##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002002_Airport_GTGGCC_L002_R1_008.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 62 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.68132 34.0 31.0 34.0 31.0 34.0 2 32.9199505 34.0 31.0 34.0 31.0 34.0 3 32.96654225 34.0 31.0 34.0 31.0 34.0 4 36.39027825 37.0 37.0 37.0 35.0 37.0 5 36.32085175 37.0 37.0 37.0 35.0 37.0 6 36.28922825 37.0 37.0 37.0 35.0 37.0 7 36.2918795 37.0 37.0 37.0 35.0 37.0 8 36.262171 37.0 37.0 37.0 35.0 37.0 9 38.0551835 39.0 38.0 39.0 35.0 39.0 10-14 38.1944141 39.4 38.2 39.4 35.2 39.4 15-19 39.42911525 41.0 39.0 41.0 36.2 41.0 20-24 39.2114745 40.8 39.0 41.0 35.8 41.0 25-29 38.273372900000005 40.0 37.8 41.0 33.4 41.0 30-34 36.328489000000005 39.0 35.0 41.0 27.6 41.0 35-39 36.7012036 38.4 35.0 40.4 31.6 41.0 40-44 35.6266259 36.2 35.0 39.8 30.4 41.0 45-49 35.064851499999996 35.0 35.0 38.4 31.0 41.0 50-54 34.1926999 35.0 34.4 36.2 30.2 39.6 55-59 33.1467401 35.0 33.2 35.0 27.0 37.6 60-64 32.8519487 35.0 33.0 35.0 26.8 36.0 65-69 32.51704995 35.0 33.0 35.0 26.8 35.0 70-74 32.15743260000001 35.0 33.0 35.0 25.6 35.0 75-79 31.611573850000003 34.4 32.2 35.0 24.6 35.0 80-84 31.9619369 35.0 33.0 35.0 26.2 35.0 85-89 31.45976255 35.0 32.2 35.0 23.8 35.0 90-94 31.292884100000002 35.0 32.8 35.0 24.0 35.0 95-99 30.9333648 35.0 32.8 35.0 22.8 35.0 100-101 29.591691875000002 34.0 30.5 35.0 9.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 85.0 3 21.0 4 66.0 5 141.0 6 432.0 7 1218.0 8 2886.0 9 4584.0 10 5317.0 11 6025.0 12 6231.0 13 6692.0 14 7189.0 15 7575.0 16 8470.0 17 8985.0 18 9591.0 19 10244.0 20 11037.0 21 12461.0 22 14356.0 23 17193.0 24 21802.0 25 27688.0 26 34921.0 27 43625.0 28 54559.0 29 68500.0 30 86594.0 31 111883.0 32 150649.0 33 221389.0 34 385391.0 35 815423.0 36 1218241.0 37 517507.0 38 91234.0 39 9771.0 40 24.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 34.61972428335077 19.09943464283071 18.003504974382878 28.27733609943564 2 31.434 22.3825 20.456775 25.726725000000002 3 29.1549 20.5542 20.977375000000002 29.313525000000002 4 31.245525 19.412125 19.51605 29.8263 5 31.42395 19.202525 19.40075 29.972775000000002 6 30.810875 18.517325 18.06515 32.606649999999995 7 32.6513 18.50405 18.417275 30.427375 8 30.320425 19.055475 19.211475 31.412625 9 30.894775000000003 18.067825000000003 19.013275 32.024125 10-14 31.20389 18.884915 18.903005 31.008190000000003 15-19 31.18636 18.63307 18.774115 31.406455 20-24 31.155071095052207 18.665161244386415 18.818093507783914 31.361674152777464 25-29 31.414818140440044 18.7450477087495 18.805173968394637 31.034960182415823 30-34 32.0768358448427 18.658239395895198 18.358405909473817 30.906518849788284 35-39 31.336034623942922 18.684859686553338 18.708684601633315 31.270421087870425 40-44 31.652323190169586 18.67646096274776 18.5776809595406 31.093534887542052 45-49 31.50296 18.583175 18.544195 31.36967 50-54 31.394025 18.677585 18.661305 31.267085 55-59 31.638975000000002 18.744205 18.59565 31.021169999999998 60-64 31.558059720964664 18.622821147487528 18.53489721881257 31.284221912735237 65-69 31.460629772036334 18.706872472377732 18.63302707427913 31.199470681306803 70-74 31.56815 18.743775 18.578435 31.10964 75-79 31.499139999999997 18.60998 18.512715 31.378165000000003 80-84 31.316314697447208 18.61479779221967 18.67005780050867 31.398829709824454 85-89 31.517046589267068 18.778699706353823 18.6141356388737 31.090118065505408 90-94 31.49933461015776 18.54146186545879 18.529525702279688 31.429677822103763 95-99 31.404585 18.598835 18.62413 31.37245 100-101 31.744612500000002 18.697812499999998 18.5171 31.040475 >>END_MODULE >>Per base GC content warn #Base %GC 1 62.89706038278642 2 57.160725 3 58.468425 4 61.071825000000004 5 61.396724999999996 6 63.417525 7 63.078675 8 61.73305 9 62.9189 10-14 62.21208 15-19 62.592815 20-24 62.51674524782966 25-29 62.44977832285586 30-34 62.98335469463099 35-39 62.60645571181335 40-44 62.74585807771164 45-49 62.872629999999994 50-54 62.66111 55-59 62.660145 60-64 62.842281633699905 65-69 62.660100453343134 70-74 62.67779 75-79 62.87730499999999 80-84 62.71514440727166 85-89 62.607164654772475 90-94 62.92901243226152 95-99 62.777035000000005 100-101 62.7850875 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 6.0 1 7.0 2 7.5 3 6.0 4 7.5 5 13.0 6 15.5 7 16.5 8 20.5 9 29.0 10 35.5 11 46.5 12 58.5 13 80.0 14 106.5 15 128.5 16 169.0 17 211.0 18 239.0 19 298.5 20 423.5 21 511.0 22 601.5 23 809.0 24 1011.0 25 1275.0 26 1605.0 27 1965.5 28 2451.5 29 2984.5 30 3597.5 31 4298.0 32 5075.0 33 5948.0 34 6776.0 35 7598.0 36 8608.5 37 9461.5 38 10155.0 39 11025.0 40 11959.0 41 12980.5 42 14220.5 43 15577.0 44 17222.5 45 19412.0 46 22360.5 47 26156.0 48 30803.5 49 36490.5 50 43085.0 51 50874.5 52 59743.5 53 69180.0 54 79313.0 55 89653.0 56 100468.5 57 111793.0 58 123115.5 59 135478.0 60 148499.5 61 161218.5 62 172926.5 63 183655.5 64 193966.5 65 202290.5 66 206889.0 67 207360.0 68 204176.5 69 196055.5 70 182854.5 71 166090.5 72 146212.5 73 124702.0 74 101791.0 75 79203.5 76 58822.0 77 41030.0 78 26789.5 79 16289.0 80 9317.5 81 5080.5 82 2776.5 83 1512.5 84 868.0 85 588.0 86 418.0 87 306.0 88 217.5 89 162.5 90 109.5 91 83.5 92 62.5 93 36.0 94 28.5 95 22.5 96 12.0 97 5.5 98 4.0 99 2.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0278 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-14 0.0 15-19 0.0 20-24 0.00148 25-29 0.002095 30-34 0.041185 35-39 0.02063 40-44 0.005065 45-49 0.0 50-54 0.0 55-59 0.0 60-64 0.010155 65-69 0.0073100000000000005 70-74 0.0 75-79 0.0 80-84 1.4999999999999999E-5 85-89 0.00551 90-94 0.009745 95-99 0.0 100-101 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.11648427462293766 #Duplication Level Relative count 1 100.0 2 0.09960259066838845 3 0.0015015465929907805 4 5.005155309969269E-4 5 0.0 6 0.0 7 5.005155309969269E-4 8 0.0 9 0.0 10++ 0.0010010310619938537 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position TTTTT 297325 3.36858 3.9649656 95-97 AAAAA 300300 3.350233 3.793577 70-74 GATCG 1273965 3.0450754 4.363045 1 CGATC 1251880 3.026099 3.6091418 1 >>END_MODULE