##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002002_Airport_GTGGCC_L002_R1_013.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 62 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.54394175 34.0 31.0 34.0 31.0 34.0 2 32.82638375 34.0 31.0 34.0 31.0 34.0 3 32.883513 34.0 31.0 34.0 31.0 34.0 4 36.34033225 37.0 37.0 37.0 35.0 37.0 5 36.2511775 37.0 37.0 37.0 35.0 37.0 6 36.22458925 37.0 37.0 37.0 35.0 37.0 7 36.22998875 37.0 37.0 37.0 35.0 37.0 8 36.2077935 37.0 37.0 37.0 35.0 37.0 9 37.9740065 39.0 38.0 39.0 35.0 39.0 10-14 38.22551095 39.4 38.2 39.4 35.2 39.4 15-19 39.34315845 41.0 39.0 41.0 36.0 41.0 20-24 39.096350099999995 40.4 38.8 41.0 35.4 41.0 25-29 38.559368649999996 40.0 38.0 41.0 34.4 41.0 30-34 37.496846350000006 39.6 36.2 41.0 32.2 41.0 35-39 36.74963735 38.2 35.0 40.4 31.8 41.0 40-44 35.8016118 36.2 35.0 39.8 31.0 41.0 45-49 35.03582085000001 35.0 34.8 38.4 30.4 40.8 50-54 34.083486300000004 35.0 34.0 36.0 29.4 39.6 55-59 33.366353450000005 35.0 33.0 35.0 28.0 37.6 60-64 33.18702945 35.0 33.0 35.0 28.6 36.0 65-69 32.8744473 35.0 33.0 35.0 29.0 35.0 70-74 32.56677764999999 35.0 33.0 35.0 27.0 35.0 75-79 32.01052775 34.4 32.6 35.0 26.4 35.0 80-84 32.20671155 35.0 33.0 35.0 27.0 35.0 85-89 30.948491699999998 34.6 31.4 35.0 20.6 35.0 90-94 31.05315615 34.8 31.8 35.0 23.2 35.0 95-99 30.83242115 35.0 32.0 35.0 22.2 35.0 100-101 29.594801 34.0 30.5 35.0 10.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 86.0 3 25.0 4 44.0 5 151.0 6 399.0 7 1168.0 8 2631.0 9 3819.0 10 4955.0 11 5543.0 12 5862.0 13 6190.0 14 6501.0 15 6987.0 16 7693.0 17 8369.0 18 9019.0 19 9651.0 20 10632.0 21 12319.0 22 14810.0 23 18064.0 24 23046.0 25 28763.0 26 36075.0 27 44492.0 28 55071.0 29 67289.0 30 83752.0 31 105979.0 32 138255.0 33 193853.0 34 331503.0 35 781010.0 36 1316946.0 37 552638.0 38 96575.0 39 9807.0 40 28.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 34.67403418787179 19.134837938367426 18.034259873626777 28.156868000134004 2 31.393975 22.447400000000002 20.507649999999998 25.650975 3 29.20205 20.57715 20.997275000000002 29.223525 4 31.24755 19.474525 19.50195 29.775975 5 31.439525000000003 19.21405 19.345075 30.00135 6 30.78965 18.562375 18.075825000000002 32.57215 7 32.64265 18.513450000000002 18.442700000000002 30.4012 8 30.26775 19.033549999999998 19.204925 31.493775000000003 9 30.927500000000002 18.060499999999998 18.990425 32.021575 10-14 31.101025 18.869754999999998 18.94033 31.088890000000003 15-19 31.199424999999998 18.622105 18.7683 31.410169999999997 20-24 31.12041058586691 18.686337239246072 18.804904708996666 31.388347465890355 25-29 31.310982660115616 18.7754655098577 18.758150375665412 31.15540145436127 30-34 31.620130987416616 18.590274237108112 18.568506885263588 31.22108789021168 35-39 31.251249772302614 18.686965586359904 18.73249506017963 31.32928958115785 40-44 31.41365731301269 18.712263991947918 18.634822814485947 31.239255880553447 45-49 31.603415000000002 18.584345 18.53175 31.28049 50-54 31.363666272733255 18.654548730909745 18.652553730510746 31.329231265846254 55-59 31.524035 18.734645 18.6085 31.13282 60-64 31.433449286882176 18.575891536044324 18.559375080944633 31.43128409612887 65-69 31.29597215850352 18.65099249084638 18.68416427382972 31.368871076820383 70-74 31.396185 18.708155 18.6396 31.25606 75-79 31.461295 18.567835 18.549275 31.421595000000003 80-84 31.32657578580915 18.628804120488653 18.669539206032333 31.375080887669863 85-89 31.429499861274383 18.72544832824506 18.60326778454164 31.24178402593892 90-94 31.492502563751763 18.544716091120147 18.535470183171988 31.427311161956105 95-99 31.373535000000004 18.627805 18.63051 31.36815 100-101 31.63165 18.6811125 18.548087499999998 31.139149999999997 >>END_MODULE >>Per base GC content warn #Base %GC 1 62.8309021880058 2 57.04495000000001 3 58.425574999999995 4 61.023525 5 61.44087499999999 6 63.3618 7 63.04385 8 61.76152499999999 9 62.949075 10-14 62.189915 15-19 62.609595 20-24 62.50875805175726 25-29 62.466384114476895 30-34 62.8412188776283 35-39 62.580539353460466 40-44 62.65291319356614 45-49 62.883905 50-54 62.69289753857951 55-59 62.656855 60-64 62.86473338301104 65-69 62.6648432353239 70-74 62.65224499999999 75-79 62.88289 80-84 62.701656673479015 85-89 62.671283887213306 90-94 62.91981372570786 95-99 62.741685000000004 100-101 62.7708 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 6.0 1 7.0 2 6.5 3 7.5 4 8.5 5 7.0 6 11.0 7 14.5 8 17.5 9 22.5 10 37.0 11 48.0 12 50.0 13 75.5 14 100.0 15 130.0 16 179.5 17 222.0 18 282.5 19 343.0 20 411.0 21 511.0 22 626.5 23 791.0 24 1046.5 25 1285.0 26 1602.0 27 2037.5 28 2514.5 29 3055.0 30 3634.0 31 4310.5 32 5075.0 33 5967.0 34 6876.5 35 7718.0 36 8550.0 37 9390.0 38 10192.5 39 11068.0 40 11939.5 41 12943.5 42 14151.0 43 15508.0 44 17387.5 45 19727.5 46 22429.5 47 26128.5 48 30919.5 49 36725.0 50 43699.0 51 51377.0 52 59777.5 53 69368.5 54 79665.5 55 89920.5 56 101041.5 57 112425.0 58 123440.0 59 135361.5 60 147771.0 61 159916.5 62 172013.5 63 183426.0 64 193400.0 65 201027.5 66 205841.0 67 206840.5 68 203739.0 69 195828.5 70 182796.0 71 166943.5 72 147388.0 73 125187.0 74 102415.5 75 79807.0 76 59401.0 77 41588.5 78 26938.0 79 16164.0 80 8952.0 81 4716.5 82 2431.0 83 1250.5 84 683.0 85 417.0 86 274.0 87 180.5 88 132.0 89 114.0 90 86.5 91 54.0 92 36.0 93 26.5 94 20.0 95 14.0 96 6.5 97 3.0 98 1.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.00255 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-14 0.0 15-19 0.0 20-24 0.0063 25-29 7.750000000000001E-4 30-34 0.07971500000000001 35-39 0.03179 40-44 0.020890000000000002 45-49 0.0 50-54 1.9999999999999998E-5 55-59 0.0 60-64 0.00881 65-69 0.005375 70-74 0.0 75-79 0.0 80-84 2.0999999999999998E-4 85-89 4.45E-4 90-94 0.00982 95-99 0.0 100-101 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.16045667669728864 #Duplication Level Relative count 1 100.0 2 0.12917244521436116 3 0.0015020051769111765 4 0.0010013367846074509 5 0.0 6 5.006683923037254E-4 7 5.006683923037254E-4 8 0.0 9 0.0 10++ 0.0010013367846074509 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position TTTTT 288270 3.242087 3.6225927 90-94 AAAAA 290250 3.2370956 3.6072075 1 GATCG 1276900 3.0583155 4.313495 1 CGATC 1264790 3.0504148 3.397415 1 >>END_MODULE