##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002002_Airport_GTGGCC_L002_R1_010.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 62 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.81047425 34.0 31.0 34.0 31.0 34.0 2 33.05028925 34.0 31.0 34.0 31.0 34.0 3 33.00382175 34.0 33.0 34.0 31.0 34.0 4 36.45019225 37.0 37.0 37.0 35.0 37.0 5 36.41746675 37.0 37.0 37.0 35.0 37.0 6 36.401781 37.0 37.0 37.0 35.0 37.0 7 36.402371 37.0 37.0 37.0 35.0 37.0 8 36.3932755 37.0 37.0 37.0 35.0 37.0 9 38.21128975 39.0 39.0 39.0 37.0 39.0 10-14 37.96756575 39.4 38.4 39.4 35.4 39.4 15-19 39.570873399999996 41.0 39.8 41.0 37.0 41.0 20-24 39.14402505 40.8 39.0 41.0 35.8 41.0 25-29 36.355180250000004 39.6 35.2 41.0 25.4 41.0 30-34 31.54202755 35.8 24.8 40.0 16.0 41.0 35-39 35.10139525 37.6 34.0 40.0 26.2 41.0 40-44 23.6139941 25.0 21.0 28.8 11.8 31.0 45-49 29.8077197 32.0 28.2 34.4 18.6 37.2 50-54 32.2814569 35.0 31.8 35.4 21.4 38.8 55-59 30.4023166 34.4 28.6 35.0 16.2 36.6 60-64 32.155680249999996 35.0 33.0 35.0 24.6 35.4 65-69 30.860664949999993 34.8 31.0 35.0 18.2 35.0 70-74 30.48245965 34.6 30.0 35.0 18.6 35.0 75-79 31.286735 34.4 32.2 35.0 24.0 35.0 80-84 31.814897050000003 35.0 33.0 35.0 25.4 35.0 85-89 29.922438749999998 34.2 28.6 35.0 18.2 35.0 90-94 30.48688785 34.4 31.0 35.0 20.8 35.0 95-99 30.3875678 34.8 31.8 35.0 15.8 35.0 100-101 27.473184375000002 33.5 27.0 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 88.0 3 21.0 4 54.0 5 177.0 6 556.0 7 1842.0 8 5360.0 9 9645.0 10 10673.0 11 11733.0 12 11869.0 13 9959.0 14 8701.0 15 9041.0 16 9536.0 17 9147.0 18 9883.0 19 11024.0 20 12698.0 21 15020.0 22 18823.0 23 24730.0 24 32474.0 25 42239.0 26 54272.0 27 71940.0 28 96571.0 29 128959.0 30 169581.0 31 241304.0 32 384279.0 33 641842.0 34 930233.0 35 759267.0 36 216489.0 37 36699.0 38 3248.0 39 23.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.6708647195542 19.009823903799152 17.8737943890838 28.445516987562858 2 31.59305 22.27945 20.38875 25.73875 3 29.689100000000003 20.356075 20.760175 29.19465 4 31.3025 19.336125000000003 19.425425 29.93595 5 31.481274999999997 19.1826 19.3256 30.010524999999998 6 30.86605 18.523500000000002 18.0474 32.56305 7 32.718225000000004 18.474125 18.38905 30.4186 8 30.344125 19.002225 19.1905 31.463150000000002 9 30.902225 18.05505 19.014425 32.0283 10-14 31.369345 18.895725 18.784575 30.950355000000002 15-19 31.19733 18.61252 18.77184 31.418309999999998 20-24 31.441075262580515 18.642226486756222 18.715613027873584 31.201085222789676 25-29 32.014321004346385 18.613570492674793 18.54016739506407 30.831941107914755 30-34 32.837564250738296 18.628118477582408 18.144398724978636 30.389918546700656 35-39 32.22211615389073 18.65436691849533 18.423009051440246 30.70050787617368 40-44 41.7895801944889 16.679677433890188 15.706879751598038 25.823862620022876 45-49 31.834475 18.604325 18.5927 30.9685 50-54 32.03360344032413 18.984137780965337 18.520877225052672 30.461381553657862 55-59 32.008340000000004 19.10922 18.49566 30.38678 60-64 31.72285966345963 18.640404077683563 18.46182651406484 31.17490974479196 65-69 31.63440320997999 19.064151892966265 18.496495547812 30.804949349241745 70-74 31.746413820642182 18.859478810833398 18.491773110597517 30.902334257926906 75-79 31.75024 18.550135 18.450525000000003 31.249100000000002 80-84 31.39586506611527 18.610937538984977 18.642303023581714 31.350894371318038 85-89 31.603489549449808 18.844541199120428 18.581490257273433 30.97047899415633 90-94 31.54511606635747 18.52499408329954 18.49552561406148 31.43436423628151 95-99 31.45838413589167 18.54330837993335 18.595293865997647 31.40301361817733 100-101 32.1563 19.04915 18.30385 30.490699999999997 >>END_MODULE >>Per base GC content warn #Base %GC 1 63.11638170711705 2 57.3318 3 58.88375 4 61.23845 5 61.4918 6 63.429100000000005 7 63.136824999999995 8 61.807275 9 62.930525 10-14 62.3197 15-19 62.61563999999999 20-24 62.64216048537019 25-29 62.846262112261144 30-34 63.22748279743895 35-39 62.92262403006442 40-44 67.61344281451177 45-49 62.802975 50-54 62.494984993981994 55-59 62.395120000000006 60-64 62.89776940825159 65-69 62.43935255922174 70-74 62.648748078569085 75-79 62.999340000000004 80-84 62.74675943743331 85-89 62.57396854360614 90-94 62.979480302638976 95-99 62.861397754069 100-101 62.647 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 1.5 2 5.0 3 7.0 4 4.0 5 3.0 6 5.5 7 9.0 8 11.5 9 11.0 10 19.5 11 31.0 12 42.5 13 48.0 14 65.0 15 87.0 16 101.5 17 146.0 18 184.0 19 213.0 20 281.5 21 362.0 22 467.5 23 619.5 24 790.0 25 992.5 26 1244.5 27 1522.0 28 1903.0 29 2405.0 30 2992.0 31 3567.5 32 4198.0 33 4983.5 34 5865.5 35 6787.0 36 7626.0 37 8560.0 38 9532.0 39 10417.0 40 11442.0 41 12500.0 42 13597.0 43 15004.5 44 16668.0 45 18810.0 46 21539.0 47 24837.0 48 29020.0 49 34547.5 50 41042.0 51 48520.0 52 57115.5 53 66791.0 54 77361.5 55 88511.5 56 100024.0 57 111811.0 58 124354.0 59 137364.0 60 150126.0 61 162994.0 62 175640.5 63 187235.0 64 197973.5 65 206412.5 66 211233.0 67 211645.0 68 207090.0 69 198120.0 70 184928.0 71 167588.5 72 146486.5 73 123553.5 74 100447.5 75 77771.5 76 57411.5 77 39995.5 78 26264.5 79 16518.5 80 9724.5 81 5460.0 82 3064.5 83 1825.5 84 1124.0 85 710.5 86 502.0 87 355.0 88 246.5 89 200.0 90 148.0 91 93.5 92 55.5 93 31.5 94 21.0 95 15.5 96 9.5 97 4.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0092 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-14 0.0 15-19 0.0 20-24 0.0021 25-29 0.004220000000000001 30-34 2.7608449999999998 35-39 0.012045 40-44 0.908995 45-49 0.0 50-54 1.1999999999999999E-4 55-59 0.0 60-64 0.018234999999999998 65-69 0.014329999999999999 70-74 0.00291 75-79 0.0 80-84 0.001545 85-89 0.017464999999999998 90-94 0.028739999999999998 95-99 9.350000000000001E-4 100-101 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.007499775006750133 #Duplication Level Relative count 1 100.0 2 0.003500157507087819 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 5.000225010125456E-4 10++ 5.000225010125456E-4 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position TTTTT 257280 3.1274142 4.0430436 95-97 >>END_MODULE