##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002002_Airport_GTGGCC_L002_R1_007.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 62 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.71705475 34.0 31.0 34.0 31.0 34.0 2 32.954959 34.0 31.0 34.0 31.0 34.0 3 32.9741355 34.0 31.0 34.0 31.0 34.0 4 36.3992865 37.0 37.0 37.0 35.0 37.0 5 36.3369325 37.0 37.0 37.0 35.0 37.0 6 36.29828925 37.0 37.0 37.0 35.0 37.0 7 36.30498475 37.0 37.0 37.0 35.0 37.0 8 36.28891025 37.0 37.0 37.0 35.0 37.0 9 38.0797155 39.0 39.0 39.0 37.0 39.0 10-14 38.330410099999995 39.4 38.4 39.4 35.4 39.4 15-19 39.41534345 41.0 39.2 41.0 36.2 41.0 20-24 39.15157860000001 40.6 39.0 41.0 35.6 41.0 25-29 38.5208857 40.0 38.2 41.0 34.4 41.0 30-34 37.71722985 39.8 36.4 41.0 32.8 41.0 35-39 36.6099777 38.2 35.0 40.4 31.6 41.0 40-44 35.52688644999999 36.2 35.0 39.8 30.2 41.0 45-49 35.07097650000001 35.0 35.0 38.4 31.0 41.0 50-54 34.1891045 35.0 34.2 36.2 30.2 39.6 55-59 33.321117050000005 35.0 33.2 35.0 27.8 37.6 60-64 33.135882099999996 35.0 33.0 35.0 28.8 36.0 65-69 32.69182264999999 35.0 33.0 35.0 27.8 35.0 70-74 32.45930765 35.0 33.0 35.0 27.0 35.0 75-79 31.8153343 34.4 32.4 35.0 26.2 35.0 80-84 32.05843355 35.0 33.0 35.0 27.0 35.0 85-89 31.69161295 35.0 33.0 35.0 25.0 35.0 90-94 31.253641249999998 35.0 32.8 35.0 24.0 35.0 95-99 30.5731725 35.0 31.6 35.0 20.6 35.0 100-101 29.043288125 33.5 29.0 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 66.0 3 19.0 4 56.0 5 151.0 6 418.0 7 1221.0 8 2842.0 9 4649.0 10 5637.0 11 6396.0 12 6433.0 13 6720.0 14 7179.0 15 7718.0 16 8177.0 17 8968.0 18 9674.0 19 10619.0 20 11385.0 21 12750.0 22 14772.0 23 17476.0 24 21989.0 25 27619.0 26 34581.0 27 42636.0 28 53181.0 29 65709.0 30 82872.0 31 104119.0 32 139306.0 33 196168.0 34 325874.0 35 740421.0 36 1317713.0 37 587803.0 38 105145.0 39 11507.0 40 31.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 34.66053000014253 19.079970123509334 17.99866020893039 28.26083966741775 2 31.482775 22.40515 20.437875 25.674200000000003 3 29.250325 20.490875 20.95455 29.30425 4 31.28825 19.391775 19.473825 29.846149999999998 5 31.4356 19.200975 19.363975 29.99945 6 30.82425 18.579475000000002 18.04745 32.548825 7 32.634225 18.50355 18.418599999999998 30.443625 8 30.2654 19.0249 19.206475 31.503225 9 30.9215 18.0789 18.9999 31.999699999999997 10-14 31.10192009778414 18.875552369550935 18.940167463242823 31.082360069422098 15-19 31.220005 18.61361 18.77629 31.390095000000002 20-24 31.15922833245033 18.688010964850438 18.80719151308096 31.34556918961827 25-29 31.391112749394278 18.767368146095034 18.7137961532169 31.12772295129379 30-34 31.493161218137324 18.604900104904207 18.604414900439046 31.297523776519427 35-39 31.396112124974668 18.67202610747007 18.696500860467104 31.235360907088154 40-44 31.524801829173775 18.71796530818006 18.61372224343396 31.143510619212204 45-49 31.45054 18.54902 18.567005 31.433435 50-54 31.396735 18.65578 18.66461 31.282874999999997 55-59 31.500645 18.72623 18.599135 31.17399 60-64 31.448199370628565 18.532843477734723 18.554845975018164 31.464111176618548 65-69 31.355237796916104 18.654198350519422 18.650167860411827 31.340395992152647 70-74 31.42794 18.67457 18.59613 31.30136 75-79 31.450280000000003 18.55165 18.538774999999998 31.459294999999997 80-84 31.342660658809574 18.609928364524308 18.64438907441493 31.403021902251187 85-89 31.48317112859903 18.63485906106783 18.58825602488002 31.29371378545312 90-94 31.521493328639217 18.493819220900278 18.52322911764809 31.461458332812413 95-99 31.45128103740234 18.586245204716274 18.599615647277925 31.362858110603458 100-101 31.8522375 18.6915 18.480237499999998 30.976025 >>END_MODULE >>Per base GC content warn #Base %GC 1 62.92136966756028 2 57.156974999999996 3 58.554575 4 61.1344 5 61.435050000000004 6 63.373075 7 63.077850000000005 8 61.768625 9 62.9212 10-14 62.18428016720624 15-19 62.6101 20-24 62.5047975220686 25-29 62.51883570068807 30-34 62.79068499465675 35-39 62.63147303206282 40-44 62.66831244838599 45-49 62.88397500000001 50-54 62.67961 55-59 62.674635 60-64 62.91231054724711 65-69 62.69563378906875 70-74 62.7293 75-79 62.909575 80-84 62.745682561060754 85-89 62.776884914052154 90-94 62.98295166145164 95-99 62.8141391480058 100-101 62.8282625 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 6.0 1 6.0 2 5.0 3 4.0 4 9.0 5 11.5 6 11.0 7 14.5 8 20.0 9 28.5 10 36.0 11 44.0 12 62.0 13 83.5 14 99.0 15 129.0 16 166.5 17 209.5 18 262.0 19 318.0 20 403.5 21 520.5 22 650.5 23 818.5 24 1007.5 25 1266.0 26 1610.0 27 1990.5 28 2436.5 29 2989.0 30 3671.0 31 4374.0 32 5126.5 33 5948.0 34 6783.0 35 7673.5 36 8566.0 37 9439.5 38 10270.0 39 10963.5 40 11746.0 41 12890.0 42 14144.5 43 15619.5 44 17378.5 45 19527.5 46 22380.5 47 26113.5 48 31029.0 49 36554.5 50 43160.0 51 51134.0 52 59775.5 53 69202.5 54 79342.0 55 90036.0 56 100801.5 57 112035.5 58 123688.5 59 135595.5 60 147649.5 61 159856.0 62 172067.0 63 183104.5 64 192658.5 65 200329.5 66 205457.0 67 206753.0 68 202927.5 69 194952.5 70 183135.5 71 166725.0 72 147075.0 73 125342.5 74 102263.5 75 79843.0 76 59323.0 77 41674.0 78 27695.5 79 17223.5 80 9952.0 81 5475.0 82 3055.0 83 1717.0 84 1035.5 85 713.5 86 533.5 87 374.0 88 259.0 89 198.5 90 154.5 91 103.5 92 70.5 93 48.5 94 30.0 95 20.5 96 10.0 97 4.0 98 3.5 99 1.5 100 0.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.021725 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-14 1.45E-4 15-19 0.0 20-24 4.6E-4 25-29 0.00372 30-34 0.04214 35-39 0.01942 40-44 0.00294 45-49 0.0 50-54 0.0 55-59 0.0 60-64 0.011349999999999999 65-69 0.01216 70-74 0.0 75-79 0.0 80-84 0.0020599999999999998 85-89 0.006515 90-94 0.01665 95-99 0.00331 100-101 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.1729507090479252 #Duplication Level Relative count 1 100.0 2 0.13970186920099545 3 0.0015021706365698434 4 0.0015021706365698434 5 5.007235455232812E-4 6 0.0 7 0.0 8 0.0 9 0.0 10++ 0.0015021706365698434 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position AAAAA 290265 3.263249 3.582225 65-69 TTTTT 287000 3.2403905 3.6977751 95-97 GATCG 1278150 3.0615554 4.3043118 1 CGATC 1264420 3.050501 3.4589114 1 >>END_MODULE