-39 0.02525 40-44 0.013865 45-49 0.006685 50-54 0.010945 55-59 0.011234999999999998 60-64 0.0 65-69 0.0 70-74 0.0 75-79 1.7999999999999998E-4 80-84 0.004045 85-89 0.0 90-94 0.0 95-99 0.00106 100-101 3.5E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.24087233766104327 #Duplication Level Relative count 1 100.0 2 0.17783432853765077 3 0.004508475934757344 4 0.0010018835410571874 5 0.0015028253115857812 6 5.009417705285937E-4 7 5.009417705285937E-4 8 0.0 9 0.0010018835410571874 10++ 0.0015028253115857812 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position AAAAA 294670 3.301703 3.7582595 1 TTTTT 284985 3.2665288 3.5544598 95-97 GATCG 1283775 3.0815408 4.213491 1 CGATC 1274605 3.0717685 3.5508666 1 >>END_MODULE