##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002002_Airport_GTGGCC_L002_R1_004.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 62 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.87524625 34.0 31.0 34.0 31.0 34.0 2 33.094653 34.0 33.0 34.0 31.0 34.0 3 33.1158345 34.0 33.0 34.0 31.0 34.0 4 36.48760025 37.0 37.0 37.0 35.0 37.0 5 36.4308505 37.0 37.0 37.0 35.0 37.0 6 36.39334125 37.0 37.0 37.0 35.0 37.0 7 36.387262 37.0 37.0 37.0 35.0 37.0 8 36.37542925 37.0 37.0 37.0 35.0 37.0 9 38.16759475 39.0 39.0 39.0 37.0 39.0 10-14 38.449160649999996 39.4 39.2 39.4 37.0 39.4 15-19 39.5984829 41.0 40.0 41.0 37.0 41.0 20-24 39.370559199999995 41.0 39.2 41.0 36.4 41.0 25-29 38.89168865 40.0 38.4 41.0 35.0 41.0 30-34 38.125415849999996 40.0 37.0 41.0 33.8 41.0 35-39 37.0476158 38.6 35.0 40.4 32.8 41.0 40-44 36.159551949999994 36.6 35.0 40.0 32.2 41.0 45-49 35.48261005 35.0 35.0 38.4 32.4 41.0 50-54 34.6302646 35.0 35.0 36.2 31.4 39.6 55-59 33.9905718 35.0 34.2 35.0 31.0 38.0 60-64 33.533552 35.0 34.0 35.0 30.2 36.2 65-69 33.164070499999994 35.0 33.2 35.0 29.4 35.0 70-74 32.91411895 35.0 33.0 35.0 29.0 35.0 75-79 32.2254642 34.4 32.6 35.0 27.6 35.0 80-84 32.5350767 35.0 33.0 35.0 28.6 35.0 85-89 32.23713454999999 35.0 33.0 35.0 27.0 35.0 90-94 31.849753050000004 35.0 33.0 35.0 26.6 35.0 95-99 31.317704300000003 35.0 33.0 35.0 24.2 35.0 100-101 29.986189500000002 34.0 31.0 35.0 20.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 60.0 3 20.0 4 49.0 5 102.0 6 341.0 7 858.0 8 1995.0 9 3029.0 10 3790.0 11 4232.0 12 4493.0 13 4648.0 14 5152.0 15 5515.0 16 6031.0 17 6829.0 18 7319.0 19 7844.0 20 8525.0 21 9740.0 22 11471.0 23 14416.0 24 17777.0 25 22382.0 26 28240.0 27 35370.0 28 44333.0 29 54959.0 30 68666.0 31 88124.0 32 116845.0 33 164975.0 34 276483.0 35 710117.0 36 1460945.0 37 674310.0 38 117334.0 39 12658.0 40 23.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 34.72717403018117 19.06242491025486 17.90349556593883 28.30690549362514 2 31.488899999999997 22.359125 20.34835 25.803625000000004 3 29.243625 20.439875 20.913 29.403499999999998 4 31.30715 19.334625 19.386475 29.971750000000004 5 31.495325 19.1746 19.3329 29.997175 6 30.838275 18.52545 18.046475 32.589800000000004 7 32.711475 18.44305 18.4106 30.434875 8 30.313449999999996 19.011775 19.1855 31.489275 9 30.9198 18.0545 18.982425 32.043275 10-14 31.11714622342924 18.838968767793755 18.908633781726756 31.135251227050247 15-19 31.23112 18.594555 18.742745 31.431579999999997 20-24 31.140103508227718 18.662591057700325 18.799966359925993 31.397339074145965 25-29 31.286629884155392 18.74478555251918 18.730580355066937 31.238004208258495 30-34 31.357630018656206 18.582918799587997 18.631909795722407 31.427541386033386 35-39 31.243004927931377 18.659296607058735 18.71595731593271 31.381741149077175 40-44 31.36098775214975 18.705070827908035 18.644884843867196 31.28905657607502 45-49 31.426675 18.53476 18.580355 31.458209999999998 50-54 31.288381717945956 18.633460465514887 18.678280647036622 31.39987716950254 55-59 31.407365 18.6498 18.64378 31.299055 60-64 31.44572042538862 18.506353195610338 18.582453324537497 31.46547305446355 65-69 31.309047302054683 18.615404857956406 18.675277014997896 31.40027082499102 70-74 31.409165 18.667635 18.616455000000002 31.306745000000003 75-79 31.45465 18.53835 18.54161 31.46539 80-84 31.33297208141359 18.623853197246998 18.658149961815536 31.385024759523876 85-89 31.40318034234946 18.67290476175236 18.62362321716324 31.300291678734936 90-94 31.49256392399761 18.51162953525619 18.530458842460213 31.465347698285985 95-99 31.393242059510428 18.606307908492294 18.611303263662045 31.38914676833523 100-101 31.651841172166158 18.676748052927277 18.499647123147398 31.17176365175917 >>END_MODULE >>Per base GC content warn #Base %GC 1 63.034079523806305 2 57.292525000000005 3 58.647125 4 61.2789 5 61.49250000000001 6 63.42807499999999 7 63.14635 8 61.802725 9 62.963075 10-14 62.25239745047949 15-19 62.6627 20-24 62.53744258237368 25-29 62.52463409241389 30-34 62.7851714046896 35-39 62.62474607700855 40-44 62.650044328224766 45-49 62.884885000000004 50-54 62.68825888744849 55-59 62.706419999999994 60-64 62.911193479852166 65-69 62.7093181270457 70-74 62.715909999999994 75-79 62.92004 80-84 62.71799684093746 85-89 62.70347202108441 90-94 62.9579116222836 95-99 62.78238882784566 100-101 62.82360482392533 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 6.0 1 6.0 2 4.5 3 4.0 4 8.0 5 9.5 6 10.5 7 11.0 8 13.5 9 27.0 10 37.0 11 48.0 12 56.0 13 67.0 14 87.5 15 104.5 16 142.0 17 206.0 18 275.5 19 319.0 20 379.0 21 482.0 22 626.0 23 811.0 24 1002.0 25 1262.0 26 1601.0 27 1963.5 28 2407.5 29 2960.5 30 3529.0 31 4240.0 32 5039.0 33 5869.5 34 6806.5 35 7621.5 36 8347.5 37 9244.5 38 10097.5 39 10865.5 40 11717.5 41 12762.5 42 13941.5 43 15130.0 44 17012.0 45 19474.0 46 22445.0 47 26225.5 48 30700.0 49 36216.0 50 43150.0 51 51208.0 52 59829.5 53 69141.5 54 79362.5 55 90001.0 56 100907.5 57 112180.0 58 123558.5 59 135564.5 60 147778.5 61 159415.5 62 172005.5 63 183705.0 64 193204.0 65 201183.0 66 205894.0 67 207065.0 68 203975.0 69 196205.0 70 183824.0 71 167249.0 72 147669.5 73 125833.5 74 102886.5 75 80481.0 76 59699.5 77 41557.5 78 27160.5 79 16432.5 80 9162.5 81 4819.5 82 2449.5 83 1270.0 84 677.0 85 412.5 86 288.0 87 189.5 88 122.0 89 84.0 90 59.5 91 41.0 92 29.5 93 21.5 94 13.0 95 7.5 96 4.0 97 1.5 98 1.5 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.015475 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-14 1.9999999999999998E-5 15-19 0.0 20-24 2.2E-4 25-29 0.0013900000000000002 30-34 0.073475 35-39 0.0189 40-44 0.0016350000000000002 45-49 0.0 50-54 4.0500000000000003E-4 55-59 0.0 60-64 0.01331 65-69 0.020305 70-74 0.0 75-79 0.0 80-84 0.005144999999999999 85-89 0.01328 90-94 0.022875 95-99 0.007109999999999999 100-101 5.25E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.1714605640702648 #Duplication Level Relative count 1 100.0 2 0.1402082091906481 3 0.003505205229766203 4 0.001502230812756944 5 0.0010014872085046293 6 0.0 7 0.0010014872085046293 8 0.0 9 0.0 10++ 0.001502230812756944 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position TTTTT 280110 3.147089 3.387456 10-14 AAAAA 274045 3.089948 3.4941201 1 GATCG 1284835 3.0830295 4.340571 1 CGATC 1273090 3.0660357 3.5797794 1 >>END_MODULE