##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002002_Airport_GTGGCC_L002_R1_005.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 62 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.88196425 34.0 31.0 34.0 31.0 34.0 2 33.09709425 34.0 33.0 34.0 31.0 34.0 3 33.13619325 34.0 33.0 34.0 31.0 34.0 4 36.491758 37.0 37.0 37.0 35.0 37.0 5 36.43295075 37.0 37.0 37.0 35.0 37.0 6 36.41113275 37.0 37.0 37.0 35.0 37.0 7 36.3942955 37.0 37.0 37.0 35.0 37.0 8 36.3757745 37.0 37.0 37.0 35.0 37.0 9 38.178439 39.0 39.0 39.0 37.0 39.0 10-14 38.443691050000005 39.4 39.2 39.4 37.0 39.4 15-19 39.59037335000001 41.0 40.0 41.0 37.0 41.0 20-24 39.3324514 41.0 39.2 41.0 36.2 41.0 25-29 38.839354050000004 40.0 38.4 41.0 35.0 41.0 30-34 37.99780465 40.0 37.0 41.0 33.4 41.0 35-39 36.91384885 38.6 35.0 40.4 32.4 41.0 40-44 36.024814049999996 36.6 35.0 40.0 31.8 41.0 45-49 35.350109450000005 35.0 35.0 38.4 31.8 41.0 50-54 34.4435383 35.0 34.6 36.2 31.0 39.6 55-59 33.75649115 35.0 34.0 35.0 30.2 38.0 60-64 33.25018145 35.0 33.4 35.0 29.4 36.2 65-69 32.843204650000004 35.0 33.0 35.0 29.0 35.0 70-74 32.531987349999994 35.0 33.0 35.0 27.8 35.0 75-79 31.7961005 34.4 32.2 35.0 26.2 35.0 80-84 32.077242950000006 35.0 33.0 35.0 27.0 35.0 85-89 31.683210350000003 35.0 33.0 35.0 25.2 35.0 90-94 31.1925885 35.0 32.6 35.0 23.8 35.0 95-99 30.539681350000002 34.8 31.6 35.0 20.2 35.0 100-101 29.078679375 33.5 29.0 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 62.0 3 21.0 4 59.0 5 110.0 6 360.0 7 1070.0 8 2509.0 9 4001.0 10 5070.0 11 5744.0 12 5764.0 13 6056.0 14 6742.0 15 7210.0 16 7983.0 17 8726.0 18 9635.0 19 10235.0 20 11091.0 21 12529.0 22 14288.0 23 17050.0 24 21067.0 25 25851.0 26 32263.0 27 39698.0 28 48516.0 29 59601.0 30 74654.0 31 94660.0 32 126187.0 33 177184.0 34 299349.0 35 729819.0 36 1374794.0 37 631124.0 38 115909.0 39 12978.0 40 31.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 34.62642679435408 19.05019565679423 17.947566479552926 28.375811069298763 2 31.566899999999997 22.284825 20.425525 25.72275 3 29.2039 20.494625 20.913999999999998 29.387475000000002 4 31.322775000000004 19.33955 19.443325 29.894349999999996 5 31.46235 19.199775 19.320024999999998 30.017850000000003 6 30.84965 18.514125 18.03705 32.599175 7 32.681625 18.500025 18.41215 30.4062 8 30.317675 19.0301 19.203975 31.44825 9 30.8885 18.085075 19.012974999999997 32.01345 10-14 31.115256555762826 18.85962094298105 18.915935945796797 31.109186555459328 15-19 31.20174 18.62274 18.781695000000003 31.393824999999996 20-24 31.129965 18.679875000000003 18.78556 31.4046 25-29 31.282129361980438 18.748406813662328 18.731786173767688 31.237677650589546 30-34 31.360391619226085 18.60796687530365 18.616782170210534 31.414859335259727 35-39 31.259945985255012 18.654720199200252 18.723956408542545 31.361377407002195 40-44 31.369238380885307 18.672859761111358 18.648169384583117 31.309732473420222 45-49 31.433404999999997 18.53474 18.544135 31.487720000000003 50-54 31.29558987669799 18.618302265954405 18.68243753211576 31.403670325231847 55-59 31.419655000000002 18.63616 18.62122 31.322965000000003 60-64 31.452747064863505 18.507618231693467 18.554178441152384 31.485456262290647 65-69 31.32713924288451 18.615689962875372 18.657752101093593 31.399418693146526 70-74 31.428115000000002 18.646515 18.597435 31.327935 75-79 31.483665 18.50015 18.51949 31.496695000000003 80-84 31.33712071511891 18.579448811842056 18.64704824636496 31.43638222667407 85-89 31.468440421285898 18.609192938180318 18.58139778461072 31.34096885592307 90-94 31.5458310772346 18.46808948764467 18.48677031037932 31.49930912474142 95-99 31.45775353306218 18.544491903675265 18.590890928285553 31.406863634977 100-101 31.7633004229055 18.565016345212488 18.4698276077589 31.201855624123116 >>END_MODULE >>Per base GC content warn #Base %GC 1 63.002237863652844 2 57.28965 3 58.591375 4 61.217124999999996 5 61.480199999999996 6 63.448825 7 63.087824999999995 8 61.765924999999996 9 62.90194999999999 10-14 62.22444311122216 15-19 62.595565 20-24 62.534565 25-29 62.519807012569984 30-34 62.77525095448582 35-39 62.62132339225721 40-44 62.678970854305526 45-49 62.921125 50-54 62.69926020192984 55-59 62.74262 60-64 62.93820332715415 65-69 62.726557936031035 70-74 62.756049999999995 75-79 62.980360000000005 80-84 62.773502941792984 85-89 62.809409277208964 90-94 63.04514020197601 95-99 62.86461716803918 100-101 62.965156047028614 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 8.0 1 6.0 2 8.0 3 7.5 4 9.0 5 11.0 6 7.5 7 12.0 8 19.5 9 25.0 10 33.5 11 41.5 12 56.5 13 76.0 14 94.0 15 126.5 16 149.0 17 187.0 18 246.5 19 310.0 20 395.5 21 522.0 22 645.5 23 770.5 24 1016.0 25 1301.0 26 1641.0 27 2028.5 28 2493.5 29 3092.0 30 3694.5 31 4349.0 32 5143.5 33 5999.5 34 6767.5 35 7540.5 36 8448.5 37 9436.0 38 10267.0 39 10961.5 40 11756.0 41 12758.5 42 13955.0 43 15442.5 44 17180.5 45 19423.0 46 22550.5 47 26397.5 48 31004.0 49 36654.0 50 43282.5 51 50977.0 52 59875.5 53 69518.5 54 79472.0 55 90051.0 56 100944.0 57 112057.0 58 123298.5 59 134965.5 60 147142.5 61 159092.0 62 171240.5 63 182829.5 64 192459.5 65 199927.5 66 204676.0 67 205711.0 68 202287.5 69 194466.0 70 182575.5 71 166835.0 72 147371.5 73 125440.5 74 102905.0 75 80993.5 76 60510.5 77 42575.0 78 28270.0 79 17522.5 80 10268.0 81 5867.0 82 3371.5 83 1997.0 84 1262.0 85 825.0 86 587.0 87 426.5 88 314.5 89 240.5 90 166.5 91 109.5 92 74.0 93 56.5 94 39.0 95 25.0 96 15.5 97 12.0 98 4.5 99 1.0 100 0.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.01625 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-14 4.9999999999999996E-6 15-19 0.0 20-24 0.0 25-29 0.00385 30-34 0.060065 35-39 0.01619 40-44 0.0015249999999999999 45-49 0.0 50-54 4.15E-4 55-59 0.0 60-64 0.043405 65-69 0.040745 70-74 0.0 75-79 0.0 80-84 0.00656 85-89 0.03653 90-94 0.05793499999999999 95-99 0.019450000000000002 100-101 0.0013 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.16745729838890255 #Duplication Level Relative count 1 100.0 2 0.13819623865889563 3 0.0020028440385347194 4 0.0 5 5.007110096336799E-4 6 5.007110096336799E-4 7 0.0 8 0.0 9 0.0 10++ 0.0010014220192673597 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position AAAAA 282725 3.2032683 3.7689612 1 TTTTT 281160 3.1803982 3.5388932 95-97 GATCG 1274565 3.0598316 4.2036977 1 CGATC 1267365 3.052793 3.5941122 1 >>END_MODULE