##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002002_Airport_GTGGCC_L002_R1_012.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 62 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.80685625 34.0 31.0 34.0 31.0 34.0 2 33.03249275 34.0 31.0 34.0 31.0 34.0 3 33.08065825 34.0 33.0 34.0 31.0 34.0 4 36.46622125 37.0 37.0 37.0 35.0 37.0 5 36.40942875 37.0 37.0 37.0 35.0 37.0 6 36.38463375 37.0 37.0 37.0 35.0 37.0 7 36.376866 37.0 37.0 37.0 35.0 37.0 8 36.3669825 37.0 37.0 37.0 35.0 37.0 9 38.168161 39.0 39.0 39.0 37.0 39.0 10-14 38.4237481 39.4 39.2 39.4 37.0 39.4 15-19 39.584420249999994 41.0 40.0 41.0 37.0 41.0 20-24 39.32501014999999 41.0 39.2 41.0 36.2 41.0 25-29 38.70377979999999 40.0 38.4 41.0 34.6 41.0 30-34 37.533234650000004 39.8 36.6 41.0 32.6 41.0 35-39 36.83152435 38.6 35.0 40.4 32.0 41.0 40-44 35.9858184 36.6 35.0 40.0 31.6 41.0 45-49 35.264421350000006 35.0 35.0 38.4 31.6 41.0 50-54 34.341186 35.0 34.8 36.2 30.8 39.6 55-59 33.58359 35.0 34.0 35.0 29.6 38.0 60-64 33.11022810000001 35.0 33.2 35.0 28.4 36.2 65-69 32.650387699999996 35.0 33.0 35.0 27.6 35.0 70-74 32.273239700000005 35.0 33.0 35.0 26.2 35.0 75-79 31.787834350000004 34.4 32.4 35.0 26.0 35.0 80-84 31.9090581 35.0 33.0 35.0 26.6 35.0 85-89 31.513653899999998 35.0 33.0 35.0 24.2 35.0 90-94 30.98969255 35.0 32.4 35.0 22.8 35.0 95-99 30.296230149999996 34.8 31.4 35.0 15.0 35.0 100-101 28.7258425 33.5 29.0 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 93.0 3 13.0 4 58.0 5 152.0 6 411.0 7 1185.0 8 2792.0 9 4564.0 10 5892.0 11 6531.0 12 6896.0 13 7086.0 14 7726.0 15 8340.0 16 8987.0 17 9793.0 18 10698.0 19 11270.0 20 12410.0 21 13679.0 22 15634.0 23 18582.0 24 22441.0 25 27540.0 26 33424.0 27 41331.0 28 50679.0 29 62780.0 30 77866.0 31 98946.0 32 130558.0 33 185568.0 34 311391.0 35 729100.0 36 1322674.0 37 623526.0 38 116027.0 39 13316.0 40 41.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 34.65723366430842 18.996254749063688 17.91612947903237 28.430382107595527 2 31.573600000000003 22.324975 20.364974999999998 25.736449999999998 3 29.253125 20.4742 20.91895 29.353725000000004 4 31.35035 19.354325 19.41885 29.876475000000003 5 31.472250000000003 19.1573 19.377225 29.993225000000002 6 30.822100000000002 18.5777 18.083550000000002 32.516650000000006 7 32.61285 18.480925 18.460350000000002 30.445875 8 30.296975 18.9849 19.223425 31.494699999999998 9 30.914724999999997 18.05855 19.01085 32.015875 10-14 31.108355 18.882345 18.90222 31.107079999999996 15-19 31.18763 18.6211 18.775095 31.416175000000003 20-24 31.14299540996906 18.65773022234903 18.804425799100116 31.394848568581796 25-29 31.394231038463477 18.7789052081175 18.691924581856988 31.13493917156204 30-34 31.761418544937175 18.562651674130105 18.517339590721047 31.158590190211672 35-39 31.270415799852213 18.67459689564306 18.700470037920933 31.35451726658379 40-44 31.371455440766187 18.706542577266543 18.631967520820183 31.290034461147087 45-49 31.432745 18.529925 18.57877 31.458560000000002 50-54 31.366041458874626 18.61466350639431 18.66116359009446 31.3581314446366 55-59 31.453874999999996 18.66808 18.61163 31.266415 60-64 31.46527807610266 18.50179769253824 18.54870228218159 31.48422194917751 65-69 31.392384694502756 18.614123348593438 18.655831829166143 31.33766012773766 70-74 31.500745000000002 18.67185 18.58437 31.243035000000003 75-79 31.49073 18.517924999999998 18.529595 31.46175 80-84 31.395782500932377 18.575744937851617 18.62230503795583 31.406167523260176 85-89 31.50896020231826 18.601855727434764 18.570024742265772 31.3191593279812 90-94 31.562277950057183 18.461503225323476 18.487222200191038 31.488996624428307 95-99 31.502837326560527 18.530085191546856 18.563015209658364 31.404062272234253 100-101 31.930625000000003 18.5515125 18.425112499999997 31.092750000000002 >>END_MODULE >>Per base GC content warn #Base %GC 1 63.08761577190394 2 57.310050000000004 3 58.60685 4 61.226825 5 61.465475000000005 6 63.33875 7 63.058725 8 61.791675 9 62.930600000000005 10-14 62.215435 15-19 62.603805 20-24 62.53784397855085 25-29 62.52917021002551 30-34 62.92000873514885 35-39 62.62493306643601 40-44 62.66148990191327 45-49 62.891304999999996 50-54 62.724172903511224 55-59 62.72029 60-64 62.94950002528017 65-69 62.730044822240416 70-74 62.74378 75-79 62.95248 80-84 62.80195002419256 85-89 62.82811953029947 90-94 63.05127457448548 95-99 62.90689959879477 100-101 63.023375 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 5.0 1 3.5 2 4.0 3 4.5 4 5.0 5 10.0 6 11.0 7 14.0 8 18.5 9 23.5 10 35.0 11 51.5 12 73.0 13 87.0 14 96.0 15 118.0 16 156.5 17 185.5 18 253.0 19 348.0 20 421.0 21 512.5 22 662.5 23 823.5 24 997.5 25 1302.0 26 1650.5 27 2002.5 28 2468.0 29 3010.0 30 3672.5 31 4420.0 32 5135.5 33 5963.0 34 6768.5 35 7557.5 36 8445.5 37 9412.0 38 10267.5 39 10976.0 40 11948.5 41 13040.5 42 14086.5 43 15371.0 44 17178.0 45 19484.0 46 22510.0 47 26359.0 48 30909.0 49 36488.5 50 43548.0 51 51220.0 52 59560.0 53 69329.0 54 79311.5 55 89489.0 56 100275.5 57 111563.0 58 123539.0 59 135081.5 60 146965.0 61 159211.0 62 170722.0 63 182162.0 64 192020.5 65 199795.5 66 204883.0 67 205942.5 68 202642.5 69 194345.5 70 182423.0 71 166460.5 72 147003.0 73 125553.5 74 103155.0 75 81077.5 76 60430.5 77 42935.5 78 28635.5 79 17869.0 80 10672.5 81 6189.0 82 3554.5 83 2181.0 84 1445.0 85 994.0 86 701.0 87 496.0 88 358.5 89 280.0 90 208.5 91 142.0 92 100.0 93 75.0 94 49.5 95 31.5 96 15.5 97 6.5 98 4.5 99 2.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 2.4999999999999998E-5 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-14 0.0 15-19 0.0 20-24 0.00721 25-29 7.199999999999999E-4 30-34 0.08184000000000001 35-39 0.03147 40-44 0.013485 45-49 0.0 50-54 1.7999999999999998E-4 55-59 0.0 60-64 0.020445 65-69 0.008345 70-74 0.0 75-79 0.0 80-84 2.1500000000000002E-4 85-89 0.003095 90-94 0.015454999999999998 95-99 5.5E-5 100-101 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.169968555817171 #Duplication Level Relative count 1 100.0 2 0.1462215256113011 3 0.002003034597415084 4 5.00758649353771E-4 5 0.001001517298707542 6 5.00758649353771E-4 7 0.0 8 5.00758649353771E-4 9 0.0 10++ 0.001001517298707542 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position TTTTT 297105 3.3659048 3.7830155 95-97 AAAAA 292010 3.3025005 3.6985922 65-69 GATCG 1272690 3.0502586 4.271951 1 CGATC 1260155 3.0400758 3.5057745 1 >>END_MODULE