##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002002_Airport_GTGGCC_L002_R1_011.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 62 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.660194 34.0 31.0 34.0 31.0 34.0 2 32.923166 34.0 31.0 34.0 31.0 34.0 3 32.975908 34.0 31.0 34.0 31.0 34.0 4 36.40290925 37.0 37.0 37.0 35.0 37.0 5 36.31897425 37.0 37.0 37.0 35.0 37.0 6 36.29488675 37.0 37.0 37.0 35.0 37.0 7 36.2984565 37.0 37.0 37.0 35.0 37.0 8 36.27834275 37.0 37.0 37.0 35.0 37.0 9 38.055213 39.0 38.0 39.0 35.0 39.0 10-14 38.31372319999999 39.4 38.4 39.4 35.4 39.4 15-19 39.4227078 41.0 39.4 41.0 36.4 41.0 20-24 38.942566850000006 40.6 38.8 41.0 35.0 41.0 25-29 36.045061700000005 39.0 33.2 41.0 26.2 41.0 30-34 33.62195285 37.6 28.6 40.2 20.2 41.0 35-39 36.0969578 37.6 34.6 40.0 30.0 41.0 40-44 25.286927749999997 25.6 23.2 29.4 17.6 31.6 45-49 31.33904895 32.6 30.2 35.2 24.4 37.8 50-54 31.271576600000003 34.8 27.0 35.6 20.0 38.4 55-59 27.928841 31.8 21.8 35.0 14.0 35.6 60-64 32.72107975 35.0 33.0 35.0 26.8 35.6 65-69 32.441700250000004 35.0 33.0 35.0 27.0 35.0 70-74 30.713445450000002 34.4 30.2 35.0 20.2 35.0 75-79 30.827642899999994 34.2 30.6 35.0 20.8 35.0 80-84 31.152507149999998 34.6 31.0 35.0 23.2 35.0 85-89 31.7125337 35.0 33.0 35.0 25.8 35.0 90-94 31.4440495 35.0 33.0 35.0 24.4 35.0 95-99 30.895766400000003 35.0 32.4 35.0 23.0 35.0 100-101 29.540290375 34.0 30.5 35.0 11.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 78.0 3 25.0 4 76.0 5 174.0 6 550.0 7 1688.0 8 4591.0 9 6810.0 10 8095.0 11 10457.0 12 11839.0 13 9596.0 14 7732.0 15 7348.0 16 7526.0 17 7730.0 18 8420.0 19 9230.0 20 10341.0 21 12264.0 22 15905.0 23 21258.0 24 28845.0 25 37932.0 26 49516.0 27 62144.0 28 79359.0 29 102372.0 30 137479.0 31 200411.0 32 339833.0 33 648826.0 34 998113.0 35 799545.0 36 291414.0 37 54802.0 38 7322.0 39 353.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.64026543283513 19.15517452228917 17.999370279755343 28.205189765120352 2 31.37535 22.48795 20.452325 25.684375 3 29.113825 20.54345 21.03575 29.306975 4 31.2921 19.414875000000002 19.45595 29.837075000000002 5 31.417025 19.214225 19.386625 29.982125 6 30.771874999999998 18.556225 18.071025 32.600875 7 32.674775 18.493850000000002 18.402175 30.4292 8 30.284175 19.063475 19.1774 31.47495 9 30.903625 18.068 19.01005 32.018325 10-14 31.110235000000003 18.87833 18.92024 31.091195 15-19 31.218384999999998 18.62007 18.7669 31.394644999999997 20-24 31.55792549937189 18.62814706842954 18.695918003668453 31.118009428530115 25-29 31.716715227210546 18.594848262300538 18.491917109471625 31.19651940101729 30-34 32.161542924030506 18.66490743731267 18.37065909899754 30.802890539659288 35-39 31.481959525903214 18.761366936926052 18.637460823324297 31.11921271384644 40-44 39.510175440918196 16.898565267948264 16.398976702340168 27.192282588793372 45-49 31.528574999999996 18.66283 18.62722 31.181375 50-54 31.823103435913723 18.739662131158617 18.587506301909347 30.84972813101831 55-59 31.621831289030222 19.225167766179126 18.493546536700343 30.659454408090305 60-64 31.486055472889245 18.58699412193027 18.548671711450652 31.378278693729833 65-69 31.374502734096804 18.718598913581598 18.652705978051323 31.254192374270275 70-74 31.500745000000002 18.93078 18.53263 31.035845000000002 75-79 31.63521 18.853315000000002 18.47608 31.035394999999998 80-84 31.36579273158546 18.699007398014796 18.657582315164632 31.27761755523511 85-89 31.42560156088554 18.655591227348857 18.628056129599262 31.29075108216634 90-94 31.48444884568125 18.523399274712666 18.549661350729778 31.44249052887631 95-99 31.360284999999998 18.63284 18.640455 31.36642 100-101 31.649050000000003 18.652787500000002 18.5692875 31.128875 >>END_MODULE >>Per base GC content warn #Base %GC 1 62.84545519795548 2 57.05972499999999 3 58.42079999999999 4 61.129175000000004 5 61.399150000000006 6 63.372749999999996 7 63.103975 8 61.759125000000004 9 62.92195 10-14 62.20143 15-19 62.61303 20-24 62.67593492790201 25-29 62.91323462822783 30-34 62.964433463689794 35-39 62.60117223974966 40-44 66.70245802971158 45-49 62.709950000000006 50-54 62.67283156693204 55-59 62.28128569712052 60-64 62.86433416661909 65-69 62.62869510836708 70-74 62.536590000000004 75-79 62.670605 80-84 62.643410286820576 85-89 62.716352643051884 90-94 62.926939374557556 95-99 62.726705 100-101 62.777925 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1.0 1 2.0 2 3.5 3 3.5 4 6.0 5 7.5 6 6.0 7 6.0 8 11.5 9 19.5 10 23.5 11 30.5 12 42.5 13 54.5 14 79.0 15 116.0 16 138.0 17 157.5 18 208.0 19 269.5 20 338.0 21 429.0 22 534.5 23 675.0 24 877.5 25 1107.0 26 1385.0 27 1704.0 28 2078.0 29 2502.0 30 3136.0 31 3849.5 32 4534.0 33 5389.0 34 6214.5 35 7279.5 36 8219.5 37 8973.5 38 9912.5 39 10734.0 40 11639.0 41 12808.0 42 14011.0 43 15296.5 44 17045.0 45 19308.0 46 22057.0 47 25885.5 48 30710.0 49 36236.0 50 42981.5 51 51086.0 52 60068.0 53 69861.0 54 80406.0 55 91312.5 56 103132.0 57 115234.5 58 127046.0 59 139527.5 60 152579.5 61 165633.5 62 177814.0 63 189021.0 64 198986.0 65 206816.5 66 210919.5 67 210539.0 68 205293.0 69 195727.5 70 181815.5 71 163245.0 72 142041.0 73 119157.5 74 95909.0 75 73340.5 76 53205.5 77 36393.0 78 23221.5 79 14026.0 80 7871.0 81 4208.0 82 2251.5 83 1218.0 84 688.0 85 419.0 86 284.0 87 205.5 88 147.5 89 97.0 90 73.0 91 54.5 92 39.0 93 24.5 94 15.0 95 7.0 96 2.5 97 2.5 98 0.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.034975 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-14 0.0 15-19 0.0 20-24 0.00138 25-29 0.00112 30-34 2.7794 35-39 0.01704 40-44 3.27741 45-49 0.0 50-54 5.45E-4 55-59 2.79328 60-64 0.00629 65-69 0.004455 70-74 0.0 75-79 0.0 80-84 1.9999999999999998E-4 85-89 3.55E-4 90-94 0.007904999999999999 95-99 0.0 100-101 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.04099426080348203 #Duplication Level Relative count 1 100.0 2 0.022506076640692988 3 0.0015004051093795326 4 0.0 5 5.001350364598441E-4 6 0.0 7 0.0 8 5.001350364598441E-4 9 5.001350364598441E-4 10++ 0.0015004051093795326 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position TTTTT 260215 3.1330757 3.9985855 95-97 AAAAA 265670 3.0697207 3.6267743 1 >>END_MODULE